RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 GLB1P16278 677 aa6.93□□□□□ -1.3
VPS26A-208ENST00000497022 LCE1DQ5T752 114 aa6.93□□□□□ -1.3
VPS26A-208ENST00000497022 MUC3BQ9H195 1237 aa6.93□□□□□ -1.3
VPS26A-208ENST00000497022 KLK14Q9P0G3 267 aa6.93□□□□□ -1.3
VPS26A-208ENST00000497022 STOML1Q9UBI4 398 aa6.93□□□□□ -1.3
VPS26A-208ENST00000497022 TGFB1P01137 390 aa6.92□□□□□ -1.3
VPS26A-208ENST00000497022 SPINK2P20155 84 aa6.92□□□□□ -1.3
VPS26A-208ENST00000497022 GRIK1P39086 918 aa6.92□□□□□ -1.3
VPS26A-208ENST00000497022 SETDB1Q15047 1291 aa6.92□□□□□ -1.3
VPS26A-208ENST00000497022 UVSSAQ2YD98 709 aa6.92□□□□□ -1.3
VPS26A-208ENST00000497022 HFE2Q6ZVN8 426 aa6.92□□□□□ -1.3
VPS26A-208ENST00000497022 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.92□□□□□ -1.3
VPS26A-208ENST00000497022 RBSNQ9H1K0 784 aa6.92□□□□□ -1.3
VPS26A-208ENST00000497022 LOC102724428A0A0B4J2F2 783 aa6.91□□□□□ -1.3
VPS26A-208ENST00000497022 DHX15O43143 795 aaKnown RBP6.91□□□□□ -1.3
VPS26A-208ENST00000497022 MICAL2O94851 1124 aa6.91□□□□□ -1.3
VPS26A-208ENST00000497022 GHRHP01286 108 aa6.91□□□□□ -1.3
VPS26A-208ENST00000497022 PSAPP07602 524 aa6.91□□□□□ -1.3
VPS26A-208ENST00000497022 SOX18P35713 384 aa6.91□□□□□ -1.3
VPS26A-208ENST00000497022 SIK1P57059 783 aa6.91□□□□□ -1.3
VPS26A-208ENST00000497022 SRPK2P78362 688 aaKnown RBP6.91□□□□□ -1.3
VPS26A-208ENST00000497022 DGKZQ13574 1117 aa6.91□□□□□ -1.3
VPS26A-208ENST00000497022 ZDHHC13Q8IUH4 622 aa6.91□□□□□ -1.3
VPS26A-208ENST00000497022 IL22RA1Q8N6P7 574 aa6.91□□□□□ -1.3
VPS26A-208ENST00000497022 FAM200AQ8TCP9 573 aa6.91□□□□□ -1.3
VPS26A-208ENST00000497022 KRTAP4-7Q9BYR0 210 aa6.91□□□□□ -1.3
VPS26A-208ENST00000497022 CEP41Q9BYV8 373 aa6.91□□□□□ -1.3
VPS26A-208ENST00000497022 GDF6Q6KF10 455 aaPredicted RBP6.9□□□□□ -1.3
VPS26A-208ENST00000497022 MYO19Q96H55 970 aa6.9□□□□□ -1.3
VPS26A-208ENST00000497022 NFIAQ12857 509 aa6.89□□□□□ -1.31
VPS26A-208ENST00000497022 FZD5Q13467 585 aa6.89□□□□□ -1.31
VPS26A-208ENST00000497022 C11orf91Q3C1V1 193 aa6.89□□□□□ -1.31
VPS26A-208ENST00000497022 AGGF1Q8N302 714 aaeCLIP6.89□□□□□ -1.31
VPS26A-208ENST00000497022 UBL7Q96S82 380 aaPredicted RBP6.89□□□□□ -1.31
VPS26A-208ENST00000497022 QTRT2Q9H974 415 aaKnown RBP6.89□□□□□ -1.31
VPS26A-208ENST00000497022 NOVA2Q9UNW9 492 aaKnown RBP6.89□□□□□ -1.31
VPS26A-208ENST00000497022 RTCBQ9Y3I0 505 aaKnown RBP6.89□□□□□ -1.31
VPS26A-208ENST00000497022 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.88□□□□□ -1.31
VPS26A-208ENST00000497022 ARID3CA6NKF2 412 aa6.88□□□□□ -1.31
VPS26A-208ENST00000497022 FOXO3O43524 673 aa6.88□□□□□ -1.31
VPS26A-208ENST00000497022 XYLBO75191 536 aa6.88□□□□□ -1.31
VPS26A-208ENST00000497022 WEE1P30291 646 aa6.88□□□□□ -1.31
VPS26A-208ENST00000497022 ELOAQ14241 798 aaKnown RBP6.88□□□□□ -1.31
VPS26A-208ENST00000497022 DTX1Q86Y01 620 aa6.88□□□□□ -1.31
VPS26A-208ENST00000497022 CCDC97Q96F63 343 aaPredicted RBP6.88□□□□□ -1.31
VPS26A-208ENST00000497022 J3QW42 95 aa6.87□□□□□ -1.31
VPS26A-208ENST00000497022 OPLAHO14841 1288 aa6.87□□□□□ -1.31
VPS26A-208ENST00000497022 ARMC10Q8N2F6 343 aa6.87□□□□□ -1.31
VPS26A-208ENST00000497022 DBNDD2Q9BQY9 259 aa6.87□□□□□ -1.31
VPS26A-208ENST00000497022 SERPINA10Q9UK55 444 aa6.87□□□□□ -1.31
VPS26A-208ENST00000497022 ZMIZ1Q9ULJ6 1067 aa6.87□□□□□ -1.31
VPS26A-208ENST00000497022 PPME1Q9Y570 386 aa6.87□□□□□ -1.31
VPS26A-208ENST00000497022 MMP20O60882 483 aa6.86□□□□□ -1.31
VPS26A-208ENST00000497022 RNF43Q68DV7 783 aa6.86□□□□□ -1.31
VPS26A-208ENST00000497022 UTP4Q969X6 686 aaKnown RBP6.86□□□□□ -1.31
VPS26A-208ENST00000497022 NSUN5Q96P11 429 aaKnown RBP6.86□□□□□ -1.31
VPS26A-208ENST00000497022 ACIN1Q9UKV3 1341 aaKnown RBP6.85□□□□□ -1.31
VPS26A-208ENST00000497022 ADAMTS4O75173 837 aa6.85□□□□□ -1.31
VPS26A-208ENST00000497022 ATG7O95352 703 aa6.85□□□□□ -1.31
VPS26A-208ENST00000497022 WNT11O96014 354 aa6.85□□□□□ -1.31
VPS26A-208ENST00000497022 VTI1AQ96AJ9 217 aa6.85□□□□□ -1.31
VPS26A-208ENST00000497022 FAM46AQ96IP4 442 aaKnown RBP6.85□□□□□ -1.31
VPS26A-208ENST00000497022 C7orf69Q9H7B7 122 aa6.85□□□□□ -1.31
VPS26A-208ENST00000497022 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.85□□□□□ -1.317e-11■■■■■ 31.1
VPS26A-208ENST00000497022 TRIM33Q9UPN9 1127 aa6.85□□□□□ -1.31
VPS26A-208ENST00000497022 PRR19A6NJB7 356 aa6.84□□□□□ -1.31
VPS26A-208ENST00000497022 CD68P34810 354 aaPredicted RBP6.84□□□□□ -1.31
VPS26A-208ENST00000497022 FAM69CQ0P6D2 419 aa6.84□□□□□ -1.31
VPS26A-208ENST00000497022 SWI5Q1ZZU3 235 aa6.84□□□□□ -1.31
VPS26A-208ENST00000497022 ACAD11Q709F0 780 aa6.84□□□□□ -1.31
VPS26A-208ENST00000497022 GALNT11Q8NCW6 608 aa6.84□□□□□ -1.31
VPS26A-208ENST00000497022 KCNMB2Q9Y691 235 aa6.84□□□□□ -1.31
VPS26A-208ENST00000497022 TRIM42Q8IWZ5 723 aa6.83□□□□□ -1.32
VPS26A-208ENST00000497022 RGL4Q8IZJ4 473 aa6.83□□□□□ -1.32
VPS26A-208ENST00000497022 CMTR1Q8N1G2 835 aaKnown RBP6.83□□□□□ -1.32
VPS26A-208ENST00000497022 STK32AQ8WU08 396 aa6.83□□□□□ -1.32
VPS26A-208ENST00000497022 PBXIP1Q96AQ6 731 aa6.83□□□□□ -1.32
VPS26A-208ENST00000497022 MYRFLQ96LU7 910 aa6.83□□□□□ -1.32
VPS26A-208ENST00000497022 PRIMPOLQ96LW4 560 aa6.83□□□□□ -1.32
VPS26A-208ENST00000497022 USP20Q9Y2K6 914 aa6.83□□□□□ -1.32
VPS26A-208ENST00000497022 PRMT3O60678 531 aa6.82□□□□□ -1.32
VPS26A-208ENST00000497022 WISP1O95388 367 aa6.82□□□□□ -1.32
VPS26A-208ENST00000497022 C14orf37Q86TY3 774 aa6.82□□□□□ -1.32
VPS26A-208ENST00000497022 TREML1Q86YW5 311 aa6.82□□□□□ -1.32
VPS26A-208ENST00000497022 ADGRE2Q9UHX3 823 aa6.82□□□□□ -1.32
VPS26A-208ENST00000497022 HMX2A2RU54 273 aa6.81□□□□□ -1.32
VPS26A-208ENST00000497022 FKBP5Q13451 457 aaPredicted RBP6.81□□□□□ -1.32
VPS26A-208ENST00000497022 OCLNQ16625 522 aa6.81□□□□□ -1.32
VPS26A-208ENST00000497022 TMEM164Q5U3C3 297 aa6.81□□□□□ -1.32
VPS26A-208ENST00000497022 NLRP13Q86W25 1043 aa6.81□□□□□ -1.32
VPS26A-208ENST00000497022 CLEC10AQ8IUN9 316 aa6.81□□□□□ -1.32
VPS26A-208ENST00000497022 KLHL23Q8NBE8 558 aa6.81□□□□□ -1.32
VPS26A-208ENST00000497022 LINC01387J3KSC0 135 aa6.8□□□□□ -1.32
VPS26A-208ENST00000497022 TM4SF5O14894 197 aa6.8□□□□□ -1.32
VPS26A-208ENST00000497022 FAM20CQ8IXL6 584 aa6.8□□□□□ -1.32
VPS26A-208ENST00000497022 CCDC82Q8N4S0 544 aa6.8□□□□□ -1.32
VPS26A-208ENST00000497022 FAM83CQ9BQN1 747 aa6.8□□□□□ -1.32
VPS26A-208ENST00000497022 C1orf115Q9H7X2 142 aa6.8□□□□□ -1.32
VPS26A-208ENST00000497022 LRFN2Q9ULH4 789 aa6.8□□□□□ -1.32
VPS26A-208ENST00000497022 SMNDC1O75940 238 aaKnown RBP eCLIP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms