RNA–Protein interactions for RNA: ENST00000497382.5

VIT-208, Transcript of vitrin, human

TSL 1 (best) BASIC

Gene VIT, Length 2,650 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VIT-208	ENST00000497382	N6AMT1	Q9Y5N5	214 aa		11.24	□□□□□ -0.61
VIT-208	ENST00000497382	PPP1R15A	O75807	674 aa	Predicted RBP	11.24	□□□□□ -0.61
VIT-208	ENST00000497382	FCHSD2	O94868	740 aa		11.24	□□□□□ -0.61
VIT-208	ENST00000497382	SESN3	P58005	492 aa		11.24	□□□□□ -0.61
VIT-208	ENST00000497382	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
VIT-208	ENST00000497382	PDIA5	Q14554	519 aa		11.24	□□□□□ -0.61
VIT-208	ENST00000497382	MYSM1	Q5VVJ2	828 aa		11.24	□□□□□ -0.61
VIT-208	ENST00000497382	BHMT	Q93088	406 aa		11.24	□□□□□ -0.61
VIT-208	ENST00000497382	RMDN2	Q96LZ7	410 aa		11.24	□□□□□ -0.61
VIT-208	ENST00000497382	IFT122	Q9HBG6	1241 aa		11.24	□□□□□ -0.61
VIT-208	ENST00000497382	XRN1	Q8IZH2	1706 aa	Known RBP	11.24	□□□□□ -0.61
VIT-208	ENST00000497382	MST1R	Q04912	1400 aa		11.24	□□□□□ -0.61
VIT-208	ENST00000497382	BICD1	Q96G01	975 aa		11.23	□□□□□ -0.61
VIT-208	ENST00000497382	PLEKHG4B	Q96PX9	1271 aa		11.23	□□□□□ -0.61
VIT-208	ENST00000497382	UNC45A	Q9H3U1	944 aa		11.23	□□□□□ -0.61
VIT-208	ENST00000497382	DDX41	Q9UJV9	622 aa	Known RBP	11.23	□□□□□ -0.61
VIT-208	ENST00000497382	RBBP5	Q15291	538 aa	Known RBP	11.23	□□□□□ -0.61
VIT-208	ENST00000497382	TRPC5	Q9UL62	973 aa	Predicted RBP	11.23	□□□□□ -0.61
VIT-208	ENST00000497382	hCG_2014768	A0A024R1R8	64 aa		11.22	□□□□□ -0.61
VIT-208	ENST00000497382	DYTN	A2CJ06	578 aa		11.22	□□□□□ -0.61
VIT-208	ENST00000497382	C21orf2	O43822	256 aa		11.22	□□□□□ -0.61
VIT-208	ENST00000497382	ZNF132	P52740	706 aa		11.22	□□□□□ -0.61
VIT-208	ENST00000497382	RABEP1	Q15276	862 aa		11.22	□□□□□ -0.61
VIT-208	ENST00000497382	E2F4	Q16254	413 aa		11.22	□□□□□ -0.61
VIT-208	ENST00000497382	CCDC30	Q5VVM6	783 aa		11.22	□□□□□ -0.61
VIT-208	ENST00000497382	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.22	□□□□□ -0.61
VIT-208	ENST00000497382	PMFBP1	Q8TBY8	1022 aa		11.22	□□□□□ -0.61
VIT-208	ENST00000497382	MIEF2	Q96C03	454 aa		11.22	□□□□□ -0.61
VIT-208	ENST00000497382	ZKSCAN5	Q9Y2L8	839 aa		11.22	□□□□□ -0.61
VIT-208	ENST00000497382	ATRN	O75882	1429 aa		11.22	□□□□□ -0.61
VIT-208	ENST00000497382	ABCC5	O15440	1437 aa		11.22	□□□□□ -0.61
VIT-208	ENST00000497382	HOXA2	O43364	376 aa		11.22	□□□□□ -0.61
VIT-208	ENST00000497382	HIP1R	O75146	1068 aa		11.22	□□□□□ -0.61
VIT-208	ENST00000497382	NEBL	O76041	1014 aa		11.22	□□□□□ -0.61
VIT-208	ENST00000497382	TPM1	P09493	284 aa		11.22	□□□□□ -0.61
VIT-208	ENST00000497382	SKIV2L	Q15477	1246 aa	Known RBP	11.22	□□□□□ -0.61
VIT-208	ENST00000497382	TTLL5	Q6EMB2	1281 aa		11.22	□□□□□ -0.61
VIT-208	ENST00000497382	UBE2Q1	Q7Z7E8	422 aa		11.22	□□□□□ -0.61
VIT-208	ENST00000497382	SYAP1	Q96A49	352 aa	Predicted RBP	11.22	□□□□□ -0.61
VIT-208	ENST00000497382	BCL2L12	Q9HB09	334 aa		11.22	□□□□□ -0.61
VIT-208	ENST00000497382	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.22	□□□□□ -0.61
VIT-208	ENST00000497382		A6NJR5	290 aa		11.22	□□□□□ -0.61
VIT-208	ENST00000497382	PRPF4B	Q13523	1007 aa	Known RBP	11.22	□□□□□ -0.61
VIT-208	ENST00000497382	KRT222	Q8N1A0	295 aa		11.22	□□□□□ -0.61
VIT-208	ENST00000497382	C8orf37	Q96NL8	207 aa		11.22	□□□□□ -0.61
VIT-208	ENST00000497382	FOSL1	P15407	271 aa		11.21	□□□□□ -0.61
VIT-208	ENST00000497382	RASSF7	Q02833	373 aa		11.21	□□□□□ -0.61
VIT-208	ENST00000497382	ICA1	Q05084	483 aa		11.21	□□□□□ -0.61
VIT-208	ENST00000497382	SAPCD2	Q86UD0	394 aa		11.21	□□□□□ -0.61
VIT-208	ENST00000497382	TRIM42	Q8IWZ5	723 aa		11.21	□□□□□ -0.61
VIT-208	ENST00000497382	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.21	□□□□□ -0.61
VIT-208	ENST00000497382	PICK1	Q9NRD5	415 aa		11.21	□□□□□ -0.61
VIT-208	ENST00000497382	ATG3	Q9NT62	314 aa		11.21	□□□□□ -0.61
VIT-208	ENST00000497382	SPHKAP	Q2M3C7	1700 aa		11.21	□□□□□ -0.61
VIT-208	ENST00000497382	ANKRD30A	Q9BXX3	1397 aa		11.21	□□□□□ -0.62
VIT-208	ENST00000497382	SMC2	O95347	1197 aa		11.21	□□□□□ -0.62
VIT-208	ENST00000497382	SYNE3	Q6ZMZ3	975 aa		11.21	□□□□□ -0.62
VIT-208	ENST00000497382	MYOCD	Q8IZQ8	938 aa		11.21	□□□□□ -0.62
VIT-208	ENST00000497382	TRIM11	Q96F44	468 aa		11.21	□□□□□ -0.62
VIT-208	ENST00000497382	GBP4	Q96PP9	640 aa		11.21	□□□□□ -0.62
VIT-208	ENST00000497382	TRIM7	Q9C029	511 aa		11.21	□□□□□ -0.62
VIT-208	ENST00000497382	GINM1	Q9NU53	330 aa		11.21	□□□□□ -0.62
VIT-208	ENST00000497382	SPATS2L	Q9NUQ6	558 aa	Known RBP	11.21	□□□□□ -0.62
VIT-208	ENST00000497382	IP6K2	Q9UHH9	426 aa		11.21	□□□□□ -0.62
VIT-208	ENST00000497382	UNC13B	O14795	1591 aa		11.21	□□□□□ -0.62
VIT-208	ENST00000497382	COL19A1	Q14993	1142 aa		11.2	□□□□□ -0.62
VIT-208	ENST00000497382	SLF2	Q8IX21	1173 aa		11.2	□□□□□ -0.62
VIT-208	ENST00000497382		F8VZ95	297 aa		11.2	□□□□□ -0.62
VIT-208	ENST00000497382	IL4R	P24394	825 aa		11.2	□□□□□ -0.62
VIT-208	ENST00000497382	IGBP1	P78318	339 aa		11.2	□□□□□ -0.62
VIT-208	ENST00000497382	LEKR1	Q6ZMV7	388 aa		11.2	□□□□□ -0.62
VIT-208	ENST00000497382	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
VIT-208	ENST00000497382	TRMT1	Q9NXH9	659 aa	Known RBP	11.2	□□□□□ -0.62
VIT-208	ENST00000497382	IVNS1ABP	Q9Y6Y0	642 aa		11.2	□□□□□ -0.62
VIT-208	ENST00000497382	DAPK1	P53355	1430 aa		11.19	□□□□□ -0.62
VIT-208	ENST00000497382	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.19	□□□□□ -0.62
VIT-208	ENST00000497382	LDHC	P07864	332 aa		11.19	□□□□□ -0.62
VIT-208	ENST00000497382	ZNF24	P17028	368 aa		11.19	□□□□□ -0.62
VIT-208	ENST00000497382	TBC1D8B	Q0IIM8	1120 aa		11.19	□□□□□ -0.62
VIT-208	ENST00000497382	WAPL	Q7Z5K2	1190 aa		11.19	□□□□□ -0.62
VIT-208	ENST00000497382	NUTM1	Q86Y26	1132 aa		11.19	□□□□□ -0.62
VIT-208	ENST00000497382	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.19	□□□□□ -0.62
VIT-208	ENST00000497382	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.19	□□□□□ -0.62
VIT-208	ENST00000497382	SCIN	Q9Y6U3	715 aa		11.19	□□□□□ -0.62
VIT-208	ENST00000497382	TRIM66	O15016	1216 aa		11.19	□□□□□ -0.62
VIT-208	ENST00000497382	MTA2	O94776	668 aa		11.19	□□□□□ -0.62
VIT-208	ENST00000497382	SMARCA1	P28370	1054 aa		11.19	□□□□□ -0.62
VIT-208	ENST00000497382	MCM4	P33991	863 aa		11.19	□□□□□ -0.62
VIT-208	ENST00000497382	RDX	P35241	583 aa	Known RBP	11.19	□□□□□ -0.62
VIT-208	ENST00000497382	TBX4	P57082	545 aa		11.19	□□□□□ -0.62
VIT-208	ENST00000497382	TMED1	Q13445	227 aa		11.19	□□□□□ -0.62
VIT-208	ENST00000497382	AKNAD1	Q5T1N1	836 aa		11.19	□□□□□ -0.62
VIT-208	ENST00000497382	ACBD5	Q5T8D3	534 aa	Predicted RBP	11.19	□□□□□ -0.62
VIT-208	ENST00000497382	CEP63	Q96MT8	703 aa		11.19	□□□□□ -0.62
VIT-208	ENST00000497382	CD248	Q9HCU0	757 aa		11.19	□□□□□ -0.62
VIT-208	ENST00000497382	ZNF446	Q9NWS9	450 aa		11.19	□□□□□ -0.62
VIT-208	ENST00000497382	SFMBT1	Q9UHJ3	866 aa		11.19	□□□□□ -0.62
VIT-208	ENST00000497382	BLM	P54132	1417 aa	Predicted RBP	11.19	□□□□□ -0.62
VIT-208	ENST00000497382	HFM1	A2PYH4	1435 aa		11.18	□□□□□ -0.62
VIT-208	ENST00000497382	KRT38	O76015	456 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms