RNA–Protein interactions for RNA: ENST00000495934.2

C9orf78-207, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-207ENST00000495934 MKRN3Q13064 507 aaKnown RBP13.58□□□□□ -0.24
C9orf78-207ENST00000495934 CNGB1Q14028 1251 aaPredicted RBP13.58□□□□□ -0.24
C9orf78-207ENST00000495934 R3HDMLQ9H3Y0 253 aa13.58□□□□□ -0.24
C9orf78-207ENST00000495934 KCNQ5Q9NR82 932 aa13.58□□□□□ -0.24
C9orf78-207ENST00000495934 MIS18AQ9NYP9 233 aa13.58□□□□□ -0.24
C9orf78-207ENST00000495934 TRIM17Q9Y577 477 aa13.58□□□□□ -0.24
C9orf78-207ENST00000495934 UBE2Q2LH0YL09 131 aa13.57□□□□□ -0.24
C9orf78-207ENST00000495934 RIMBP2O15034 1052 aa13.57□□□□□ -0.24
C9orf78-207ENST00000495934 HCLS1P14317 486 aaPredicted RBP13.57□□□□□ -0.24
C9orf78-207ENST00000495934 SREBF2Q12772 1141 aa13.57□□□□□ -0.24
C9orf78-207ENST00000495934 SCARF1Q14162 830 aa13.57□□□□□ -0.24
C9orf78-207ENST00000495934 TMC4Q7Z404 712 aa13.57□□□□□ -0.24
C9orf78-207ENST00000495934 CFHR5Q9BXR6 569 aa13.57□□□□□ -0.24
C9orf78-207ENST00000495934 KDM3BQ7LBC6 1761 aa13.57□□□□□ -0.24
C9orf78-207ENST00000495934 EN2P19622 333 aaPredicted RBP13.56□□□□□ -0.24
C9orf78-207ENST00000495934 TAF7Q15545 349 aaPredicted RBP13.56□□□□□ -0.24
C9orf78-207ENST00000495934 DOK7Q18PE1 504 aa13.56□□□□□ -0.24
C9orf78-207ENST00000495934 SLC17A8Q8NDX2 589 aa13.56□□□□□ -0.24
C9orf78-207ENST00000495934 C6orf229H3BNL8 230 aa13.55□□□□□ -0.24
C9orf78-207ENST00000495934 VIL1P09327 827 aaKnown RBP13.55□□□□□ -0.24
C9orf78-207ENST00000495934 TTLL12Q14166 644 aaPredicted RBP13.55□□□□□ -0.24
C9orf78-207ENST00000495934 OTOP1Q7RTM1 612 aa13.55□□□□□ -0.24
C9orf78-207ENST00000495934 POLLQ9UGP5 575 aa13.55□□□□□ -0.24
C9orf78-207ENST00000495934 NSFL1CQ9UNZ2 370 aaKnown RBP13.55□□□□□ -0.24
C9orf78-207ENST00000495934 ZNF280AP59817 542 aaPredicted RBP13.54□□□□□ -0.24
C9orf78-207ENST00000495934 SCAF8Q9UPN6 1271 aaKnown RBP13.54□□□□□ -0.24
C9orf78-207ENST00000495934 PITPNM2Q9BZ72 1349 aa13.54□□□□□ -0.24
C9orf78-207ENST00000495934 HTATSF1O43719 755 aaKnown RBP13.53□□□□□ -0.24
C9orf78-207ENST00000495934 PPP2R1AP30153 589 aa13.53□□□□□ -0.24
C9orf78-207ENST00000495934 EYA3Q99504 573 aa13.53□□□□□ -0.24
C9orf78-207ENST00000495934 PSME4Q14997 1843 aa13.53□□□□□ -0.24
C9orf78-207ENST00000495934 EIF4A1P60842 406 aaKnown RBP13.52□□□□□ -0.25
C9orf78-207ENST00000495934 GPSM2P81274 684 aa13.52□□□□□ -0.25
C9orf78-207ENST00000495934 PRAMEF18Q5VWM3 479 aa13.52□□□□□ -0.25
C9orf78-207ENST00000495934 ARMC5Q96C12 935 aa13.52□□□□□ -0.25
C9orf78-207ENST00000495934 ZNF609O15014 1411 aa13.52□□□□□ -0.25
C9orf78-207ENST00000495934 ERBB4Q15303 1308 aa13.51□□□□□ -0.25
C9orf78-207ENST00000495934 SH3TC1Q8TE82 1336 aa13.51□□□□□ -0.25
C9orf78-207ENST00000495934 H0YGN5 161 aa13.51□□□□□ -0.25
C9orf78-207ENST00000495934 ALDH1A1P00352 501 aa13.51□□□□□ -0.25
C9orf78-207ENST00000495934 TCIRG1Q13488 830 aa13.51□□□□□ -0.25
C9orf78-207ENST00000495934 NLRP10Q86W26 655 aa13.51□□□□□ -0.25
C9orf78-207ENST00000495934 AGBL3Q8NEM8 1001 aa13.51□□□□□ -0.25
C9orf78-207ENST00000495934 PNISRQ8TF01 805 aaKnown RBP13.51□□□□□ -0.25
C9orf78-207ENST00000495934 OTUD5Q96G74 571 aa13.51□□□□□ -0.25
C9orf78-207ENST00000495934 THUMPD2Q9BTF0 503 aaKnown RBP13.51□□□□□ -0.25
C9orf78-207ENST00000495934 TRMT112Q9UI30 125 aaKnown RBP13.51□□□□□ -0.25
C9orf78-207ENST00000495934 PTPN22Q9Y2R2 807 aa13.51□□□□□ -0.25
C9orf78-207ENST00000495934 RSBN1LQ6PCB5 846 aaPredicted RBP13.5□□□□□ -0.25
C9orf78-207ENST00000495934 TBC1D16Q8TBP0 767 aa13.5□□□□□ -0.25
C9orf78-207ENST00000495934 CELF1Q92879 486 aaKnown RBP13.5□□□□□ -0.25
C9orf78-207ENST00000495934 TMEM106CQ9BVX2 250 aa13.5□□□□□ -0.25
C9orf78-207ENST00000495934 MYOZ2Q9NPC6 264 aa13.5□□□□□ -0.25
C9orf78-207ENST00000495934 DLG5Q8TDM6 1919 aa13.5□□□□□ -0.25
C9orf78-207ENST00000495934 COL4A1P02462 1669 aa13.5□□□□□ -0.25
C9orf78-207ENST00000495934 G3V3G9 751 aa13.49□□□□□ -0.25
C9orf78-207ENST00000495934 NF2P35240 595 aa13.49□□□□□ -0.25
C9orf78-207ENST00000495934 PTPN12Q05209 780 aaKnown RBP13.49□□□□□ -0.25
C9orf78-207ENST00000495934 HSP90AB3PQ58FF7 597 aa13.49□□□□□ -0.25
C9orf78-207ENST00000495934 DCAF8Q5TAQ9 597 aa13.49□□□□□ -0.25
C9orf78-207ENST00000495934 CHRDL2Q6WN34 429 aa13.49□□□□□ -0.25
C9orf78-207ENST00000495934 LRP10Q7Z4F1 713 aa13.49□□□□□ -0.25
C9orf78-207ENST00000495934 ERO1AQ96HE7 468 aa13.49□□□□□ -0.25
C9orf78-207ENST00000495934 ZC3H12CQ9C0D7 883 aaKnown RBP13.49□□□□□ -0.25
C9orf78-207ENST00000495934 USP17L8P0C7I0 530 aa13.48□□□□□ -0.25
C9orf78-207ENST00000495934 U2AF1L5P0DN76 240 aaPredicted RBP13.48□□□□□ -0.25
C9orf78-207ENST00000495934 U2AF1Q01081 240 aaKnown RBP eCLIP13.48□□□□□ -0.25
C9orf78-207ENST00000495934 SPRYD7Q5W111 196 aa13.48□□□□□ -0.25
C9orf78-207ENST00000495934 IFNL1Q8IU54 200 aa13.48□□□□□ -0.25
C9orf78-207ENST00000495934 CD99L2Q8TCZ2 262 aa13.48□□□□□ -0.25
C9orf78-207ENST00000495934 NECTIN2Q92692 538 aa13.48□□□□□ -0.25
C9orf78-207ENST00000495934 CFAP53Q96M91 514 aa13.48□□□□□ -0.25
C9orf78-207ENST00000495934 NUDCQ9Y266 331 aa13.48□□□□□ -0.25
C9orf78-207ENST00000495934 RALBP1Q15311 655 aa13.47□□□□□ -0.25
C9orf78-207ENST00000495934 PROSER3Q2NL68 480 aa13.47□□□□□ -0.25
C9orf78-207ENST00000495934 ARMC9Q7Z3E5 817 aa13.47□□□□□ -0.25
C9orf78-207ENST00000495934 ZNF428Q96B54 188 aa13.47□□□□□ -0.25
C9orf78-207ENST00000495934 ZNF333Q96JL9 665 aa13.47□□□□□ -0.25
C9orf78-207ENST00000495934 GMLQ99445 158 aa13.47□□□□□ -0.25
C9orf78-207ENST00000495934 PRKRIP1Q9H875 184 aaPredicted RBP13.47□□□□□ -0.25
C9orf78-207ENST00000495934 EFCC1Q9HA90 598 aa13.47□□□□□ -0.25
C9orf78-207ENST00000495934 LAMB1P07942 1786 aa13.46□□□□□ -0.25
C9orf78-207ENST00000495934 MANSC4A6NHS7 340 aaPredicted RBP13.46□□□□□ -0.25
C9orf78-207ENST00000495934 UFL1O94874 794 aa13.46□□□□□ -0.25
C9orf78-207ENST00000495934 ANXA1P04083 346 aa13.46□□□□□ -0.25
C9orf78-207ENST00000495934 PRKG1Q13976 671 aa13.46□□□□□ -0.25
C9orf78-207ENST00000495934 PDIA6Q15084 440 aa13.46□□□□□ -0.25
C9orf78-207ENST00000495934 NBPF9Q3BBW0 867 aa13.46□□□□□ -0.25
C9orf78-207ENST00000495934 RBM27Q9P2N5 1060 aaKnown RBP13.46□□□□□ -0.25
C9orf78-207ENST00000495934 IGF2BP3O00425 579 aaKnown RBP eCLIP13.45□□□□□ -0.26
C9orf78-207ENST00000495934 EIF2S2P20042 333 aaKnown RBP13.45□□□□□ -0.26
C9orf78-207ENST00000495934 INHBEP58166 350 aa13.45□□□□□ -0.26
C9orf78-207ENST00000495934 SLC4A8Q2Y0W8 1093 aa13.45□□□□□ -0.26
C9orf78-207ENST00000495934 AIMP1Q12904 312 aaKnown RBP13.44□□□□□ -0.26
C9orf78-207ENST00000495934 SF3B3Q15393 1217 aaKnown RBP13.44□□□□□ -0.26
C9orf78-207ENST00000495934 LDLRAD1Q5T700 205 aa13.44□□□□□ -0.26
C9orf78-207ENST00000495934 PODXL2Q9NZ53 605 aa13.44□□□□□ -0.26
C9orf78-207ENST00000495934 ANKIB1Q9P2G1 1089 aa13.44□□□□□ -0.26
C9orf78-207ENST00000495934 GGA1Q9UJY5 639 aa13.44□□□□□ -0.26
C9orf78-207ENST00000495934 LAMA3Q16787 3333 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms