RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 RFX7Q2KHR2 1363 aa8.3□□□□□ -1.08
MSH5-217ENST00000494458 ANKRD18BA2A2Z9 1011 aa8.29□□□□□ -1.08
MSH5-217ENST00000494458 SGSM2O43147 1006 aa8.29□□□□□ -1.08
MSH5-217ENST00000494458 ATMINO43313 823 aaPredicted RBP8.29□□□□□ -1.08
MSH5-217ENST00000494458 FGFR2P21802 821 aa8.29□□□□□ -1.08
MSH5-217ENST00000494458 TM4SF1P30408 202 aa8.29□□□□□ -1.08
MSH5-217ENST00000494458 RTL5Q5HYW3 569 aaPredicted RBP8.29□□□□□ -1.08
MSH5-217ENST00000494458 TRAPPC3LQ5T215 181 aa8.29□□□□□ -1.08
MSH5-217ENST00000494458 TBC1D9BQ66K14 1250 aa8.29□□□□□ -1.08
MSH5-217ENST00000494458 CNTROBQ8N137 903 aa8.29□□□□□ -1.08
MSH5-217ENST00000494458 KCNB2Q92953 911 aa8.29□□□□□ -1.08
MSH5-217ENST00000494458 SNX21Q969T3 373 aa8.29□□□□□ -1.08
MSH5-217ENST00000494458 GPATCH3Q96I76 525 aa8.29□□□□□ -1.08
MSH5-217ENST00000494458 ZNF594Q96JF6 807 aaPredicted RBP8.29□□□□□ -1.08
MSH5-217ENST00000494458 HAUS7Q99871 368 aa8.29□□□□□ -1.08
MSH5-217ENST00000494458 CCDC8Q9H0W5 538 aaPredicted RBP8.29□□□□□ -1.08
MSH5-217ENST00000494458 TLR7Q9NYK1 1049 aaKnown RBP8.29□□□□□ -1.08
MSH5-217ENST00000494458 CEP126Q9P2H0 1117 aa8.29□□□□□ -1.08
MSH5-217ENST00000494458 ABCC12Q96J65 1359 aa8.29□□□□□ -1.08
MSH5-217ENST00000494458 LAMB2P55268 1798 aa8.29□□□□□ -1.08
MSH5-217ENST00000494458 DDX60Q8IY21 1712 aaKnown RBP8.29□□□□□ -1.08
MSH5-217ENST00000494458 ZNF609O15014 1411 aa8.29□□□□□ -1.08
MSH5-217ENST00000494458 KLRG2A4D1S0 409 aaPredicted RBP8.28□□□□□ -1.08
MSH5-217ENST00000494458 GNPATO15228 680 aa8.28□□□□□ -1.08
MSH5-217ENST00000494458 TRIM37O94972 964 aa8.28□□□□□ -1.08
MSH5-217ENST00000494458 REC8O95072 547 aa8.28□□□□□ -1.08
MSH5-217ENST00000494458 MFAP1P55081 439 aaKnown RBP8.28□□□□□ -1.08
MSH5-217ENST00000494458 TXNRD1Q16881 649 aa8.28□□□□□ -1.08
MSH5-217ENST00000494458 CCDC152Q4G0S7 254 aa8.28□□□□□ -1.08
MSH5-217ENST00000494458 USPL1Q5W0Q7 1092 aa8.28□□□□□ -1.08
MSH5-217ENST00000494458 POTEAQ6S8J7 498 aa8.28□□□□□ -1.08
MSH5-217ENST00000494458 CASC1Q6TDU7 716 aa8.28□□□□□ -1.08
MSH5-217ENST00000494458 SLC39A7Q92504 469 aa8.28□□□□□ -1.08
MSH5-217ENST00000494458 DBNDD2Q9BQY9 259 aa8.28□□□□□ -1.08
MSH5-217ENST00000494458 NYXQ9GZU5 481 aa8.28□□□□□ -1.08
MSH5-217ENST00000494458 AKAP2Q9Y2D5 859 aa8.28□□□□□ -1.08
MSH5-217ENST00000494458 MYH3P11055 1940 aa8.28□□□□□ -1.08
MSH5-217ENST00000494458 UBR3Q6ZT12 1888 aa8.28□□□□□ -1.08
MSH5-217ENST00000494458 A0A1B0GUL7 405 aa8.27□□□□□ -1.09
MSH5-217ENST00000494458 HIP1O00291 1037 aa8.27□□□□□ -1.09
MSH5-217ENST00000494458 ZPR1O75312 459 aa8.27□□□□□ -1.09
MSH5-217ENST00000494458 PDE8BO95263 885 aa8.27□□□□□ -1.09
MSH5-217ENST00000494458 HCLS1P14317 486 aaPredicted RBP8.27□□□□□ -1.09
MSH5-217ENST00000494458 MNX1P50219 401 aaPredicted RBP8.27□□□□□ -1.09
MSH5-217ENST00000494458 ANAPC15P60006 121 aa8.27□□□□□ -1.09
MSH5-217ENST00000494458 TIMM10P62072 90 aa8.27□□□□□ -1.09
MSH5-217ENST00000494458 LDHAL6AQ6ZMR3 332 aa8.27□□□□□ -1.09
MSH5-217ENST00000494458 MAMSTRQ6ZN01 415 aa8.27□□□□□ -1.09
MSH5-217ENST00000494458 ARXQ96QS3 562 aa8.27□□□□□ -1.09
MSH5-217ENST00000494458 SETDB2Q96T68 719 aa8.27□□□□□ -1.09
MSH5-217ENST00000494458 IL25Q9H293 177 aa8.27□□□□□ -1.09
MSH5-217ENST00000494458 SRP68Q9UHB9 627 aaKnown RBP8.27□□□□□ -1.09
MSH5-217ENST00000494458 RGPD3A6NKT7 1758 aaPredicted RBP8.27□□□□□ -1.09
MSH5-217ENST00000494458 RGPD4Q7Z3J3 1758 aa8.27□□□□□ -1.09
MSH5-217ENST00000494458 MROH5Q6ZUA9 1318 aa8.27□□□□□ -1.09
MSH5-217ENST00000494458 C4AP0C0L4 1744 aa8.26□□□□□ -1.09
MSH5-217ENST00000494458 GYS1P13807 737 aa8.26□□□□□ -1.09
MSH5-217ENST00000494458 ERFEQ4G0M1 354 aa8.26□□□□□ -1.09
MSH5-217ENST00000494458 TPTE2Q6XPS3 522 aa8.26□□□□□ -1.09
MSH5-217ENST00000494458 C3orf67Q6ZVT6 689 aa8.26□□□□□ -1.09
MSH5-217ENST00000494458 FAM163AQ96GL9 167 aaPredicted RBP8.26□□□□□ -1.09
MSH5-217ENST00000494458 LSG1Q9H089 658 aaKnown RBP8.26□□□□□ -1.09
MSH5-217ENST00000494458 BSDC1Q9NW68 430 aaPredicted RBP8.26□□□□□ -1.09
MSH5-217ENST00000494458 RAD50Q92878 1312 aa8.26□□□□□ -1.09
MSH5-217ENST00000494458 SPEF2Q9C093 1822 aa8.25□□□□□ -1.09
MSH5-217ENST00000494458 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.25□□□□□ -1.09
MSH5-217ENST00000494458 TRIM6-TRIM34B2RNG4 842 aa8.25□□□□□ -1.09
MSH5-217ENST00000494458 HSPA4P34932 840 aa8.25□□□□□ -1.09
MSH5-217ENST00000494458 RFC4P35249 363 aa8.25□□□□□ -1.09
MSH5-217ENST00000494458 NFIXQ14938 502 aa8.25□□□□□ -1.09
MSH5-217ENST00000494458 CRY2Q49AN0 593 aa8.25□□□□□ -1.09
MSH5-217ENST00000494458 SMIM5Q71RC9 77 aa8.25□□□□□ -1.09
MSH5-217ENST00000494458 KBTBD3Q8NAB2 608 aa8.25□□□□□ -1.09
MSH5-217ENST00000494458 RILPL2Q969X0 211 aa8.25□□□□□ -1.09
MSH5-217ENST00000494458 XAGE2Q96GT9 111 aa8.25□□□□□ -1.09
MSH5-217ENST00000494458 TBC1D2Q9BYX2 928 aa8.25□□□□□ -1.09
MSH5-217ENST00000494458 BOLA2Q9H3K6 86 aa8.25□□□□□ -1.09
MSH5-217ENST00000494458 SEC31BQ9NQW1 1179 aa8.25□□□□□ -1.09
MSH5-217ENST00000494458 CHMP3Q9Y3E7 222 aa8.25□□□□□ -1.09
MSH5-217ENST00000494458 CARMIL3Q8ND23 1372 aa8.24□□□□□ -1.09
MSH5-217ENST00000494458 MED23Q9ULK4 1368 aa8.24□□□□□ -1.09
MSH5-217ENST00000494458 EP400Q96L91 3159 aa8.24□□□□□ -1.09
MSH5-217ENST00000494458 ARID4AP29374 1257 aaPredicted RBP8.24□□□□□ -1.09
MSH5-217ENST00000494458 RABEP1Q15276 862 aa8.24□□□□□ -1.09
MSH5-217ENST00000494458 TSGA10IPQ3SY00 556 aa8.24□□□□□ -1.09
MSH5-217ENST00000494458 RUFY2Q8WXA3 655 aa8.24□□□□□ -1.09
MSH5-217ENST00000494458 LPIN2Q92539 896 aa8.24□□□□□ -1.09
MSH5-217ENST00000494458 MAP4K1Q92918 833 aa8.24□□□□□ -1.09
MSH5-217ENST00000494458 MS4A3Q96HJ5 214 aa8.24□□□□□ -1.09
MSH5-217ENST00000494458 CAMKK2Q96RR4 588 aa8.24□□□□□ -1.09
MSH5-217ENST00000494458 CDC5LQ99459 802 aaKnown RBP8.24□□□□□ -1.09
MSH5-217ENST00000494458 ADORA1P30542 326 aa8.23□□□□□ -1.09
MSH5-217ENST00000494458 HOXA10P31260 410 aaPredicted RBP8.23□□□□□ -1.09
MSH5-217ENST00000494458 DDIT3P35638 169 aa8.23□□□□□ -1.09
MSH5-217ENST00000494458 NECTIN1Q15223 517 aa8.23□□□□□ -1.09
MSH5-217ENST00000494458 PUM3Q15397 648 aaKnown RBP8.23□□□□□ -1.09
MSH5-217ENST00000494458 ATP2B3Q16720 1220 aa8.23□□□□□ -1.09
MSH5-217ENST00000494458 ZNF827Q17R98 1081 aa8.23□□□□□ -1.09
MSH5-217ENST00000494458 METTL24Q5JXM2 366 aa8.23□□□□□ -1.09
MSH5-217ENST00000494458 CCDC158Q5M9N0 1113 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms