RNA–Protein interactions for RNA: ENST00000495794.5

BRD9-213, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 4,865 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-213ENST00000495794 MTIF2P46199 727 aaKnown RBP16.03■□□□□ 0.16
BRD9-213ENST00000495794 TNIP1Q15025 636 aa16.03■□□□□ 0.16
BRD9-213ENST00000495794 PTPRTO14522 1441 aa16.03■□□□□ 0.16
BRD9-213ENST00000495794 MBD5Q9P267 1494 aa16.03■□□□□ 0.16
BRD9-213ENST00000495794 AMPD3Q01432 767 aa16.03■□□□□ 0.16
BRD9-213ENST00000495794 RTN1Q16799 776 aa16.03■□□□□ 0.16
BRD9-213ENST00000495794 CALML4Q96GE6 196 aa16.03■□□□□ 0.16
BRD9-213ENST00000495794 BABAM1Q9NWV8 329 aa16.03■□□□□ 0.16
BRD9-213ENST00000495794 PRKCSHP14314 528 aaPredicted RBP16.03■□□□□ 0.16
BRD9-213ENST00000495794 TFCP2Q12800 502 aa16.03■□□□□ 0.16
BRD9-213ENST00000495794 BICC1Q9H694 974 aaKnown RBP16.03■□□□□ 0.16
BRD9-213ENST00000495794 ABCA8O94911 1581 aa16.03■□□□□ 0.16
BRD9-213ENST00000495794 CCDC191Q8NCU4 936 aa16.03■□□□□ 0.16
BRD9-213ENST00000495794 CLCN1P35523 988 aa16.02■□□□□ 0.16
BRD9-213ENST00000495794 VPS36Q86VN1 386 aa16.02■□□□□ 0.16
BRD9-213ENST00000495794 RAD50Q92878 1312 aa16.02■□□□□ 0.16
BRD9-213ENST00000495794 RNF113AO15541 343 aaKnown RBP16.02■□□□□ 0.16
BRD9-213ENST00000495794 USO1O60763 962 aaKnown RBP16.02■□□□□ 0.15
BRD9-213ENST00000495794 TDRD12Q587J7 1177 aaKnown RBP16.02■□□□□ 0.15
BRD9-213ENST00000495794 DHX32Q7L7V1 743 aaKnown RBP16.02■□□□□ 0.15
BRD9-213ENST00000495794 BMP15O95972 392 aa16.02■□□□□ 0.15
BRD9-213ENST00000495794 RFC4P35249 363 aa16.02■□□□□ 0.15
BRD9-213ENST00000495794 ATP6V1AP38606 617 aa16.02■□□□□ 0.15
BRD9-213ENST00000495794 SNW1Q13573 536 aaKnown RBP16.02■□□□□ 0.15
BRD9-213ENST00000495794 SLC4A8Q2Y0W8 1093 aa16.02■□□□□ 0.15
BRD9-213ENST00000495794 JAKMIP3Q5VZ66 844 aa16.02■□□□□ 0.15
BRD9-213ENST00000495794 CCDC186Q7Z3E2 898 aa16.02■□□□□ 0.15
BRD9-213ENST00000495794 NLRP3Q96P20 1036 aa16.02■□□□□ 0.15
BRD9-213ENST00000495794 KIAA0754O94854 1291 aa16.01■□□□□ 0.15
BRD9-213ENST00000495794 ENOX2Q16206 610 aaKnown RBP16.01■□□□□ 0.15
BRD9-213ENST00000495794 CUL5Q93034 780 aa16.01■□□□□ 0.15
BRD9-213ENST00000495794 ZNF830Q96NB3 372 aaPredicted RBP16.01■□□□□ 0.15
BRD9-213ENST00000495794 CCDC171Q6TFL3 1326 aa16.01■□□□□ 0.15
BRD9-213ENST00000495794 HOXB7P09629 217 aa16.01■□□□□ 0.15
BRD9-213ENST00000495794 NIP7Q9Y221 180 aaKnown RBP eCLIP16.01■□□□□ 0.15
BRD9-213ENST00000495794 GOLGA6L9A6NEM1 432 aa16.01■□□□□ 0.15
BRD9-213ENST00000495794 SYT1P21579 422 aa16.01■□□□□ 0.15
BRD9-213ENST00000495794 RUFY3Q7L099 469 aa16.01■□□□□ 0.15
BRD9-213ENST00000495794 CHST3Q7LGC8 479 aa16.01■□□□□ 0.15
BRD9-213ENST00000495794 CCDC150Q8NCX0 1101 aa16.01■□□□□ 0.15
BRD9-213ENST00000495794 DNAJC25Q9H1X3 360 aa16.01■□□□□ 0.15
BRD9-213ENST00000495794 SBNO1A3KN83 1393 aa16.01■□□□□ 0.15
BRD9-213ENST00000495794 MARCKSP29966 332 aaPredicted RBP16.01■□□□□ 0.15
BRD9-213ENST00000495794 IFIT1BQ5T764 474 aaKnown RBP16.01■□□□□ 0.15
BRD9-213ENST00000495794 NAA16Q6N069 864 aaPredicted RBP16.01■□□□□ 0.15
BRD9-213ENST00000495794 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16■□□□□ 0.15
BRD9-213ENST00000495794 N4BP3O15049 544 aa16■□□□□ 0.15
BRD9-213ENST00000495794 PAFAH1B1P43034 410 aa16■□□□□ 0.15
BRD9-213ENST00000495794 UBASH3AP57075 661 aa16■□□□□ 0.15
BRD9-213ENST00000495794 ACSBG1Q96GR2 724 aa16■□□□□ 0.15
BRD9-213ENST00000495794 PRIMPOLQ96LW4 560 aa16■□□□□ 0.15
BRD9-213ENST00000495794 SPTLC2O15270 562 aa16■□□□□ 0.15
BRD9-213ENST00000495794 DZIP3Q86Y13 1208 aaKnown RBP16■□□□□ 0.15
BRD9-213ENST00000495794 CBX1P83916 185 aa16■□□□□ 0.15
BRD9-213ENST00000495794 APOBRQ0VD83 1088 aa16■□□□□ 0.15
BRD9-213ENST00000495794 ZNF790Q6PG37 636 aa16■□□□□ 0.15
BRD9-213ENST00000495794 HELBQ8NG08 1087 aaPredicted RBP16■□□□□ 0.15
BRD9-213ENST00000495794 SIRT1Q96EB6 747 aa16■□□□□ 0.15
BRD9-213ENST00000495794 MAP9Q49MG5 647 aa15.99■□□□□ 0.15
BRD9-213ENST00000495794 TAX1BP1Q86VP1 789 aa15.99■□□□□ 0.15
BRD9-213ENST00000495794 SETDB2Q96T68 719 aa15.99■□□□□ 0.15
BRD9-213ENST00000495794 CGNQ9P2M7 1197 aaKnown RBP15.99■□□□□ 0.15
BRD9-213ENST00000495794 ZKSCAN5Q9Y2L8 839 aa15.99■□□□□ 0.15
BRD9-213ENST00000495794 BLMP54132 1417 aaPredicted RBP15.99■□□□□ 0.15
BRD9-213ENST00000495794 CPA1P15085 419 aa15.99■□□□□ 0.15
BRD9-213ENST00000495794 MATR3P43243 847 aaKnown RBP eCLIP15.99■□□□□ 0.15
BRD9-213ENST00000495794 IRS4O14654 1257 aaPredicted RBP15.99■□□□□ 0.15
BRD9-213ENST00000495794 SKILP12757 684 aa15.99■□□□□ 0.15
BRD9-213ENST00000495794 NOLC1Q14978 699 aaKnown RBP eCLIP15.99■□□□□ 0.15
BRD9-213ENST00000495794 DDB1Q16531 1140 aa15.99■□□□□ 0.15
BRD9-213ENST00000495794 ZNF219Q9P2Y4 722 aaPredicted RBP15.99■□□□□ 0.15
BRD9-213ENST00000495794 TYRO3Q06418 890 aa15.99■□□□□ 0.15
BRD9-213ENST00000495794 TAF3Q5VWG9 929 aa15.99■□□□□ 0.15
BRD9-213ENST00000495794 SMARCC1Q92922 1105 aaPredicted RBP15.99■□□□□ 0.15
BRD9-213ENST00000495794 GNG11P61952 73 aa15.98■□□□□ 0.15
BRD9-213ENST00000495794 UTP14AQ9BVJ6 771 aaKnown RBP15.98■□□□□ 0.15
BRD9-213ENST00000495794 PTPDC1A2A3K4 754 aa15.98■□□□□ 0.15
BRD9-213ENST00000495794 HLA-DOAP06340 250 aa15.98■□□□□ 0.15
BRD9-213ENST00000495794 AFMP43652 599 aa15.98■□□□□ 0.15
BRD9-213ENST00000495794 CCDC40Q4G0X9 1142 aa15.98■□□□□ 0.15
BRD9-213ENST00000495794 TMX1Q9H3N1 280 aa15.98■□□□□ 0.15
BRD9-213ENST00000495794 TTC12Q9H892 705 aaPredicted RBP15.98■□□□□ 0.15
BRD9-213ENST00000495794 GSTO1P78417 241 aa15.98■□□□□ 0.15
BRD9-213ENST00000495794 SEPT7Q16181 437 aaKnown RBP15.98■□□□□ 0.15
BRD9-213ENST00000495794 FBXO3Q9UK99 471 aa15.98■□□□□ 0.15
BRD9-213ENST00000495794 GNAQP50148 359 aa15.97■□□□□ 0.15
BRD9-213ENST00000495794 TIMM10P62072 90 aa15.97■□□□□ 0.15
BRD9-213ENST00000495794 CEP135Q66GS9 1140 aa15.97■□□□□ 0.15
BRD9-213ENST00000495794 SSR1P43307 286 aaKnown RBP15.97■□□□□ 0.15
BRD9-213ENST00000495794 DNA2P51530 1060 aa15.97■□□□□ 0.15
BRD9-213ENST00000495794 AOPEPQ8N6M6 819 aa15.97■□□□□ 0.15
BRD9-213ENST00000495794 LGR6Q9HBX8 967 aa15.97■□□□□ 0.15
BRD9-213ENST00000495794 PAXBP1Q9Y5B6 917 aa15.97■□□□□ 0.15
BRD9-213ENST00000495794 ERICH4A6NGS2 130 aa15.97■□□□□ 0.15
BRD9-213ENST00000495794 MYO5CQ9NQX4 1742 aa15.97■□□□□ 0.15
BRD9-213ENST00000495794 DYNC1I1O14576 645 aa15.97■□□□□ 0.15
BRD9-213ENST00000495794 TSPY3P0CV98 308 aa15.97■□□□□ 0.15
BRD9-213ENST00000495794 TSPY8P0CW00 308 aa15.97■□□□□ 0.15
BRD9-213ENST00000495794 HSP90AA4PQ58FG1 418 aa15.97■□□□□ 0.15
BRD9-213ENST00000495794 TCERG1LQ5VWI1 586 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms