RNA–Protein interactions for RNA: ENST00000493537.5

SUPT20H-221, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 2,149 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-221ENST00000493537 DDIT3P35638 169 aa5.33□□□□□ -1.56
SUPT20H-221ENST00000493537 SARSP49591 514 aaKnown RBP5.33□□□□□ -1.56
SUPT20H-221ENST00000493537 ZNF211Q13398 564 aaPredicted RBP5.33□□□□□ -1.56
SUPT20H-221ENST00000493537 SLMAPQ14BN4 828 aa5.33□□□□□ -1.56
SUPT20H-221ENST00000493537 MMS22LQ6ZRQ5 1243 aa5.33□□□□□ -1.56
SUPT20H-221ENST00000493537 ZNF354CQ86Y25 554 aa5.33□□□□□ -1.56
SUPT20H-221ENST00000493537 ZNF654Q8IZM8 581 aa5.33□□□□□ -1.56
SUPT20H-221ENST00000493537 ENAHQ8N8S7 591 aaPredicted RBP5.33□□□□□ -1.56
SUPT20H-221ENST00000493537 TTC8Q8TAM2 541 aa5.33□□□□□ -1.56
SUPT20H-221ENST00000493537 GIMAP1Q8WWP7 306 aa5.33□□□□□ -1.56
SUPT20H-221ENST00000493537 NELL1Q92832 810 aa5.33□□□□□ -1.56
SUPT20H-221ENST00000493537 SCLT1Q96NL6 688 aa5.33□□□□□ -1.56
SUPT20H-221ENST00000493537 VTI1BQ9UEU0 232 aa5.33□□□□□ -1.56
SUPT20H-221ENST00000493537 SPG7Q9UQ90 795 aa5.33□□□□□ -1.56
SUPT20H-221ENST00000493537 SMTNL1A8MU46 457 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 MAP3K7O43318 606 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 KIF22Q14807 665 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 PTPN14Q15678 1187 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 CTR9Q6PD62 1173 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 C16orf54Q6UWD8 224 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 TMC4Q7Z404 712 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 METTL3Q86U44 580 aaKnown RBP5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 JAMLQ86YT9 394 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 OR8H2Q8N162 312 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 C1orf216Q8TAB5 229 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 SH3TC2Q8TF17 1288 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 CSRNP2Q9H175 543 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 ANO2Q9NQ90 1003 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 CNTN3Q9P232 1028 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 SEL1LQ9UBV2 794 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 SHTN1A0MZ66 631 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 TPM3P06753 285 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 ZNF853P0CG23 659 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 FXR2P51116 673 aaKnown RBP eCLIP5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 DDX10Q13206 875 aaKnown RBP5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 BIRC3Q13489 604 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 ZNF449Q6P9G9 518 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 ARL10Q8N8L6 244 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 FLCNQ8NFG4 579 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 RMI1Q9H9A7 625 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 SIRPGQ9P1W8 387 aa5.32□□□□□ -1.56
SUPT20H-221ENST00000493537 SETD1BQ9UPS6 1966 aaKnown RBP5.31□□□□□ -1.56
SUPT20H-221ENST00000493537 KLHL33A6NCF5 533 aa5.31□□□□□ -1.56
SUPT20H-221ENST00000493537 FAM196BA6NMK8 535 aa5.31□□□□□ -1.56
SUPT20H-221ENST00000493537 FAM25EA8MYX2 175 aa5.31□□□□□ -1.56
SUPT20H-221ENST00000493537 PRR29P0C7W0 189 aa5.31□□□□□ -1.56
SUPT20H-221ENST00000493537 CCDC172P0C7W6 258 aa5.31□□□□□ -1.56
SUPT20H-221ENST00000493537 MSL3P1P0C860 447 aa5.31□□□□□ -1.56
SUPT20H-221ENST00000493537 EPB42P16452 691 aa5.31□□□□□ -1.56
SUPT20H-221ENST00000493537 ATF4P18848 351 aaPredicted RBP5.31□□□□□ -1.56
SUPT20H-221ENST00000493537 SMC1AQ14683 1233 aaKnown RBP5.31□□□□□ -1.56
SUPT20H-221ENST00000493537 HOMER1Q86YM7 354 aa5.31□□□□□ -1.56
SUPT20H-221ENST00000493537 TEX9Q8N6V9 391 aa5.31□□□□□ -1.56
SUPT20H-221ENST00000493537 NKAIN3Q8N8D7 197 aa5.31□□□□□ -1.56
SUPT20H-221ENST00000493537 FAM200AQ8TCP9 573 aa5.31□□□□□ -1.56
SUPT20H-221ENST00000493537 TRMT2BQ96GJ1 504 aaKnown RBP5.31□□□□□ -1.56
SUPT20H-221ENST00000493537 HERPUD2Q9BSE4 406 aa5.31□□□□□ -1.56
SUPT20H-221ENST00000493537 FAM167BQ9BTA0 163 aa5.31□□□□□ -1.56
SUPT20H-221ENST00000493537 ABCG4Q9H172 646 aa5.31□□□□□ -1.56
SUPT20H-221ENST00000493537 DIAPH3Q9NSV4 1193 aa5.31□□□□□ -1.56
SUPT20H-221ENST00000493537 HOXC10Q9NYD6 342 aa5.31□□□□□ -1.56
SUPT20H-221ENST00000493537 IL16Q14005 1332 aa5.31□□□□□ -1.56
SUPT20H-221ENST00000493537 KIF3CO14782 793 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 C21orf2O43822 256 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 SNX2O60749 519 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 GPR37L1O60883 481 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 GYS1P13807 737 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 SLC5A1P13866 664 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 RACK1P63244 317 aaKnown RBP5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 PTK7Q13308 1070 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 SEPT7Q16181 437 aaKnown RBP5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 KIAA1614Q5VZ46 1190 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 KRT26Q7Z3Y9 468 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 MAATS1Q7Z4T9 603 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 RIC3Q7Z5B4 369 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 ERCC4Q92889 916 aaPredicted RBP5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 TEKT1Q969V4 418 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 RABL2AQ9UBK7 228 aaPredicted RBP5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 SNX5Q9Y5X3 404 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 A6NCN8 305 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 ALG1L2C9J202 215 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 CCP110O43303 1012 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 VARSP26640 1264 aaKnown RBP5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 CNGA1P29973 690 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 STIP1P31948 543 aaKnown RBP5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 UBA7P41226 1012 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 HALP42357 657 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 SLC4A3P48751 1232 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 ZNF713Q8N859 430 aaPredicted RBP5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 SP7Q8TDD2 431 aaPredicted RBP5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 ZNF396Q96N95 335 aaPredicted RBP5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 DUSP9Q99956 384 aaKnown RBP5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 LZTS2Q9BRK4 669 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 GPHNQ9NQX3 736 aaPredicted RBP5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 EMILIN3Q9NT22 766 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 SNTG2Q9NY99 539 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 TPCN1Q9ULQ1 816 aa5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 RRP15Q9Y3B9 282 aaKnown RBP5.3□□□□□ -1.56
SUPT20H-221ENST00000493537 PCDHGB7Q9Y5F8 929 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms