RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 EP400NLQ6ZTU2 488 aa5.05□□□□□ -1.6
BRCA1-220ENST00000492859 OTUD6AQ7L8S5 288 aa5.05□□□□□ -1.6
BRCA1-220ENST00000492859 SAMD14Q8IZD0 417 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-220ENST00000492859 PRR7Q8TB68 274 aa5.05□□□□□ -1.6
BRCA1-220ENST00000492859 MPP4Q96JB8 637 aa5.05□□□□□ -1.6
BRCA1-220ENST00000492859 NELL2Q99435 816 aa5.05□□□□□ -1.6
BRCA1-220ENST00000492859 MAP3K14Q99558 947 aa5.05□□□□□ -1.6
BRCA1-220ENST00000492859 PCGF6Q9BYE7 350 aa5.05□□□□□ -1.6
BRCA1-220ENST00000492859 PDCL3Q9H2J4 239 aa5.05□□□□□ -1.6
BRCA1-220ENST00000492859 TMX1Q9H3N1 280 aa5.05□□□□□ -1.6
BRCA1-220ENST00000492859 METTL5Q9NRN9 209 aaKnown RBP5.05□□□□□ -1.6
BRCA1-220ENST00000492859 CGNQ9P2M7 1197 aaKnown RBP5.05□□□□□ -1.6
BRCA1-220ENST00000492859 NOVA2Q9UNW9 492 aaKnown RBP5.05□□□□□ -1.6
BRCA1-220ENST00000492859 LOC100996750A0A140TA64 210 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 C19orf81C9J6K1 198 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 NR1I2O75469 434 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 TCEA3O75764 348 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 FGRP09769 529 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 SKILP12757 684 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 HYIQ5T013 277 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 KSR2Q6VAB6 950 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 SNX32Q86XE0 403 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 JAMLQ86YT9 394 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 BRSK2Q8IWQ3 736 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 SPICE1Q8N0Z3 855 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 ARL6IP6Q8N6S5 226 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 MIGA1Q8NAN2 632 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 PPHLN1Q8NEY8 458 aaKnown RBP5.04□□□□□ -1.6
BRCA1-220ENST00000492859 ZFPM2Q8WW38 1151 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 PGBD4Q96DM1 585 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 CDCA7LQ96GN5 454 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 ZFRQ96KR1 1074 aaKnown RBP5.04□□□□□ -1.6
BRCA1-220ENST00000492859 GPR101Q96P66 508 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-220ENST00000492859 KRTAP4-6Q9BYQ5 205 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.04□□□□□ -1.6
BRCA1-220ENST00000492859 SLKQ9H2G2 1235 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-220ENST00000492859 DHX36Q9H2U1 1008 aaKnown RBP5.04□□□□□ -1.6
BRCA1-220ENST00000492859 KANSL2Q9H9L4 492 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 NGRNQ9NPE2 291 aaKnown RBP5.04□□□□□ -1.6
BRCA1-220ENST00000492859 DCAF16Q9NXF7 216 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 UTP6Q9NYH9 597 aaKnown RBP5.04□□□□□ -1.6
BRCA1-220ENST00000492859 PLA2G2EQ9NZK7 142 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 RBM19Q9Y4C8 960 aaKnown RBP5.04□□□□□ -1.6
BRCA1-220ENST00000492859 GTPBP10A4D1E9 387 aaKnown RBP5.04□□□□□ -1.6
BRCA1-220ENST00000492859 GOLGA8CPA6NN73 597 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 TMEM110-MUSTN1A8MSY1 372 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 BAIAP3O94812 1187 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 CCDC175P0C221 793 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 NCAM1P13591 858 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 HCLS1P14317 486 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-220ENST00000492859 CLCN1P35523 988 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 MASP1P48740 699 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 FAM69CQ0P6D2 419 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 MORC3Q14149 939 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 FAM133BQ5BKY9 247 aaKnown RBP5.04□□□□□ -1.6
BRCA1-220ENST00000492859 WDR45BQ5MNZ6 344 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 C11orf74Q86VG3 221 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 FAM43AQ8N2R8 423 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 CERKQ8TCT0 537 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 SKA1Q96BD8 255 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 TBC1D31Q96DN5 1066 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 AGAP3Q96P47 875 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 CENPOQ9BU64 300 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 ANO2Q9NQ90 1003 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 FANCLQ9NW38 375 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 COMMD8Q9NX08 183 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 CNTN3Q9P232 1028 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 LIMD1Q9UGP4 676 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 PGAP2Q9UHJ9 254 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 XPO7Q9UIA9 1087 aaKnown RBP5.04□□□□□ -1.6
BRCA1-220ENST00000492859 INPP5FQ9Y2H2 1132 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 IKBKGQ9Y6K9 419 aa5.04□□□□□ -1.6
BRCA1-220ENST00000492859 ALDH1L1O75891 902 aa5.03□□□□□ -1.6
BRCA1-220ENST00000492859 TRIM37O94972 964 aa5.03□□□□□ -1.6
BRCA1-220ENST00000492859 ECEL1O95672 775 aa5.03□□□□□ -1.6
BRCA1-220ENST00000492859 SCGB1D2O95969 90 aa5.03□□□□□ -1.6
BRCA1-220ENST00000492859 P4HBP07237 508 aaKnown RBP5.03□□□□□ -1.6
BRCA1-220ENST00000492859 CCDC159P0C7I6 412 aa5.03□□□□□ -1.6
BRCA1-220ENST00000492859 ATF3P18847 181 aa5.03□□□□□ -1.6
BRCA1-220ENST00000492859 ZNF76P36508 570 aa5.03□□□□□ -1.6
BRCA1-220ENST00000492859 PRSS12P56730 875 aa5.03□□□□□ -1.6
BRCA1-220ENST00000492859 INHBEP58166 350 aa5.03□□□□□ -1.6
BRCA1-220ENST00000492859 TRIM29Q14134 588 aa5.03□□□□□ -1.6
BRCA1-220ENST00000492859 TTF1Q15361 905 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-220ENST00000492859 CCDC158Q5M9N0 1113 aa5.03□□□□□ -1.6
BRCA1-220ENST00000492859 KIAA1614Q5VZ46 1190 aa5.03□□□□□ -1.6
BRCA1-220ENST00000492859 TSHZ3Q63HK5 1081 aa5.03□□□□□ -1.6
BRCA1-220ENST00000492859 CFAP161Q6P656 301 aa5.03□□□□□ -1.6
BRCA1-220ENST00000492859 NFXL1Q6ZNB6 911 aa5.03□□□□□ -1.6
BRCA1-220ENST00000492859 GIMAP1Q8WWP7 306 aa5.03□□□□□ -1.6
BRCA1-220ENST00000492859 GJD4Q96KN9 370 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-220ENST00000492859 SELENOOQ9BVL4 669 aa5.03□□□□□ -1.6
BRCA1-220ENST00000492859 FAM126AQ9BYI3 521 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-220ENST00000492859 RMI1Q9H9A7 625 aa5.03□□□□□ -1.6
BRCA1-220ENST00000492859 GPCPD1Q9NPB8 672 aa5.03□□□□□ -1.6
BRCA1-220ENST00000492859 GINM1Q9NU53 330 aa5.03□□□□□ -1.6
BRCA1-220ENST00000492859 RNF19AQ9NV58 838 aa5.03□□□□□ -1.6
BRCA1-220ENST00000492859 HOXC10Q9NYD6 342 aa5.03□□□□□ -1.6
BRCA1-220ENST00000492859 C9orf78Q9NZ63 289 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-220ENST00000492859 USP25Q9UHP3 1055 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms