RNA–Protein interactions for RNA: ENST00000496756.2

PHGDH-207, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-207ENST00000496756 SPINK5Q9NQ38 1064 aaPredicted RBP16.85■□□□□ 0.29
PHGDH-207ENST00000496756 IFT57Q9NWB7 429 aa16.85■□□□□ 0.29
PHGDH-207ENST00000496756 RNF186Q9NXI6 227 aa16.85■□□□□ 0.29
PHGDH-207ENST00000496756 AKAP11Q9UKA4 1901 aa16.85■□□□□ 0.29
PHGDH-207ENST00000496756 WASHC4Q2M389 1173 aa16.84■□□□□ 0.29
PHGDH-207ENST00000496756 CTU1Q7Z7A3 348 aaKnown RBP16.84■□□□□ 0.29
PHGDH-207ENST00000496756 ZBTB12Q9Y330 459 aaPredicted RBP16.84■□□□□ 0.29
PHGDH-207ENST00000496756 DLG5Q8TDM6 1919 aa16.84■□□□□ 0.29
PHGDH-207ENST00000496756 PSMD14O00487 310 aa16.83■□□□□ 0.28
PHGDH-207ENST00000496756 HCLS1P14317 486 aaPredicted RBP16.83■□□□□ 0.28
PHGDH-207ENST00000496756 LAMB2P55268 1798 aa16.83■□□□□ 0.28
PHGDH-207ENST00000496756 TBC1D10BQ4KMP7 808 aaPredicted RBP16.83■□□□□ 0.28
PHGDH-207ENST00000496756 SH3TC1Q8TE82 1336 aa16.82■□□□□ 0.28
PHGDH-207ENST00000496756 FANCIQ9NVI1 1328 aa16.82■□□□□ 0.28
PHGDH-207ENST00000496756 SLC10A3P09131 477 aa16.82■□□□□ 0.28
PHGDH-207ENST00000496756 DLK2Q6UY11 383 aa16.82■□□□□ 0.28
PHGDH-207ENST00000496756 LRP10Q7Z4F1 713 aa16.82■□□□□ 0.28
PHGDH-207ENST00000496756 NLRP10Q86W26 655 aa16.82■□□□□ 0.28
PHGDH-207ENST00000496756 THUMPD2Q9BTF0 503 aaKnown RBP16.82■□□□□ 0.28
PHGDH-207ENST00000496756 TRMT112Q9UI30 125 aaKnown RBP16.82■□□□□ 0.28
PHGDH-207ENST00000496756 POLR2AP24928 1970 aaKnown RBP16.82■□□□□ 0.28
PHGDH-207ENST00000496756 MS4A1P11836 297 aa16.81■□□□□ 0.28
PHGDH-207ENST00000496756 EIF2S2P20042 333 aaKnown RBP16.81■□□□□ 0.28
PHGDH-207ENST00000496756 IRX6P78412 446 aaPredicted RBP16.81■□□□□ 0.28
PHGDH-207ENST00000496756 PDIA6Q15084 440 aa16.81■□□□□ 0.28
PHGDH-207ENST00000496756 SULF1Q8IWU6 871 aa16.81■□□□□ 0.28
PHGDH-207ENST00000496756 CSRNP1Q96S65 589 aa16.81■□□□□ 0.28
PHGDH-207ENST00000496756 DUOX1Q9NRD9 1551 aa16.81■□□□□ 0.28
PHGDH-207ENST00000496756 ADM5C9JUS6 153 aa16.8■□□□□ 0.28
PHGDH-207ENST00000496756 PKN2Q16513 984 aaKnown RBP16.8■□□□□ 0.28
PHGDH-207ENST00000496756 RBM26Q5T8P6 1007 aaKnown RBP16.8■□□□□ 0.28
PHGDH-207ENST00000496756 DBNDD1Q9H9R9 158 aa16.8■□□□□ 0.28
PHGDH-207ENST00000496756 TSPYL4Q9UJ04 414 aa16.8■□□□□ 0.28
PHGDH-207ENST00000496756 NSFL1CQ9UNZ2 370 aaKnown RBP16.8■□□□□ 0.28
PHGDH-207ENST00000496756 LRRC37AA6NMS7 1700 aa16.79■□□□□ 0.28
PHGDH-207ENST00000496756 EGFRP00533 1210 aa16.79■□□□□ 0.28
PHGDH-207ENST00000496756 TCIRG1Q13488 830 aa16.79■□□□□ 0.28
PHGDH-207ENST00000496756 PDE3AQ14432 1141 aa16.79■□□□□ 0.28
PHGDH-207ENST00000496756 EYA3Q99504 573 aa16.79■□□□□ 0.28
PHGDH-207ENST00000496756 C6orf229H3BNL8 230 aa16.78■□□□□ 0.28
PHGDH-207ENST00000496756 ECE2O60344 883 aa16.78■□□□□ 0.28
PHGDH-207ENST00000496756 AAMPQ13685 434 aa16.78■□□□□ 0.28
PHGDH-207ENST00000496756 KIF4BQ2VIQ3 1234 aa16.78■□□□□ 0.28
PHGDH-207ENST00000496756 COPS6Q7L5N1 327 aa16.78■□□□□ 0.28
PHGDH-207ENST00000496756 RIMBP2O15034 1052 aa16.77■□□□□ 0.28
PHGDH-207ENST00000496756 ZNF853P0CG23 659 aa16.77■□□□□ 0.28
PHGDH-207ENST00000496756 RARSP54136 660 aaKnown RBP16.77■□□□□ 0.28
PHGDH-207ENST00000496756 FKBP1BP68106 108 aa16.77■□□□□ 0.28
PHGDH-207ENST00000496756 AIMP1Q12904 312 aaKnown RBP16.77■□□□□ 0.28
PHGDH-207ENST00000496756 PROSER3Q2NL68 480 aa16.77■□□□□ 0.28
PHGDH-207ENST00000496756 BABAM1Q9NWV8 329 aa16.77■□□□□ 0.28
PHGDH-207ENST00000496756 GGA3Q9NZ52 723 aa16.77■□□□□ 0.28
PHGDH-207ENST00000496756 HPS5Q9UPZ3 1129 aa16.77■□□□□ 0.28
PHGDH-207ENST00000496756 TAF1P21675 1872 aa16.77■□□□□ 0.27
PHGDH-207ENST00000496756 DDX60Q8IY21 1712 aaKnown RBP16.76■□□□□ 0.27
PHGDH-207ENST00000496756 ANXA1P04083 346 aa16.76■□□□□ 0.27
PHGDH-207ENST00000496756 ALDH1L2Q3SY69 923 aa16.76■□□□□ 0.27
PHGDH-207ENST00000496756 XAGE3Q8WTP9 111 aa16.76■□□□□ 0.27
PHGDH-207ENST00000496756 POLLQ9UGP5 575 aa16.76■□□□□ 0.27
PHGDH-207ENST00000496756 HDAC9Q9UKV0 1011 aa16.76■□□□□ 0.27
PHGDH-207ENST00000496756 VIL1P09327 827 aaKnown RBP16.75■□□□□ 0.27
PHGDH-207ENST00000496756 SF3B3Q15393 1217 aaKnown RBP16.75■□□□□ 0.27
PHGDH-207ENST00000496756 RASAL3Q86YV0 1011 aa16.75■□□□□ 0.27
PHGDH-207ENST00000496756 CDCA5Q96FF9 252 aa16.75■□□□□ 0.27
PHGDH-207ENST00000496756 RTL9Q8NET4 1388 aa16.75■□□□□ 0.27
PHGDH-207ENST00000496756 GPSM2P81274 684 aa16.74■□□□□ 0.27
PHGDH-207ENST00000496756 EXOSC9Q06265 439 aaKnown RBP16.74■□□□□ 0.27
PHGDH-207ENST00000496756 DOK7Q18PE1 504 aa16.74■□□□□ 0.27
PHGDH-207ENST00000496756 CELF1Q92879 486 aaKnown RBP16.74■□□□□ 0.27
PHGDH-207ENST00000496756 GCC1Q96CN9 775 aa16.74■□□□□ 0.27
PHGDH-207ENST00000496756 CCDC136Q96JN2 1154 aa16.74■□□□□ 0.27
PHGDH-207ENST00000496756 ZC3H12CQ9C0D7 883 aaKnown RBP16.74■□□□□ 0.27
PHGDH-207ENST00000496756 KCNQ5Q9NR82 932 aa16.74■□□□□ 0.27
PHGDH-207ENST00000496756 G3V3G9 751 aa16.73■□□□□ 0.27
PHGDH-207ENST00000496756 DCAF8Q5TAQ9 597 aa16.73■□□□□ 0.27
PHGDH-207ENST00000496756 NECTIN2Q92692 538 aa16.73■□□□□ 0.27
PHGDH-207ENST00000496756 TSR2Q969E8 191 aaKnown RBP16.73■□□□□ 0.27
PHGDH-207ENST00000496756 KIF16BQ96L93 1317 aa16.72■□□□□ 0.27
PHGDH-207ENST00000496756 IPO8O15397 1037 aaKnown RBP16.72■□□□□ 0.27
PHGDH-207ENST00000496756 AGBL3Q8NEM8 1001 aa16.72■□□□□ 0.27
PHGDH-207ENST00000496756 TBC1D16Q8TBP0 767 aa16.72■□□□□ 0.27
PHGDH-207ENST00000496756 CHMP4AQ9BY43 222 aa16.72■□□□□ 0.27
PHGDH-207ENST00000496756 PAPPA2Q9BXP8 1791 aa16.72■□□□□ 0.27
PHGDH-207ENST00000496756 CHL1O00533 1208 aa16.71■□□□□ 0.27
PHGDH-207ENST00000496756 ZNF280AP59817 542 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-207ENST00000496756 RPS8P62241 208 aaKnown RBP16.71■□□□□ 0.27
PHGDH-207ENST00000496756 SCARF1Q14162 830 aa16.71■□□□□ 0.27
PHGDH-207ENST00000496756 NOM1Q5C9Z4 860 aaKnown RBP16.71■□□□□ 0.27
PHGDH-207ENST00000496756 ANGEL2Q5VTE6 544 aaKnown RBP16.71■□□□□ 0.27
PHGDH-207ENST00000496756 ZNF296Q8WUU4 475 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-207ENST00000496756 FAM89AQ96GI7 184 aa16.71■□□□□ 0.27
PHGDH-207ENST00000496756 LAS1LQ9Y4W2 734 aaKnown RBP16.71■□□□□ 0.27
PHGDH-207ENST00000496756 ASTN2O75129 1339 aaPredicted RBP16.7■□□□□ 0.26
PHGDH-207ENST00000496756 PITPNM2Q9BZ72 1349 aa16.7■□□□□ 0.26
PHGDH-207ENST00000496756 ZNF609O15014 1411 aa16.7■□□□□ 0.26
PHGDH-207ENST00000496756 BCAR3O75815 825 aa16.7■□□□□ 0.26
PHGDH-207ENST00000496756 PLBD2Q8NHP8 589 aa16.7■□□□□ 0.26
PHGDH-207ENST00000496756 MBIPQ9NS73 344 aa16.7■□□□□ 0.26
PHGDH-207ENST00000496756 PODXL2Q9NZ53 605 aa16.7■□□□□ 0.26
PHGDH-207ENST00000496756 PLIN1O60240 522 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms