RNA–Protein interactions for RNA: ENST00000494557.1

RAF1-212, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 1 (best)

Gene RAF1, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-212ENST00000494557 ZNF589Q86UQ0 364 aaPredicted RBP10.19□□□□□ -0.78
RAF1-212ENST00000494557 U3KPZ7 1027 aaPredicted RBP10.19□□□□□ -0.78
RAF1-212ENST00000494557 ADD1P35611 737 aaKnown RBP10.19□□□□□ -0.78
RAF1-212ENST00000494557 THRAP3Q9Y2W1 955 aaKnown RBP10.19□□□□□ -0.78
RAF1-212ENST00000494557 NAV1Q8NEY1 1877 aa10.19□□□□□ -0.78
RAF1-212ENST00000494557 PFKFB2O60825 505 aa10.18□□□□□ -0.78
RAF1-212ENST00000494557 IGSF3O75054 1194 aa10.18□□□□□ -0.78
RAF1-212ENST00000494557 HMGB1P09429 215 aaKnown RBP10.18□□□□□ -0.78
RAF1-212ENST00000494557 IFIT2P09913 472 aaKnown RBP10.18□□□□□ -0.78
RAF1-212ENST00000494557 TRHP20396 242 aaPredicted RBP10.18□□□□□ -0.78
RAF1-212ENST00000494557 MCTP1Q6DN14 999 aa10.18□□□□□ -0.78
RAF1-212ENST00000494557 NECTIN2Q92692 538 aa10.18□□□□□ -0.78
RAF1-212ENST00000494557 RILPL2Q969X0 211 aa10.18□□□□□ -0.78
RAF1-212ENST00000494557 FAM227BQ96M60 508 aa10.18□□□□□ -0.78
RAF1-212ENST00000494557 CYP46A1Q9Y6A2 500 aa10.18□□□□□ -0.78
RAF1-212ENST00000494557 A0A0U1RQG5 324 aaPredicted RBP10.18□□□□□ -0.78
RAF1-212ENST00000494557 TRIM6-TRIM34B2RNG4 842 aa10.18□□□□□ -0.78
RAF1-212ENST00000494557 G3BP1Q13283 466 aaKnown RBP eCLIP10.18□□□□□ -0.78
RAF1-212ENST00000494557 RBM33Q96EV2 1170 aaKnown RBP10.18□□□□□ -0.78
RAF1-212ENST00000494557 CWC25Q9NXE8 425 aaPredicted RBP10.18□□□□□ -0.78
RAF1-212ENST00000494557 DDX49Q9Y6V7 483 aaKnown RBP10.18□□□□□ -0.78
RAF1-212ENST00000494557 MYH1P12882 1939 aa10.18□□□□□ -0.78
RAF1-212ENST00000494557 PRIM1P49642 420 aaKnown RBP10.18□□□□□ -0.78
RAF1-212ENST00000494557 SLC39A6Q13433 755 aa10.18□□□□□ -0.78
RAF1-212ENST00000494557 TCIRG1Q13488 830 aa10.18□□□□□ -0.78
RAF1-212ENST00000494557 TAF7LQ5H9L4 462 aa10.18□□□□□ -0.78
RAF1-212ENST00000494557 MYD88Q99836 296 aa10.18□□□□□ -0.78
RAF1-212ENST00000494557 ATP6V1DQ9Y5K8 247 aa10.18□□□□□ -0.78
RAF1-212ENST00000494557 EYA2O00167 538 aa10.17□□□□□ -0.78
RAF1-212ENST00000494557 FGFR2P21802 821 aa10.17□□□□□ -0.78
RAF1-212ENST00000494557 ARID4AP29374 1257 aaPredicted RBP10.17□□□□□ -0.78
RAF1-212ENST00000494557 NASPP49321 788 aaPredicted RBP10.17□□□□□ -0.78
RAF1-212ENST00000494557 MCMDC2Q4G0Z9 681 aa10.17□□□□□ -0.78
RAF1-212ENST00000494557 SPRYD3Q8NCJ5 442 aa10.17□□□□□ -0.78
RAF1-212ENST00000494557 MTA3Q9BTC8 594 aa10.17□□□□□ -0.78
RAF1-212ENST00000494557 NEDD4P46934 1319 aa10.17□□□□□ -0.78
RAF1-212ENST00000494557 PDS5AQ29RF7 1337 aaKnown RBP10.17□□□□□ -0.78
RAF1-212ENST00000494557 ESPNB1AK53 854 aa10.17□□□□□ -0.78
RAF1-212ENST00000494557 XPCQ01831 940 aaPredicted RBP10.17□□□□□ -0.78
RAF1-212ENST00000494557 TFCP2Q12800 502 aa10.17□□□□□ -0.78
RAF1-212ENST00000494557 COL9A3Q14050 684 aaPredicted RBP10.17□□□□□ -0.78
RAF1-212ENST00000494557 CCDC183Q5T5S1 534 aa10.17□□□□□ -0.78
RAF1-212ENST00000494557 NAA16Q6N069 864 aaPredicted RBP10.17□□□□□ -0.78
RAF1-212ENST00000494557 RIC3Q7Z5B4 369 aa10.17□□□□□ -0.78
RAF1-212ENST00000494557 ZBTB38Q8NAP3 1195 aaPredicted RBP10.17□□□□□ -0.78
RAF1-212ENST00000494557 KCND1Q9NSA2 647 aa10.17□□□□□ -0.78
RAF1-212ENST00000494557 DIAPH3Q9NSV4 1193 aa10.17□□□□□ -0.78
RAF1-212ENST00000494557 PDRG1Q9NUG6 133 aa10.17□□□□□ -0.78
RAF1-212ENST00000494557 USP25Q9UHP3 1055 aa10.17□□□□□ -0.78
RAF1-212ENST00000494557 FAM237AA0A1B0GTK4 181 aa10.16□□□□□ -0.78
RAF1-212ENST00000494557 PHF14O94880 888 aa10.16□□□□□ -0.78
RAF1-212ENST00000494557 RESTQ13127 1097 aa10.16□□□□□ -0.78
RAF1-212ENST00000494557 CWC27Q6UX04 472 aaKnown RBP10.16□□□□□ -0.78
RAF1-212ENST00000494557 USP48Q86UV5 1035 aa10.16□□□□□ -0.78
RAF1-212ENST00000494557 ZNF274Q96GC6 653 aaPredicted RBP10.16□□□□□ -0.78
RAF1-212ENST00000494557 RIPOR2Q9Y4F9 1068 aa10.16□□□□□ -0.78
RAF1-212ENST00000494557 C10orf71Q711Q0 1435 aa10.16□□□□□ -0.78
RAF1-212ENST00000494557 CASTP20810 708 aaKnown RBP10.16□□□□□ -0.78
RAF1-212ENST00000494557 CABP4P57796 275 aa10.16□□□□□ -0.78
RAF1-212ENST00000494557 RNF20Q5VTR2 975 aa10.16□□□□□ -0.78
RAF1-212ENST00000494557 ZSCAN30Q86W11 494 aa10.16□□□□□ -0.78
RAF1-212ENST00000494557 CDCA7Q9BWT1 371 aaPredicted RBP10.16□□□□□ -0.78
RAF1-212ENST00000494557 PSME4Q14997 1843 aa10.16□□□□□ -0.78
RAF1-212ENST00000494557 ZC3H6P61129 1189 aaKnown RBP10.16□□□□□ -0.78
RAF1-212ENST00000494557 ALX1Q15699 326 aa10.16□□□□□ -0.78
RAF1-212ENST00000494557 ZNF34Q8IZ26 560 aa10.16□□□□□ -0.78
RAF1-212ENST00000494557 CSPP1Q1MSJ5 1256 aa10.15□□□□□ -0.78
RAF1-212ENST00000494557 GIGYF2Q6Y7W6 1299 aaKnown RBP10.15□□□□□ -0.78
RAF1-212ENST00000494557 STOX1Q6ZVD7 989 aa10.15□□□□□ -0.78
RAF1-212ENST00000494557 TTC5Q8N0Z6 440 aa10.15□□□□□ -0.78
RAF1-212ENST00000494557 SYAP1Q96A49 352 aaPredicted RBP10.15□□□□□ -0.78
RAF1-212ENST00000494557 TAF6LQ9Y6J9 622 aa10.15□□□□□ -0.78
RAF1-212ENST00000494557 ZFYP08048 801 aaPredicted RBP10.15□□□□□ -0.78
RAF1-212ENST00000494557 CYP21A2P08686 494 aa10.15□□□□□ -0.78
RAF1-212ENST00000494557 CYP19A1P11511 503 aaPredicted RBP10.15□□□□□ -0.78
RAF1-212ENST00000494557 PDCP20941 246 aa10.15□□□□□ -0.78
RAF1-212ENST00000494557 SLC4A9Q96Q91 983 aa10.15□□□□□ -0.78
RAF1-212ENST00000494557 SPTLC3Q9NUV7 552 aa10.15□□□□□ -0.78
RAF1-212ENST00000494557 NLRP2Q9NX02 1062 aa10.15□□□□□ -0.78
RAF1-212ENST00000494557 TCRBV5S4A2TA0A5A2 114 aa10.14□□□□□ -0.79
RAF1-212ENST00000494557 ELOA2Q8IYF1 753 aaPredicted RBP10.14□□□□□ -0.79
RAF1-212ENST00000494557 PRPF40AO75400 957 aaKnown RBP10.14□□□□□ -0.79
RAF1-212ENST00000494557 CTDNEP1O95476 244 aa10.14□□□□□ -0.79
RAF1-212ENST00000494557 GJB2P29033 226 aa10.14□□□□□ -0.79
RAF1-212ENST00000494557 RCAN1P53805 252 aa10.14□□□□□ -0.79
RAF1-212ENST00000494557 UPF3BQ9BZI7 483 aaKnown RBP10.14□□□□□ -0.79
RAF1-212ENST00000494557 MAST3O60307 1309 aa10.14□□□□□ -0.79
RAF1-212ENST00000494557 OFD1O75665 1012 aa10.14□□□□□ -0.79
RAF1-212ENST00000494557 ZKSCAN1P17029 563 aaPredicted RBP10.14□□□□□ -0.79
RAF1-212ENST00000494557 PRPF40BQ6NWY9 871 aaKnown RBP10.14□□□□□ -0.79
RAF1-212ENST00000494557 BARGINQ6ZT62 677 aa10.14□□□□□ -0.79
RAF1-212ENST00000494557 DDX17Q92841 729 aaKnown RBP10.14□□□□□ -0.79
RAF1-212ENST00000494557 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.14□□□□□ -0.79
RAF1-212ENST00000494557 GADD45BO75293 160 aaPredicted RBP10.13□□□□□ -0.79
RAF1-212ENST00000494557 CAVIN1Q6NZI2 390 aaKnown RBP10.13□□□□□ -0.79
RAF1-212ENST00000494557 TTLL7Q6ZT98 887 aa10.13□□□□□ -0.79
RAF1-212ENST00000494557 KIAA1211Q6ZU35 1233 aa10.13□□□□□ -0.79
RAF1-212ENST00000494557 TAF1P21675 1872 aa10.13□□□□□ -0.79
RAF1-212ENST00000494557 A0A087WZG4 1122 aa10.13□□□□□ -0.79
RAF1-212ENST00000494557 IL6STP40189 918 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms