RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 USP17L7P0C7H9 530 aa5.65□□□□□ -1.5
CALD1-224ENST00000498254 EPB42P16452 691 aa5.65□□□□□ -1.5
CALD1-224ENST00000498254 PDE12Q6L8Q7 609 aaKnown RBP5.65□□□□□ -1.5
CALD1-224ENST00000498254 NXPE4Q6UWF7 544 aa5.65□□□□□ -1.5
CALD1-224ENST00000498254 CCDC155Q8N6L0 562 aa5.65□□□□□ -1.5
CALD1-224ENST00000498254 C1orf127Q8N9H9 656 aa5.65□□□□□ -1.5
CALD1-224ENST00000498254 CNTN3Q9P232 1028 aa5.65□□□□□ -1.5
CALD1-224ENST00000498254 KANSL3Q9P2N6 904 aa5.65□□□□□ -1.5
CALD1-224ENST00000498254 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.65□□□□□ -1.5
CALD1-224ENST00000498254 ARHGEF15O94989 841 aa5.64□□□□□ -1.51
CALD1-224ENST00000498254 DNAJA1P31689 397 aaKnown RBP5.64□□□□□ -1.51
CALD1-224ENST00000498254 USP48Q86UV5 1035 aa5.64□□□□□ -1.51
CALD1-224ENST00000498254 WHAMMQ8TF30 809 aa5.64□□□□□ -1.51
CALD1-224ENST00000498254 UBXN4Q92575 508 aa5.64□□□□□ -1.51
CALD1-224ENST00000498254 FRMD6Q96NE9 622 aa5.64□□□□□ -1.51
CALD1-224ENST00000498254 ZCCHC2Q9C0B9 1178 aaKnown RBP5.64□□□□□ -1.51
CALD1-224ENST00000498254 CHRDQ9H2X0 955 aa5.64□□□□□ -1.51
CALD1-224ENST00000498254 BRD7Q9NPI1 651 aa5.64□□□□□ -1.51
CALD1-224ENST00000498254 GGT7Q9UJ14 662 aa5.64□□□□□ -1.51
CALD1-224ENST00000498254 GPC6Q9Y625 555 aaPredicted RBP5.64□□□□□ -1.51
CALD1-224ENST00000498254 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.64□□□□□ -1.51
CALD1-224ENST00000498254 SLC35F4A4IF30 521 aa5.63□□□□□ -1.51
CALD1-224ENST00000498254 F6X3S4 739 aa5.63□□□□□ -1.51
CALD1-224ENST00000498254 CYP2E1P05181 493 aaPredicted RBP5.63□□□□□ -1.51
CALD1-224ENST00000498254 RACK1P63244 317 aaKnown RBP5.63□□□□□ -1.51
CALD1-224ENST00000498254 XKR5Q6UX68 686 aa5.63□□□□□ -1.51
CALD1-224ENST00000498254 HS2ST1Q7LGA3 356 aa5.63□□□□□ -1.51
CALD1-224ENST00000498254 PGBD3Q8N328 593 aa5.63□□□□□ -1.51
CALD1-224ENST00000498254 VWA5B2Q8N398 1253 aa5.63□□□□□ -1.51
CALD1-224ENST00000498254 DHX38Q92620 1227 aaKnown RBP5.63□□□□□ -1.51
CALD1-224ENST00000498254 DNAJC2Q99543 621 aaKnown RBP5.63□□□□□ -1.51
CALD1-224ENST00000498254 BCO2Q9BYV7 579 aa5.63□□□□□ -1.51
CALD1-224ENST00000498254 LATS2Q9NRM7 1088 aa5.63□□□□□ -1.51
CALD1-224ENST00000498254 ABI2Q9NYB9 513 aaPredicted RBP5.63□□□□□ -1.51
CALD1-224ENST00000498254 PRKAG2Q9UGJ0 569 aa5.63□□□□□ -1.51
CALD1-224ENST00000498254 INPP5FQ9Y2H2 1132 aa5.63□□□□□ -1.51
CALD1-224ENST00000498254 SASH3O75995 380 aa5.62□□□□□ -1.51
CALD1-224ENST00000498254 CES1P23141 567 aa5.62□□□□□ -1.51
CALD1-224ENST00000498254 GTF2F1P35269 517 aaKnown RBP eCLIP5.62□□□□□ -1.51
CALD1-224ENST00000498254 WDR44Q5JSH3 913 aa5.62□□□□□ -1.51
CALD1-224ENST00000498254 TTC39BQ5VTQ0 682 aaPredicted RBP5.62□□□□□ -1.51
CALD1-224ENST00000498254 SV2AQ7L0J3 742 aa5.62□□□□□ -1.51
CALD1-224ENST00000498254 SCARF2Q96GP6 870 aaPredicted RBP5.62□□□□□ -1.51
CALD1-224ENST00000498254 FAM8A1Q9UBU6 413 aa5.62□□□□□ -1.51
CALD1-224ENST00000498254 DCDC2BA2VCK2 349 aa5.61□□□□□ -1.51
CALD1-224ENST00000498254 ITGA6P23229 1130 aa5.61□□□□□ -1.51
CALD1-224ENST00000498254 GNL2Q13823 731 aaKnown RBP5.61□□□□□ -1.51
CALD1-224ENST00000498254 GRM2Q14416 872 aa5.61□□□□□ -1.51
CALD1-224ENST00000498254 TAF1CQ15572 869 aaPredicted RBP5.61□□□□□ -1.51
CALD1-224ENST00000498254 RIPOR1Q6ZS17 1223 aa5.61□□□□□ -1.51
CALD1-224ENST00000498254 NLRP13Q86W25 1043 aa5.61□□□□□ -1.51
CALD1-224ENST00000498254 GALNT12Q8IXK2 581 aa5.61□□□□□ -1.51
CALD1-224ENST00000498254 COPRSQ9NQ92 184 aa5.61□□□□□ -1.51
CALD1-224ENST00000498254 DDX41Q9UJV9 622 aaKnown RBP5.61□□□□□ -1.51
CALD1-224ENST00000498254 TTF2Q9UNY4 1162 aaKnown RBP5.61□□□□□ -1.51
CALD1-224ENST00000498254 USP31Q70CQ4 1352 aa5.6□□□□□ -1.51
CALD1-224ENST00000498254 CDC14CA4D256 554 aa5.6□□□□□ -1.51
CALD1-224ENST00000498254 KHNYNO15037 678 aaKnown RBP5.6□□□□□ -1.51
CALD1-224ENST00000498254 F11P03951 625 aa5.6□□□□□ -1.51
CALD1-224ENST00000498254 TARSP26639 723 aaKnown RBP5.6□□□□□ -1.51
CALD1-224ENST00000498254 SFSWAPQ12872 951 aaKnown RBP5.6□□□□□ -1.51
CALD1-224ENST00000498254 GRIN2CQ14957 1233 aa5.6□□□□□ -1.51
CALD1-224ENST00000498254 ZNF654Q8IZM8 581 aa5.6□□□□□ -1.51
CALD1-224ENST00000498254 FAM177A1Q8N128 213 aaPredicted RBP5.6□□□□□ -1.51
CALD1-224ENST00000498254 EHD4Q9H223 541 aa5.6□□□□□ -1.51
CALD1-224ENST00000498254 CRISPLD1Q9H336 500 aa5.6□□□□□ -1.51
CALD1-224ENST00000498254 SUV39H2Q9H5I1 410 aa5.6□□□□□ -1.51
CALD1-224ENST00000498254 PHF20L1A8MW92 1017 aa5.59□□□□□ -1.51
CALD1-224ENST00000498254 GIPC1O14908 333 aa5.59□□□□□ -1.51
CALD1-224ENST00000498254 SMARCA5O60264 1052 aaPredicted RBP5.59□□□□□ -1.51
CALD1-224ENST00000498254 MMP20O60882 483 aa5.59□□□□□ -1.51
CALD1-224ENST00000498254 FBXO24O75426 580 aa5.59□□□□□ -1.51
CALD1-224ENST00000498254 RARAP10276 462 aa5.59□□□□□ -1.51
CALD1-224ENST00000498254 ACPPP15309 386 aa5.59□□□□□ -1.51
CALD1-224ENST00000498254 ATP2B1P20020 1258 aa5.59□□□□□ -1.51
CALD1-224ENST00000498254 FCGRTP55899 365 aa5.59□□□□□ -1.51
CALD1-224ENST00000498254 EFHC2Q5JST6 749 aa5.59□□□□□ -1.51
CALD1-224ENST00000498254 RAB44Q7Z6P3 723 aaPredicted RBP5.59□□□□□ -1.51
CALD1-224ENST00000498254 PMFBP1Q8TBY8 1022 aa5.59□□□□□ -1.51
CALD1-224ENST00000498254 SRA1Q9HD15 236 aaKnown RBP5.59□□□□□ -1.51
CALD1-224ENST00000498254 KCNH4Q9UQ05 1017 aa5.59□□□□□ -1.51
CALD1-224ENST00000498254 DYRK1BQ9Y463 629 aa5.59□□□□□ -1.51
CALD1-224ENST00000498254 SENP3-EIF4A1A0A087X0R7 540 aa5.58□□□□□ -1.52
CALD1-224ENST00000498254 A0A1W2PP55 124 aa5.58□□□□□ -1.52
CALD1-224ENST00000498254 ATXN7O15265 892 aaPredicted RBP5.58□□□□□ -1.52
CALD1-224ENST00000498254 TRPA1O75762 1119 aa5.58□□□□□ -1.52
CALD1-224ENST00000498254 ADAMTS2O95450 1211 aa5.58□□□□□ -1.52
CALD1-224ENST00000498254 PTPN12Q05209 780 aaKnown RBP5.58□□□□□ -1.52
CALD1-224ENST00000498254 MAP3K11Q16584 847 aa5.58□□□□□ -1.52
CALD1-224ENST00000498254 PLA2G4EQ3MJ16 856 aa5.58□□□□□ -1.52
CALD1-224ENST00000498254 DPH6Q7L8W6 267 aa5.58□□□□□ -1.52
CALD1-224ENST00000498254 PNMA5Q96PV4 448 aa5.58□□□□□ -1.52
CALD1-224ENST00000498254 TRIM56Q9BRZ2 755 aaKnown RBP5.58□□□□□ -1.52
CALD1-224ENST00000498254 STRN4Q9NRL3 753 aa5.58□□□□□ -1.52
CALD1-224ENST00000498254 KBTBD4Q9NVX7 518 aa5.58□□□□□ -1.52
CALD1-224ENST00000498254 EGFRP00533 1210 aa5.57□□□□□ -1.52
CALD1-224ENST00000498254 NFKB1P19838 968 aa5.57□□□□□ -1.52
CALD1-224ENST00000498254 GSTT1P30711 240 aa5.57□□□□□ -1.52
CALD1-224ENST00000498254 MAP3K10Q02779 954 aa5.57□□□□□ -1.52
CALD1-224ENST00000498254 ARID5AQ03989 594 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms