RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 NEURL1BA8MQ27 555 aa18.32■□□□□ 0.52
CACUL1-206ENST00000493518 SKILP12757 684 aa18.32■□□□□ 0.52
CACUL1-206ENST00000493518 RXRAP19793 462 aa18.32■□□□□ 0.52
CACUL1-206ENST00000493518 GCKRQ14397 625 aa18.32■□□□□ 0.52
CACUL1-206ENST00000493518 ANKRD13DQ6ZTN6 518 aa18.32■□□□□ 0.52
CACUL1-206ENST00000493518 STOX1Q6ZVD7 989 aa18.32■□□□□ 0.52
CACUL1-206ENST00000493518 TTC5Q8N0Z6 440 aa18.32■□□□□ 0.52
CACUL1-206ENST00000493518 FAM177A1Q8N128 213 aaPredicted RBP18.32■□□□□ 0.52
CACUL1-206ENST00000493518 GTF3C6Q969F1 213 aa18.32■□□□□ 0.52
CACUL1-206ENST00000493518 GOLPH3LQ9H4A5 285 aa18.32■□□□□ 0.52
CACUL1-206ENST00000493518 TNNI3KQ59H18 835 aa18.31■□□□□ 0.52
CACUL1-206ENST00000493518 FPGT-TNNI3KV9GXZ4 949 aa18.31■□□□□ 0.52
CACUL1-206ENST00000493518 DDX21Q9NR30 783 aaKnown RBP eCLIP18.31■□□□□ 0.52
CACUL1-206ENST00000493518 ZSCAN20P17040 1043 aaPredicted RBP18.3■□□□□ 0.52
CACUL1-206ENST00000493518 ZBTB3Q9H5J0 574 aa18.3■□□□□ 0.52
CACUL1-206ENST00000493518 PLEKHG1Q9ULL1 1385 aa18.3■□□□□ 0.52
CACUL1-206ENST00000493518 NCBP1Q09161 790 aaKnown RBP18.3■□□□□ 0.52
CACUL1-206ENST00000493518 ZNF790Q6PG37 636 aa18.3■□□□□ 0.52
CACUL1-206ENST00000493518 SMAP1Q8IYB5 467 aaPredicted RBP18.3■□□□□ 0.52
CACUL1-206ENST00000493518 COL15A1P39059 1388 aa18.29■□□□□ 0.52
CACUL1-206ENST00000493518 RGPD8O14715 1765 aaPredicted RBP18.29■□□□□ 0.52
CACUL1-206ENST00000493518 CCDC69A6NI79 296 aa18.29■□□□□ 0.52
CACUL1-206ENST00000493518 CEP135Q66GS9 1140 aa18.29■□□□□ 0.52
CACUL1-206ENST00000493518 SETD1AO15047 1707 aaKnown RBP18.28■□□□□ 0.52
CACUL1-206ENST00000493518 RESTQ13127 1097 aa18.28■□□□□ 0.52
CACUL1-206ENST00000493518 MTX1Q13505 466 aa18.28■□□□□ 0.52
CACUL1-206ENST00000493518 MARCKSP29966 332 aaPredicted RBP18.28■□□□□ 0.52
CACUL1-206ENST00000493518 MCMDC2Q4G0Z9 681 aa18.28■□□□□ 0.52
CACUL1-206ENST00000493518 CFAP45Q9UL16 551 aa18.28■□□□□ 0.52
CACUL1-206ENST00000493518 GOLGA8FQ08AF8 430 aa18.27■□□□□ 0.52
CACUL1-206ENST00000493518 GOLGA8DPQ0D2H9 430 aa18.27■□□□□ 0.52
CACUL1-206ENST00000493518 ZNF215Q9UL58 517 aaPredicted RBP18.27■□□□□ 0.52
CACUL1-206ENST00000493518 HDAC5Q9UQL6 1122 aa18.27■□□□□ 0.52
CACUL1-206ENST00000493518 CEMIPQ8WUJ3 1361 aa18.27■□□□□ 0.52
CACUL1-206ENST00000493518 PTPN12Q05209 780 aaKnown RBP18.27■□□□□ 0.52
CACUL1-206ENST00000493518 PTPN14Q15678 1187 aa18.27■□□□□ 0.52
CACUL1-206ENST00000493518 AKAP12Q02952 1782 aa18.27■□□□□ 0.52
CACUL1-206ENST00000493518 EPB41L2O43491 1005 aaKnown RBP18.27■□□□□ 0.51
CACUL1-206ENST00000493518 TPM3P06753 285 aa18.27■□□□□ 0.51
CACUL1-206ENST00000493518 PDIA6Q15084 440 aa18.27■□□□□ 0.51
CACUL1-206ENST00000493518 PXDNQ92626 1479 aa18.26■□□□□ 0.51
CACUL1-206ENST00000493518 A0A0G2JS52 829 aa18.26■□□□□ 0.51
CACUL1-206ENST00000493518 ERICH4A6NGS2 130 aa18.26■□□□□ 0.51
CACUL1-206ENST00000493518 STK38Q15208 465 aa18.26■□□□□ 0.51
CACUL1-206ENST00000493518 AMOTQ4VCS5 1084 aa18.26■□□□□ 0.51
CACUL1-206ENST00000493518 BABAM1Q9NWV8 329 aa18.26■□□□□ 0.51
CACUL1-206ENST00000493518 LMOD1P29536 600 aaPredicted RBP18.25■□□□□ 0.51
CACUL1-206ENST00000493518 LRRC24Q50LG9 513 aa18.25■□□□□ 0.51
CACUL1-206ENST00000493518 USP42Q9H9J4 1324 aaKnown RBP18.25■□□□□ 0.51
CACUL1-206ENST00000493518 MAPK8IP2Q13387 824 aaPredicted RBP18.25■□□□□ 0.51
CACUL1-206ENST00000493518 PI16Q6UXB8 463 aa18.25■□□□□ 0.51
CACUL1-206ENST00000493518 TMC6Q7Z403 805 aa18.25■□□□□ 0.51
CACUL1-206ENST00000493518 IL17RAQ96F46 866 aa18.25■□□□□ 0.51
CACUL1-206ENST00000493518 ELF2Q15723 593 aa18.25■□□□□ 0.51
CACUL1-206ENST00000493518 HOMER1Q86YM7 354 aa18.25■□□□□ 0.51
CACUL1-206ENST00000493518 LRRC8AQ8IWT6 810 aa18.25■□□□□ 0.51
CACUL1-206ENST00000493518 NSUN7Q8NE18 718 aaKnown RBP18.25■□□□□ 0.51
CACUL1-206ENST00000493518 HOXB7P09629 217 aa18.24■□□□□ 0.51
CACUL1-206ENST00000493518 ATP2B1P20020 1258 aa18.24■□□□□ 0.51
CACUL1-206ENST00000493518 CCDC82Q8N4S0 544 aa18.24■□□□□ 0.51
CACUL1-206ENST00000493518 CHMP4AQ9BY43 222 aa18.24■□□□□ 0.51
CACUL1-206ENST00000493518 PUS3Q9BZE2 481 aaKnown RBP18.24■□□□□ 0.51
CACUL1-206ENST00000493518 ST7Q9NRC1 585 aa18.24■□□□□ 0.51
CACUL1-206ENST00000493518 APPP05067 770 aa18.24■□□□□ 0.51
CACUL1-206ENST00000493518 KRT32Q14532 448 aa18.24■□□□□ 0.51
CACUL1-206ENST00000493518 PLA2G4DQ86XP0 818 aa18.24■□□□□ 0.51
CACUL1-206ENST00000493518 KCNH5Q8NCM2 988 aa18.24■□□□□ 0.51
CACUL1-206ENST00000493518 NPHP4O75161 1426 aaPredicted RBP18.23■□□□□ 0.51
CACUL1-206ENST00000493518 XRN1Q8IZH2 1706 aaKnown RBP18.23■□□□□ 0.51
CACUL1-206ENST00000493518 CPLX1O14810 134 aa18.23■□□□□ 0.51
CACUL1-206ENST00000493518 CTDNEP1O95476 244 aa18.23■□□□□ 0.51
CACUL1-206ENST00000493518 HMG20BQ9P0W2 317 aa18.23■□□□□ 0.51
CACUL1-206ENST00000493518 U3KPZ7 1027 aaPredicted RBP18.23■□□□□ 0.51
CACUL1-206ENST00000493518 TDRD7Q8NHU6 1098 aaKnown RBP18.23■□□□□ 0.51
CACUL1-206ENST00000493518 AIFM3Q96NN9 605 aa18.23■□□□□ 0.51
CACUL1-206ENST00000493518 ELP1O95163 1332 aa18.23■□□□□ 0.51
CACUL1-206ENST00000493518 IFIT1P09914 478 aaKnown RBP18.23■□□□□ 0.51
CACUL1-206ENST00000493518 GNL2Q13823 731 aaKnown RBP18.23■□□□□ 0.51
CACUL1-206ENST00000493518 STX1AQ16623 288 aa18.23■□□□□ 0.51
CACUL1-206ENST00000493518 DPCR1Q3MIW9 517 aa18.23■□□□□ 0.51
CACUL1-206ENST00000493518 DHX32Q7L7V1 743 aaKnown RBP18.23■□□□□ 0.51
CACUL1-206ENST00000493518 METTL22Q9BUU2 404 aaPredicted RBP18.23■□□□□ 0.51
CACUL1-206ENST00000493518 IFNKQ9P0W0 207 aa18.23■□□□□ 0.51
CACUL1-206ENST00000493518 CLIC4Q9Y696 253 aa18.23■□□□□ 0.51
CACUL1-206ENST00000493518 ZNF609O15014 1411 aa18.22■□□□□ 0.51
CACUL1-206ENST00000493518 GTF2F1P35269 517 aaKnown RBP eCLIP18.22■□□□□ 0.51
CACUL1-206ENST00000493518 DMTNQ08495 405 aa18.22■□□□□ 0.51
CACUL1-206ENST00000493518 TTLL7Q6ZT98 887 aa18.22■□□□□ 0.51
CACUL1-206ENST00000493518 TRERF1Q96PN7 1200 aa18.22■□□□□ 0.51
CACUL1-206ENST00000493518 PAG1Q9NWQ8 432 aa18.22■□□□□ 0.51
CACUL1-206ENST00000493518 DIP2BQ9P265 1576 aa18.22■□□□□ 0.51
CACUL1-206ENST00000493518 NDUFA8P51970 172 aa18.22■□□□□ 0.51
CACUL1-206ENST00000493518 DENND2AQ9ULE3 1009 aa18.22■□□□□ 0.51
CACUL1-206ENST00000493518 TRHP20396 242 aaPredicted RBP18.21■□□□□ 0.51
CACUL1-206ENST00000493518 CEP57L1Q8IYX8 460 aa18.21■□□□□ 0.51
CACUL1-206ENST00000493518 SMTNL1A8MU46 457 aa18.21■□□□□ 0.51
CACUL1-206ENST00000493518 E7EWF7 191 aa18.21■□□□□ 0.51
CACUL1-206ENST00000493518 A1BGP04217 495 aa18.21■□□□□ 0.51
CACUL1-206ENST00000493518 ATP5JP18859 108 aa18.21■□□□□ 0.51
CACUL1-206ENST00000493518 SPECC1Q5M775 1068 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms