RNA–Protein interactions for RNA: ENST00000496524.5

NPHP1-211, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 10,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-211ENST00000496524 PSMA7O14818 248 aa9.29□□□□□ -0.92
NPHP1-211ENST00000496524 SLC4A2P04920 1241 aa9.29□□□□□ -0.92
NPHP1-211ENST00000496524 HMOX1P09601 288 aa9.29□□□□□ -0.92
NPHP1-211ENST00000496524 ZNF213O14771 459 aa9.29□□□□□ -0.92
NPHP1-211ENST00000496524 CCDC42Q96M95 316 aa9.29□□□□□ -0.92
NPHP1-211ENST00000496524 ERCC5P28715 1186 aaPredicted RBP9.29□□□□□ -0.92
NPHP1-211ENST00000496524 HSPA1LP34931 641 aa9.29□□□□□ -0.92
NPHP1-211ENST00000496524 WDR78Q5VTH9 848 aa9.29□□□□□ -0.92
NPHP1-211ENST00000496524 IFT20Q8IY31 132 aa9.29□□□□□ -0.92
NPHP1-211ENST00000496524 HDGFL1Q5TGJ6 251 aa9.28□□□□□ -0.92
NPHP1-211ENST00000496524 CCDC82Q8N4S0 544 aa9.28□□□□□ -0.92
NPHP1-211ENST00000496524 PLEKHH2Q8IVE3 1493 aa9.28□□□□□ -0.92
NPHP1-211ENST00000496524 CEP104O60308 925 aa9.28□□□□□ -0.92
NPHP1-211ENST00000496524 SYT1P21579 422 aa9.28□□□□□ -0.92
NPHP1-211ENST00000496524 MPHOSPH6Q99547 160 aaKnown RBP9.28□□□□□ -0.92
NPHP1-211ENST00000496524 XAB2Q9HCS7 855 aaKnown RBP9.28□□□□□ -0.92
NPHP1-211ENST00000496524 SRGAP3O43295 1099 aa9.28□□□□□ -0.92
NPHP1-211ENST00000496524 TCP11L2Q8N4U5 519 aa9.28□□□□□ -0.92
NPHP1-211ENST00000496524 NAPBQ9H115 298 aa9.28□□□□□ -0.92
NPHP1-211ENST00000496524 PUF60Q9UHX1 559 aaKnown RBP9.28□□□□□ -0.92
NPHP1-211ENST00000496524 LRRC23Q53EV4 343 aaPredicted RBP9.28□□□□□ -0.92
NPHP1-211ENST00000496524 DACT3Q96B18 629 aaPredicted RBP9.28□□□□□ -0.92
NPHP1-211ENST00000496524 DRC3Q9H069 523 aa9.28□□□□□ -0.92
NPHP1-211ENST00000496524 PPP1R2P41236 205 aa9.28□□□□□ -0.92
NPHP1-211ENST00000496524 ZNF131P52739 623 aa9.28□□□□□ -0.92
NPHP1-211ENST00000496524 ATP2A3Q93084 1043 aa9.28□□□□□ -0.92
NPHP1-211ENST00000496524 ATP6V0A2Q9Y487 856 aa9.28□□□□□ -0.92
NPHP1-211ENST00000496524 TXNDC9O14530 226 aa9.28□□□□□ -0.92
NPHP1-211ENST00000496524 IMPG2Q9BZV3 1241 aa9.28□□□□□ -0.92
NPHP1-211ENST00000496524 SYF2O95926 243 aaKnown RBP9.28□□□□□ -0.92
NPHP1-211ENST00000496524 SYKP43405 635 aa9.28□□□□□ -0.92
NPHP1-211ENST00000496524 HAUS2Q9NVX0 235 aa9.28□□□□□ -0.92
NPHP1-211ENST00000496524 TMOD2Q9NZR1 351 aa9.28□□□□□ -0.92
NPHP1-211ENST00000496524 OPHN1O60890 802 aa9.27□□□□□ -0.92
NPHP1-211ENST00000496524 TTF1Q15361 905 aaPredicted RBP9.27□□□□□ -0.93
NPHP1-211ENST00000496524 SLF2Q8IX21 1173 aa9.27□□□□□ -0.93
NPHP1-211ENST00000496524 SIL1Q9H173 461 aa9.27□□□□□ -0.93
NPHP1-211ENST00000496524 HMG20BQ9P0W2 317 aa9.27□□□□□ -0.93
NPHP1-211ENST00000496524 RASEFQ8IZ41 740 aa9.27□□□□□ -0.93
NPHP1-211ENST00000496524 GOLGA8AA7E2F4 631 aa9.27□□□□□ -0.93
NPHP1-211ENST00000496524 GOLGA8BA8MQT2 603 aa9.27□□□□□ -0.93
NPHP1-211ENST00000496524 SPECC1L-ADORA2AF8WAN1 911 aa9.27□□□□□ -0.93
NPHP1-211ENST00000496524 EXOSC9Q06265 439 aaKnown RBP9.27□□□□□ -0.93
NPHP1-211ENST00000496524 CNGA4Q8IV77 575 aa9.27□□□□□ -0.93
NPHP1-211ENST00000496524 MAK16Q9BXY0 300 aaKnown RBP9.27□□□□□ -0.93
NPHP1-211ENST00000496524 I3L4J1 428 aa9.27□□□□□ -0.93
NPHP1-211ENST00000496524 ERMNQ8TAM6 284 aa9.27□□□□□ -0.93
NPHP1-211ENST00000496524 SCINQ9Y6U3 715 aa9.27□□□□□ -0.93
NPHP1-211ENST00000496524 CUX2O14529 1486 aa9.27□□□□□ -0.93
NPHP1-211ENST00000496524 DIXDC1Q155Q3 683 aa9.27□□□□□ -0.93
NPHP1-211ENST00000496524 RASIP1Q5U651 963 aa9.27□□□□□ -0.93
NPHP1-211ENST00000496524 FERMT3Q86UX7 667 aa9.27□□□□□ -0.93
NPHP1-211ENST00000496524 ZNF444Q8N0Y2 327 aaPredicted RBP9.27□□□□□ -0.93
NPHP1-211ENST00000496524 IFT81Q8WYA0 676 aa9.27□□□□□ -0.93
NPHP1-211ENST00000496524 TBCAO75347 108 aaKnown RBP9.27□□□□□ -0.93
NPHP1-211ENST00000496524 PLCB3Q01970 1234 aa9.27□□□□□ -0.93
NPHP1-211ENST00000496524 ANKRD20A3Q5VUR7 823 aa9.27□□□□□ -0.93
NPHP1-211ENST00000496524 RILPL1Q5EBL4 403 aa9.26□□□□□ -0.93
NPHP1-211ENST00000496524 SEL1L2Q5TEA6 688 aa9.26□□□□□ -0.93
NPHP1-211ENST00000496524 C1orf115Q9H7X2 142 aa9.26□□□□□ -0.93
NPHP1-211ENST00000496524 TLDC2A0PJX2 215 aa9.26□□□□□ -0.93
NPHP1-211ENST00000496524 RBM5P52756 815 aaKnown RBP eCLIP9.26□□□□□ -0.93
NPHP1-211ENST00000496524 MTMR3Q13615 1198 aa9.26□□□□□ -0.93
NPHP1-211ENST00000496524 CXorf38Q8TB03 319 aa9.26□□□□□ -0.93
NPHP1-211ENST00000496524 PPP1R9AQ9ULJ8 1098 aa9.26□□□□□ -0.93
NPHP1-211ENST00000496524 GOLGA8QA0A0J9YX86 632 aa9.26□□□□□ -0.93
NPHP1-211ENST00000496524 GOLGA8OA6NCC3 632 aa9.26□□□□□ -0.93
NPHP1-211ENST00000496524 GOLGA8NF8WBI6 632 aa9.26□□□□□ -0.93
NPHP1-211ENST00000496524 PPFIA4O75335 1185 aa9.26□□□□□ -0.93
NPHP1-211ENST00000496524 AMOTQ4VCS5 1084 aa9.26□□□□□ -0.93
NPHP1-211ENST00000496524 ADAMTS8Q9UP79 889 aa9.26□□□□□ -0.93
NPHP1-211ENST00000496524 MINK1Q8N4C8 1332 aaPredicted RBP9.26□□□□□ -0.93
NPHP1-211ENST00000496524 ZC3H6P61129 1189 aaKnown RBP9.26□□□□□ -0.93
NPHP1-211ENST00000496524 TRIM14Q14142 442 aa9.26□□□□□ -0.93
NPHP1-211ENST00000496524 PARP2Q9UGN5 583 aa9.26□□□□□ -0.93
NPHP1-211ENST00000496524 ERCC6Q03468 1493 aa9.26□□□□□ -0.93
NPHP1-211ENST00000496524 ESRRGP62508 458 aa9.26□□□□□ -0.93
NPHP1-211ENST00000496524 ITIH3Q06033 890 aa9.26□□□□□ -0.93
NPHP1-211ENST00000496524 ANO6Q4KMQ2 910 aa9.26□□□□□ -0.93
NPHP1-211ENST00000496524 CCDC89Q8N998 374 aa9.26□□□□□ -0.93
NPHP1-211ENST00000496524 FLIIQ13045 1269 aa9.26□□□□□ -0.93
NPHP1-211ENST00000496524 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.26□□□□□ -0.93
NPHP1-211ENST00000496524 POLE3Q9NRF9 147 aa9.26□□□□□ -0.93
NPHP1-211ENST00000496524 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.26□□□□□ -0.93
NPHP1-211ENST00000496524 PALM3A6NDB9 673 aaPredicted RBP9.25□□□□□ -0.93
NPHP1-211ENST00000496524 ATP6V1E1P36543 226 aa9.25□□□□□ -0.93
NPHP1-211ENST00000496524 IGHMBP2P38935 993 aaKnown RBP9.25□□□□□ -0.93
NPHP1-211ENST00000496524 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.25□□□□□ -0.93
NPHP1-211ENST00000496524 HELBQ8NG08 1087 aaPredicted RBP9.25□□□□□ -0.93
NPHP1-211ENST00000496524 SDCCAG3Q96C92 435 aa9.25□□□□□ -0.93
NPHP1-211ENST00000496524 IARSP41252 1262 aaKnown RBP9.25□□□□□ -0.93
NPHP1-211ENST00000496524 PPP2R3AQ06190 1150 aa9.25□□□□□ -0.93
NPHP1-211ENST00000496524 GIMAP4Q9NUV9 329 aa9.25□□□□□ -0.93
NPHP1-211ENST00000496524 RNF40O75150 1001 aa9.25□□□□□ -0.93
NPHP1-211ENST00000496524 KRT3P12035 628 aa9.25□□□□□ -0.93
NPHP1-211ENST00000496524 MAP3K12Q12852 859 aa9.25□□□□□ -0.93
NPHP1-211ENST00000496524 ZNF354CQ86Y25 554 aa9.25□□□□□ -0.93
NPHP1-211ENST00000496524 PSPC1Q8WXF1 523 aaKnown RBP9.25□□□□□ -0.93
NPHP1-211ENST00000496524 IDEP14735 1019 aa9.25□□□□□ -0.93
NPHP1-211ENST00000496524 STAT6P42226 847 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms