RNA–Protein interactions for RNA: ENST00000497049.5

SIK3-213, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-213ENST00000497049 ZNF853P0CG23 659 aa8.21□□□□□ -1.1
SIK3-213ENST00000497049 RXRBP28702 533 aa8.21□□□□□ -1.1
SIK3-213ENST00000497049 SKOR1P84550 965 aa8.21□□□□□ -1.1
SIK3-213ENST00000497049 SLFN5Q08AF3 891 aa8.21□□□□□ -1.1
SIK3-213ENST00000497049 TAF7Q15545 349 aaPredicted RBP8.21□□□□□ -1.1
SIK3-213ENST00000497049 DDB1Q16531 1140 aa8.21□□□□□ -1.1
SIK3-213ENST00000497049 LINC01559Q495D7 138 aa8.21□□□□□ -1.1
SIK3-213ENST00000497049 SNIP1Q8TAD8 396 aaKnown RBP8.21□□□□□ -1.1
SIK3-213ENST00000497049 DDX54Q8TDD1 881 aaKnown RBP8.21□□□□□ -1.1
SIK3-213ENST00000497049 LGR6Q9HBX8 967 aa8.21□□□□□ -1.1
SIK3-213ENST00000497049 HMX1Q9NP08 348 aaPredicted RBP8.21□□□□□ -1.1
SIK3-213ENST00000497049 OVOS2A0A0G2JMS6 1433 aa8.2□□□□□ -1.1
SIK3-213ENST00000497049 DISP2A7MBM2 1401 aa8.2□□□□□ -1.1
SIK3-213ENST00000497049 E9PSI1 815 aa8.2□□□□□ -1.1
SIK3-213ENST00000497049 CHL1O00533 1208 aa8.2□□□□□ -1.1
SIK3-213ENST00000497049 TRIM67Q6ZTA4 783 aa8.2□□□□□ -1.1
SIK3-213ENST00000497049 SH3BP5LQ7L8J4 393 aa8.2□□□□□ -1.1
SIK3-213ENST00000497049 MTMR14Q8NCE2 650 aa8.2□□□□□ -1.1
SIK3-213ENST00000497049 MRGPRX2Q96LB1 330 aa8.2□□□□□ -1.1
SIK3-213ENST00000497049 CDV3Q9UKY7 258 aaKnown RBP8.2□□□□□ -1.1
SIK3-213ENST00000497049 PCDH11XQ9BZA7 1347 aa8.2□□□□□ -1.1
SIK3-213ENST00000497049 PCDH11YQ9BZA8 1340 aa8.2□□□□□ -1.1
SIK3-213ENST00000497049 TTC24A2A3L6 582 aaPredicted RBP8.19□□□□□ -1.1
SIK3-213ENST00000497049 GNAI1P63096 354 aa8.19□□□□□ -1.1
SIK3-213ENST00000497049 DCTN1Q14203 1278 aa8.19□□□□□ -1.1
SIK3-213ENST00000497049 MPRIPQ6WCQ1 1025 aa8.19□□□□□ -1.1
SIK3-213ENST00000497049 MCM10Q7L590 875 aa8.19□□□□□ -1.1
SIK3-213ENST00000497049 SEPT12Q8IYM1 358 aa8.19□□□□□ -1.1
SIK3-213ENST00000497049 MARCH10Q8NA82 808 aaPredicted RBP8.19□□□□□ -1.1
SIK3-213ENST00000497049 ARHGAP9Q9BRR9 750 aa8.19□□□□□ -1.1
SIK3-213ENST00000497049 TRIM34Q9BYJ4 488 aa8.19□□□□□ -1.1
SIK3-213ENST00000497049 IFT57Q9NWB7 429 aa8.19□□□□□ -1.1
SIK3-213ENST00000497049 ZNF330Q9Y3S2 320 aaPredicted RBP8.19□□□□□ -1.1
SIK3-213ENST00000497049 CEMIPQ8WUJ3 1361 aa8.19□□□□□ -1.1
SIK3-213ENST00000497049 MAP3K5Q99683 1374 aa8.19□□□□□ -1.1
SIK3-213ENST00000497049 MEGF6O75095 1541 aa8.19□□□□□ -1.1
SIK3-213ENST00000497049 FAM208AQ9UK61 1670 aaKnown RBP8.18□□□□□ -1.1
SIK3-213ENST00000497049 SENP3-EIF4A1A0A087X0R7 540 aa8.18□□□□□ -1.1
SIK3-213ENST00000497049 TNFRSF10AO00220 468 aa8.18□□□□□ -1.1
SIK3-213ENST00000497049 MCM6Q14566 821 aa8.18□□□□□ -1.1
SIK3-213ENST00000497049 POTEAQ6S8J7 498 aa8.18□□□□□ -1.1
SIK3-213ENST00000497049 SH3RF1Q7Z6J0 888 aa8.18□□□□□ -1.1
SIK3-213ENST00000497049 NFATC2IPQ8NCF5 419 aa8.18□□□□□ -1.1
SIK3-213ENST00000497049 MYH16Q9H6N6 1097 aa8.18□□□□□ -1.1
SIK3-213ENST00000497049 DGAT1O75907 488 aa8.17□□□□□ -1.1
SIK3-213ENST00000497049 MCCD1P59942 119 aaPredicted RBP8.17□□□□□ -1.1
SIK3-213ENST00000497049 TEFQ10587 303 aa8.17□□□□□ -1.1
SIK3-213ENST00000497049 DUSP27Q5VZP5 1158 aa8.17□□□□□ -1.1
SIK3-213ENST00000497049 ZBTB33Q86T24 672 aa8.17□□□□□ -1.1
SIK3-213ENST00000497049 TRMT44Q8IYL2 757 aaKnown RBP8.17□□□□□ -1.1
SIK3-213ENST00000497049 THUMPD2Q9BTF0 503 aaKnown RBP8.17□□□□□ -1.1
SIK3-213ENST00000497049 SLC52A2Q9HAB3 445 aa8.17□□□□□ -1.1
SIK3-213ENST00000497049 TOR4AQ9NXH8 423 aa8.17□□□□□ -1.1
SIK3-213ENST00000497049 RGPD2P0DJD1 1756 aa8.17□□□□□ -1.1
SIK3-213ENST00000497049 CABP4P57796 275 aa8.16□□□□□ -1.1
SIK3-213ENST00000497049 PLCH1Q4KWH8 1693 aa8.16□□□□□ -1.1
SIK3-213ENST00000497049 PKDCCQ504Y2 493 aa8.16□□□□□ -1.1
SIK3-213ENST00000497049 NRAPQ86VF7 1730 aa8.16□□□□□ -1.1
SIK3-213ENST00000497049 C1QTNF2Q9BXJ5 285 aa8.16□□□□□ -1.1
SIK3-213ENST00000497049 SNRKQ9NRH2 765 aa8.16□□□□□ -1.1
SIK3-213ENST00000497049 MAP4K5Q9Y4K4 846 aa8.16□□□□□ -1.1
SIK3-213ENST00000497049 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.15□□□□□ -1.1
SIK3-213ENST00000497049 BCL9O00512 1426 aa8.15□□□□□ -1.1
SIK3-213ENST00000497049 BTBD11A6QL63 1104 aa8.15□□□□□ -1.1
SIK3-213ENST00000497049 SIAH2O43255 324 aa8.15□□□□□ -1.1
SIK3-213ENST00000497049 CT47B1P0C2W7 299 aaPredicted RBP8.15□□□□□ -1.1
SIK3-213ENST00000497049 FAM196AQ6ZSG2 479 aa8.15□□□□□ -1.1
SIK3-213ENST00000497049 KRT27Q7Z3Y8 459 aa8.15□□□□□ -1.1
SIK3-213ENST00000497049 FOXJ1Q92949 421 aa8.15□□□□□ -1.1
SIK3-213ENST00000497049 SLC10A4Q96EP9 437 aa8.15□□□□□ -1.1
SIK3-213ENST00000497049 CHMP4AQ9BY43 222 aa8.15□□□□□ -1.1
SIK3-213ENST00000497049 MBIPQ9NS73 344 aa8.15□□□□□ -1.1
SIK3-213ENST00000497049 LAS1LQ9Y4W2 734 aaKnown RBP8.15□□□□□ -1.1
SIK3-213ENST00000497049 SOS1Q07889 1333 aaPredicted RBP8.14□□□□□ -1.11
SIK3-213ENST00000497049 MAGEB6P1A0A0J9YX57 407 aa8.14□□□□□ -1.11
SIK3-213ENST00000497049 ZBBXA8MT70 800 aa8.14□□□□□ -1.11
SIK3-213ENST00000497049 RAD21O60216 631 aa8.14□□□□□ -1.11
SIK3-213ENST00000497049 ZNF790Q6PG37 636 aa8.14□□□□□ -1.11
SIK3-213ENST00000497049 EPS8L1Q8TE68 723 aa8.14□□□□□ -1.11
SIK3-213ENST00000497049 PIGBQ92521 554 aa8.14□□□□□ -1.11
SIK3-213ENST00000497049 ZNF428Q96B54 188 aa8.14□□□□□ -1.11
SIK3-213ENST00000497049 CDK15Q96Q40 435 aa8.14□□□□□ -1.11
SIK3-213ENST00000497049 MIS18AQ9NYP9 233 aa8.14□□□□□ -1.11
SIK3-213ENST00000497049 TSPYL4Q9UJ04 414 aa8.14□□□□□ -1.11
SIK3-213ENST00000497049 WASF2Q9Y6W5 498 aa8.14□□□□□ -1.11
SIK3-213ENST00000497049 VAMP4O75379 141 aa8.13□□□□□ -1.11
SIK3-213ENST00000497049 ALDH1A1P00352 501 aa8.13□□□□□ -1.11
SIK3-213ENST00000497049 EIF4A1P60842 406 aaKnown RBP8.13□□□□□ -1.11
SIK3-213ENST00000497049 NBPF20Q3BBV1 942 aa8.13□□□□□ -1.11
SIK3-213ENST00000497049 CCDC125Q86Z20 511 aa8.13□□□□□ -1.11
SIK3-213ENST00000497049 TMOD3Q9NYL9 352 aa8.13□□□□□ -1.11
SIK3-213ENST00000497049 GLI3P10071 1580 aa8.13□□□□□ -1.11
SIK3-213ENST00000497049 KDM6AO15550 1401 aaPredicted RBP8.12□□□□□ -1.11
SIK3-213ENST00000497049 TNS2Q63HR2 1409 aa8.12□□□□□ -1.11
SIK3-213ENST00000497049 FAM187AA6NFU0 413 aa8.12□□□□□ -1.11
SIK3-213ENST00000497049 ADH1CP00326 375 aa8.12□□□□□ -1.11
SIK3-213ENST00000497049 HOXB7P09629 217 aa8.12□□□□□ -1.11
SIK3-213ENST00000497049 EXOSC9Q06265 439 aaKnown RBP8.12□□□□□ -1.11
SIK3-213ENST00000497049 NR1H3Q13133 447 aa8.12□□□□□ -1.11
SIK3-213ENST00000497049 NR5A1Q13285 461 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms