RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	PPP1R42	Q7Z4L9	355 aa		10.37	□□□□□ -0.75
NVL-223	ENST00000496393	USP48	Q86UV5	1035 aa		10.37	□□□□□ -0.75
NVL-223	ENST00000496393	PNISR	Q8TF01	805 aa	Known RBP	10.37	□□□□□ -0.75
NVL-223	ENST00000496393	UTP14A	Q9BVJ6	771 aa	Known RBP	10.37	□□□□□ -0.75
NVL-223	ENST00000496393	DUOX1	Q9NRD9	1551 aa		10.36	□□□□□ -0.75
NVL-223	ENST00000496393	YDJC	A8MPS7	323 aa		10.36	□□□□□ -0.75
NVL-223	ENST00000496393	EIF2S2	P20042	333 aa	Known RBP	10.36	□□□□□ -0.75
NVL-223	ENST00000496393	SOX10	P56693	466 aa		10.36	□□□□□ -0.75
NVL-223	ENST00000496393	HUNK	P57058	714 aa		10.36	□□□□□ -0.75
NVL-223	ENST00000496393	PARP10	Q53GL7	1025 aa		10.36	□□□□□ -0.75
NVL-223	ENST00000496393	MICALL2	Q8IY33	904 aa		10.36	□□□□□ -0.75
NVL-223	ENST00000496393	MPND	Q8N594	471 aa		10.36	□□□□□ -0.75
NVL-223	ENST00000496393	SUPT20H	Q8NEM7	779 aa		10.36	□□□□□ -0.75
NVL-223	ENST00000496393	CNOT7	Q9UIV1	285 aa	Known RBP	10.36	□□□□□ -0.75
NVL-223	ENST00000496393	ANKRD36C	Q5JPF3	1778 aa		10.36	□□□□□ -0.75
NVL-223	ENST00000496393	ADM5	C9JUS6	153 aa		10.35	□□□□□ -0.75
NVL-223	ENST00000496393	NEFM	P07197	916 aa		10.35	□□□□□ -0.75
NVL-223	ENST00000496393	KIAA2012	Q0VF49	1180 aa		10.35	□□□□□ -0.75
NVL-223	ENST00000496393	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	10.35	□□□□□ -0.75
NVL-223	ENST00000496393	CDC37L1	Q7L3B6	337 aa		10.35	□□□□□ -0.75
NVL-223	ENST00000496393	SAMD7	Q7Z3H4	446 aa		10.35	□□□□□ -0.75
NVL-223	ENST00000496393	NECTIN2	Q92692	538 aa		10.35	□□□□□ -0.75
NVL-223	ENST00000496393	RTFDC1	Q9BY42	306 aa	Predicted RBP	10.35	□□□□□ -0.75
NVL-223	ENST00000496393	PDE4DIP	Q5VU43	2346 aa		10.35	□□□□□ -0.75
NVL-223	ENST00000496393	CDHR2	Q9BYE9	1310 aa		10.34	□□□□□ -0.75
NVL-223	ENST00000496393	EGFR	P00533	1210 aa		10.34	□□□□□ -0.75
NVL-223	ENST00000496393	AIMP1	Q12904	312 aa	Known RBP	10.34	□□□□□ -0.75
NVL-223	ENST00000496393	NOG	Q13253	232 aa		10.34	□□□□□ -0.75
NVL-223	ENST00000496393	TNIP1	Q15025	636 aa		10.34	□□□□□ -0.75
NVL-223	ENST00000496393	NFE2L2	Q16236	605 aa		10.34	□□□□□ -0.75
NVL-223	ENST00000496393	SLC10A5	Q5PT55	438 aa		10.34	□□□□□ -0.75
NVL-223	ENST00000496393	DDX46	Q7L014	1031 aa	Known RBP	10.34	□□□□□ -0.75
NVL-223	ENST00000496393	SP8	Q8IXZ3	490 aa		10.34	□□□□□ -0.75
NVL-223	ENST00000496393	HHIPL1	Q96JK4	782 aa		10.34	□□□□□ -0.75
NVL-223	ENST00000496393	DBNDD1	Q9H9R9	158 aa		10.34	□□□□□ -0.75
NVL-223	ENST00000496393	PGAP2	Q9UHJ9	254 aa		10.34	□□□□□ -0.75
NVL-223	ENST00000496393	TSPYL4	Q9UJ04	414 aa		10.34	□□□□□ -0.75
NVL-223	ENST00000496393	FBXO3	Q9UK99	471 aa		10.34	□□□□□ -0.75
NVL-223	ENST00000496393	ERBB4	Q15303	1308 aa		10.33	□□□□□ -0.76
NVL-223	ENST00000496393	TNRC18	O15417	2968 aa	Predicted RBP	10.33	□□□□□ -0.76
NVL-223	ENST00000496393		H7C1D1	291 aa		10.33	□□□□□ -0.76
NVL-223	ENST00000496393	RIMBP2	O15034	1052 aa		10.33	□□□□□ -0.76
NVL-223	ENST00000496393	BBOX1	O75936	387 aa		10.33	□□□□□ -0.76
NVL-223	ENST00000496393	GRAP	Q13588	217 aa		10.33	□□□□□ -0.76
NVL-223	ENST00000496393	PDIA6	Q15084	440 aa		10.33	□□□□□ -0.76
NVL-223	ENST00000496393	RBM26	Q5T8P6	1007 aa	Known RBP	10.33	□□□□□ -0.76
NVL-223	ENST00000496393	KRT26	Q7Z3Y9	468 aa		10.33	□□□□□ -0.76
NVL-223	ENST00000496393	LRP10	Q7Z4F1	713 aa		10.33	□□□□□ -0.76
NVL-223	ENST00000496393	NLRP10	Q86W26	655 aa		10.33	□□□□□ -0.76
NVL-223	ENST00000496393	GRAPL	Q8TC17	118 aa	Predicted RBP	10.33	□□□□□ -0.76
NVL-223	ENST00000496393	ZC3H15	Q8WU90	426 aa	Known RBP	10.33	□□□□□ -0.76
NVL-223	ENST00000496393	VPS33B	Q9H267	617 aa		10.33	□□□□□ -0.76
NVL-223	ENST00000496393	COL4A1	P02462	1669 aa		10.33	□□□□□ -0.76
NVL-223	ENST00000496393	LRRC37A	A6NMS7	1700 aa		10.33	□□□□□ -0.76
NVL-223	ENST00000496393	MAPK8IP3	Q9UPT6	1336 aa		10.33	□□□□□ -0.76
NVL-223	ENST00000496393	FAM155A	B1AL88	458 aa	Predicted RBP	10.32	□□□□□ -0.76
NVL-223	ENST00000496393	PSMD14	O00487	310 aa		10.32	□□□□□ -0.76
NVL-223	ENST00000496393	KIF23	Q02241	960 aa	Predicted RBP	10.32	□□□□□ -0.76
NVL-223	ENST00000496393	RGMB	Q6NW40	437 aa		10.32	□□□□□ -0.76
NVL-223	ENST00000496393	XAGE3	Q8WTP9	111 aa		10.32	□□□□□ -0.76
NVL-223	ENST00000496393	PLEKHF1	Q96S99	279 aa		10.32	□□□□□ -0.76
NVL-223	ENST00000496393	GBA2	Q9HCG7	927 aa	Predicted RBP	10.32	□□□□□ -0.76
NVL-223	ENST00000496393	TRMT112	Q9UI30	125 aa	Known RBP	10.32	□□□□□ -0.76
NVL-223	ENST00000496393	DDX60	Q8IY21	1712 aa	Known RBP	10.32	□□□□□ -0.76
NVL-223	ENST00000496393	ASTN2	O75129	1339 aa	Predicted RBP	10.32	□□□□□ -0.76
NVL-223	ENST00000496393	SH3TC1	Q8TE82	1336 aa		10.32	□□□□□ -0.76
NVL-223	ENST00000496393	TRPA1	O75762	1119 aa		10.31	□□□□□ -0.76
NVL-223	ENST00000496393	ZNF157	P51786	506 aa	Predicted RBP	10.31	□□□□□ -0.76
NVL-223	ENST00000496393	DOK7	Q18PE1	504 aa		10.31	□□□□□ -0.76
NVL-223	ENST00000496393	COPS6	Q7L5N1	327 aa		10.31	□□□□□ -0.76
NVL-223	ENST00000496393	KCNQ5	Q9NR82	932 aa		10.31	□□□□□ -0.76
NVL-223	ENST00000496393	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.31	□□□□□ -0.76
NVL-223	ENST00000496393	POLR2A	P24928	1970 aa	Known RBP	10.3	□□□□□ -0.76
NVL-223	ENST00000496393	RTL9	Q8NET4	1388 aa		10.3	□□□□□ -0.76
NVL-223	ENST00000496393	C6orf229	H3BNL8	230 aa		10.3	□□□□□ -0.76
NVL-223	ENST00000496393	ECE2	O60344	883 aa		10.3	□□□□□ -0.76
NVL-223	ENST00000496393	VASP	P50552	380 aa	Predicted RBP	10.3	□□□□□ -0.76
NVL-223	ENST00000496393	KRT24	Q2M2I5	525 aa		10.3	□□□□□ -0.76
NVL-223	ENST00000496393	WASHC4	Q2M389	1173 aa		10.3	□□□□□ -0.76
NVL-223	ENST00000496393	HSP90AB3P	Q58FF7	597 aa		10.3	□□□□□ -0.76
NVL-223	ENST00000496393	RTL5	Q5HYW3	569 aa	Predicted RBP	10.3	□□□□□ -0.76
NVL-223	ENST00000496393	C2orf69	Q8N8R5	385 aa		10.3	□□□□□ -0.76
NVL-223	ENST00000496393	CELF1	Q92879	486 aa	Known RBP	10.3	□□□□□ -0.76
NVL-223	ENST00000496393	RNF186	Q9NXI6	227 aa		10.3	□□□□□ -0.76
NVL-223	ENST00000496393	GGA3	Q9NZ52	723 aa		10.3	□□□□□ -0.76
NVL-223	ENST00000496393	GPSM2	P81274	684 aa		10.29	□□□□□ -0.76
NVL-223	ENST00000496393	TCIRG1	Q13488	830 aa		10.29	□□□□□ -0.76
NVL-223	ENST00000496393	KIF4B	Q2VIQ3	1234 aa		10.29	□□□□□ -0.76
NVL-223	ENST00000496393	DCPS	Q96C86	337 aa	Known RBP	10.29	□□□□□ -0.76
NVL-223	ENST00000496393	POLL	Q9UGP5	575 aa		10.29	□□□□□ -0.76
NVL-223	ENST00000496393	AKAP11	Q9UKA4	1901 aa		10.29	□□□□□ -0.76
NVL-223	ENST00000496393	SCN9A	Q15858	1988 aa		10.28	□□□□□ -0.76
NVL-223	ENST00000496393	ATP5J2-PTCD1	G3V325	749 aa		10.28	□□□□□ -0.76
NVL-223	ENST00000496393	SULF1	Q8IWU6	871 aa		10.28	□□□□□ -0.76
NVL-223	ENST00000496393	PDCD7	Q8N8D1	485 aa	Known RBP	10.28	□□□□□ -0.76
NVL-223	ENST00000496393	DPF2	Q92785	391 aa		10.28	□□□□□ -0.76
NVL-223	ENST00000496393	CCDC102A	Q96A19	550 aa		10.28	□□□□□ -0.76
NVL-223	ENST00000496393	CDCA5	Q96FF9	252 aa		10.28	□□□□□ -0.76
NVL-223	ENST00000496393	FAM89A	Q96GI7	184 aa		10.28	□□□□□ -0.76
NVL-223	ENST00000496393	SAGE1	Q9NXZ1	904 aa		10.28	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms