RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 NUTM2GQ5VZR2 741 aa11.17□□□□□ -0.62
VPS45-210ENST00000497638 BANK1Q8NDB2 785 aa11.17□□□□□ -0.62
VPS45-210ENST00000497638 NUDT16Q96DE0 195 aaKnown RBP11.17□□□□□ -0.62
VPS45-210ENST00000497638 MTFR1LQ9H019 292 aa11.17□□□□□ -0.62
VPS45-210ENST00000497638 STK32BQ9NY57 414 aa11.17□□□□□ -0.62
VPS45-210ENST00000497638 MCCD1P59942 119 aaPredicted RBP11.16□□□□□ -0.62
VPS45-210ENST00000497638 NR1H3Q13133 447 aa11.16□□□□□ -0.62
VPS45-210ENST00000497638 DDB1Q16531 1140 aa11.16□□□□□ -0.62
VPS45-210ENST00000497638 RNFT1Q5M7Z0 435 aa11.16□□□□□ -0.62
VPS45-210ENST00000497638 TOPAZ1Q8N9V7 1692 aa11.16□□□□□ -0.62
VPS45-210ENST00000497638 AATKQ6ZMQ8 1374 aa11.16□□□□□ -0.62
VPS45-210ENST00000497638 RNF144AP50876 292 aaPredicted RBP11.15□□□□□ -0.62
VPS45-210ENST00000497638 SLC15A2Q16348 729 aa11.15□□□□□ -0.62
VPS45-210ENST00000497638 CC2D2BQ6DHV5 1058 aa11.15□□□□□ -0.62
VPS45-210ENST00000497638 ZNF592Q92610 1267 aa11.15□□□□□ -0.62
VPS45-210ENST00000497638 NDUFB9Q9Y6M9 179 aa11.15□□□□□ -0.62
VPS45-210ENST00000497638 RHOQP17081 205 aa11.14□□□□□ -0.63
VPS45-210ENST00000497638 ABTB2Q8N961 1025 aa11.14□□□□□ -0.63
VPS45-210ENST00000497638 AKAP12Q02952 1782 aa11.13□□□□□ -0.63
VPS45-210ENST00000497638 ACEP12821 1306 aa11.13□□□□□ -0.63
VPS45-210ENST00000497638 ARHGEF28Q8N1W1 1705 aaKnown RBP11.13□□□□□ -0.63
VPS45-210ENST00000497638 APBB1O00213 710 aa11.13□□□□□ -0.63
VPS45-210ENST00000497638 GCP02774 474 aa11.13□□□□□ -0.63
VPS45-210ENST00000497638 TXNRD1Q16881 649 aa11.13□□□□□ -0.63
VPS45-210ENST00000497638 NLRP13Q86W25 1043 aa11.13□□□□□ -0.63
VPS45-210ENST00000497638 SVOPQ8N4V2 548 aa11.13□□□□□ -0.63
VPS45-210ENST00000497638 ARXQ96QS3 562 aa11.13□□□□□ -0.63
VPS45-210ENST00000497638 CDCA7Q9BWT1 371 aaPredicted RBP11.13□□□□□ -0.63
VPS45-210ENST00000497638 WNK3Q9BYP7 1800 aa11.13□□□□□ -0.63
VPS45-210ENST00000497638 A0A1W2PRU2 124 aa11.12□□□□□ -0.63
VPS45-210ENST00000497638 ERVK-9P63128 1117 aa11.12□□□□□ -0.63
VPS45-210ENST00000497638 PTF1AQ7RTS3 328 aa11.12□□□□□ -0.63
VPS45-210ENST00000497638 NLRP3Q96P20 1036 aa11.12□□□□□ -0.63
VPS45-210ENST00000497638 PCDHB11Q9Y5F2 797 aa11.12□□□□□ -0.63
VPS45-210ENST00000497638 BRD4O60885 1362 aaPredicted RBP11.12□□□□□ -0.63
VPS45-210ENST00000497638 GPR162Q16538 588 aa11.11□□□□□ -0.63
VPS45-210ENST00000497638 SLC27A3Q5K4L6 730 aa11.11□□□□□ -0.63
VPS45-210ENST00000497638 MTMR14Q8NCE2 650 aa11.11□□□□□ -0.63
VPS45-210ENST00000497638 ADAMTS8Q9UP79 889 aa11.11□□□□□ -0.63
VPS45-210ENST00000497638 GPC1P35052 558 aa11.1□□□□□ -0.63
VPS45-210ENST00000497638 ZNF385CQ66K41 422 aaPredicted RBP11.1□□□□□ -0.63
VPS45-210ENST00000497638 TOM1L2Q6ZVM7 507 aa11.1□□□□□ -0.63
VPS45-210ENST00000497638 CYP2U1Q7Z449 544 aa11.1□□□□□ -0.63
VPS45-210ENST00000497638 MARCH10Q8NA82 808 aaPredicted RBP11.1□□□□□ -0.63
VPS45-210ENST00000497638 CDK19Q9BWU1 502 aa11.1□□□□□ -0.63
VPS45-210ENST00000497638 SNRKQ9NRH2 765 aa11.1□□□□□ -0.63
VPS45-210ENST00000497638 GOLGB1Q14789 3259 aaKnown RBP11.09□□□□□ -0.63
VPS45-210ENST00000497638 KCNMA1Q12791 1236 aa11.09□□□□□ -0.63
VPS45-210ENST00000497638 CUEDC1Q9NWM3 386 aaPredicted RBP11.09□□□□□ -0.63
VPS45-210ENST00000497638 SHANK3Q9BYB0 1731 aa11.09□□□□□ -0.63
VPS45-210ENST00000497638 PAPPAQ13219 1627 aa11.09□□□□□ -0.63
VPS45-210ENST00000497638 SLIT3O75094 1523 aa11.09□□□□□ -0.63
VPS45-210ENST00000497638 WDR17Q8IZU2 1322 aa11.09□□□□□ -0.63
VPS45-210ENST00000497638 TPRNQ4KMQ1 711 aa11.08□□□□□ -0.64
VPS45-210ENST00000497638 RIPOR1Q6ZS17 1223 aa11.08□□□□□ -0.64
VPS45-210ENST00000497638 ZBTB7CA1YPR0 619 aa11.07□□□□□ -0.64
VPS45-210ENST00000497638 SLURP2P0DP57 97 aa11.07□□□□□ -0.64
VPS45-210ENST00000497638 SCTRP47872 440 aa11.07□□□□□ -0.64
VPS45-210ENST00000497638 WHAMMQ8TF30 809 aa11.07□□□□□ -0.64
VPS45-210ENST00000497638 COL18A1P39060 1754 aa11.07□□□□□ -0.64
VPS45-210ENST00000497638 NHSQ6T4R5 1651 aa11.07□□□□□ -0.64
VPS45-210ENST00000497638 RNF225M0QZC1 329 aaPredicted RBP11.06□□□□□ -0.64
VPS45-210ENST00000497638 POU4F2Q12837 409 aa11.06□□□□□ -0.64
VPS45-210ENST00000497638 FOXR1Q6PIV2 292 aa11.06□□□□□ -0.64
VPS45-210ENST00000497638 GAS2L1Q99501 681 aaPredicted RBP11.06□□□□□ -0.64
VPS45-210ENST00000497638 TNS2Q63HR2 1409 aa11.06□□□□□ -0.64
VPS45-210ENST00000497638 POLD1P28340 1107 aa11.05□□□□□ -0.64
VPS45-210ENST00000497638 CPSF1Q10570 1443 aaKnown RBP11.05□□□□□ -0.64
VPS45-210ENST00000497638 PPIP5K1Q6PFW1 1433 aa11.05□□□□□ -0.64
VPS45-210ENST00000497638 DCAF11Q8TEB1 546 aa11.05□□□□□ -0.64
VPS45-210ENST00000497638 CARD10Q9BWT7 1032 aa11.05□□□□□ -0.64
VPS45-210ENST00000497638 CCDC7Q96M83 1385 aa11.04□□□□□ -0.64
VPS45-210ENST00000497638 EXOC5O00471 708 aa11.04□□□□□ -0.64
VPS45-210ENST00000497638 GPR37L1O60883 481 aa11.04□□□□□ -0.64
VPS45-210ENST00000497638 CLN3Q13286 438 aa11.04□□□□□ -0.64
VPS45-210ENST00000497638 TRIM22Q8IYM9 498 aa11.04□□□□□ -0.64
VPS45-210ENST00000497638 GMCL1Q96IK5 515 aa11.04□□□□□ -0.64
VPS45-210ENST00000497638 OSBPL3Q9H4L5 887 aa11.04□□□□□ -0.64
VPS45-210ENST00000497638 ARHGEF10LQ9HCE6 1279 aa11.04□□□□□ -0.64
VPS45-210ENST00000497638 ABCC6O95255 1503 aa11.04□□□□□ -0.64
VPS45-210ENST00000497638 COL24A1Q17RW2 1714 aa11.04□□□□□ -0.64
VPS45-210ENST00000497638 QSER1Q2KHR3 1735 aa11.04□□□□□ -0.64
VPS45-210ENST00000497638 USP6P35125 1406 aa11.03□□□□□ -0.64
VPS45-210ENST00000497638 TRPM1Q7Z4N2 1603 aa11.03□□□□□ -0.64
VPS45-210ENST00000497638 GRIN3BO60391 1043 aa11.03□□□□□ -0.64
VPS45-210ENST00000497638 SRSF11Q05519 484 aaKnown RBP11.03□□□□□ -0.64
VPS45-210ENST00000497638 ZNF837Q96EG3 531 aaPredicted RBP11.03□□□□□ -0.64
VPS45-210ENST00000497638 PRM3Q9NNZ6 103 aa11.03□□□□□ -0.64
VPS45-210ENST00000497638 DYRK1BQ9Y463 629 aa11.03□□□□□ -0.64
VPS45-210ENST00000497638 H7C1W4 665 aa11.02□□□□□ -0.65
VPS45-210ENST00000497638 MYCP01106 439 aaPredicted RBP11.02□□□□□ -0.65
VPS45-210ENST00000497638 CSB-PGBD3P0DP91 1061 aa11.02□□□□□ -0.65
VPS45-210ENST00000497638 MARSP56192 900 aaKnown RBP11.02□□□□□ -0.65
VPS45-210ENST00000497638 ZNF827Q17R98 1081 aa11.02□□□□□ -0.65
VPS45-210ENST00000497638 TMEM151AQ8N4L1 468 aa11.02□□□□□ -0.65
VPS45-210ENST00000497638 GRIP2Q9C0E4 1043 aa11.02□□□□□ -0.65
VPS45-210ENST00000497638 RAB6BQ9NRW1 208 aa11.02□□□□□ -0.65
VPS45-210ENST00000497638 CEP126Q9P2H0 1117 aa11.02□□□□□ -0.65
VPS45-210ENST00000497638 PIK3C2AO00443 1686 aa11.01□□□□□ -0.65
VPS45-210ENST00000497638 QRICH2Q9H0J4 1663 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms