RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 ABCC4O15439 1325 aa7.35□□□□□ -1.23
SEC13-219ENST00000492602 RIMBP2O15034 1052 aa7.35□□□□□ -1.23
SEC13-219ENST00000492602 RGL2O15211 777 aa7.35□□□□□ -1.23
SEC13-219ENST00000492602 NF2P35240 595 aa7.35□□□□□ -1.23
SEC13-219ENST00000492602 BCAMP50895 628 aa7.35□□□□□ -1.23
SEC13-219ENST00000492602 TEFQ10587 303 aa7.35□□□□□ -1.23
SEC13-219ENST00000492602 MTFR1Q15390 333 aa7.35□□□□□ -1.23
SEC13-219ENST00000492602 WASHC4Q2M389 1173 aa7.35□□□□□ -1.23
SEC13-219ENST00000492602 LRIT3Q3SXY7 679 aa7.35□□□□□ -1.23
SEC13-219ENST00000492602 SP8Q8IXZ3 490 aa7.35□□□□□ -1.23
SEC13-219ENST00000492602 NKX2-3Q8TAU0 364 aa7.35□□□□□ -1.23
SEC13-219ENST00000492602 SNX27Q96L92 541 aa7.35□□□□□ -1.23
SEC13-219ENST00000492602 LAMB4A4D0S4 1761 aa7.34□□□□□ -1.23
SEC13-219ENST00000492602 TTC28Q96AY4 2481 aa7.34□□□□□ -1.23
SEC13-219ENST00000492602 BBOX1O75936 387 aa7.34□□□□□ -1.23
SEC13-219ENST00000492602 MTHFSDQ2M296 383 aaKnown RBP7.34□□□□□ -1.23
SEC13-219ENST00000492602 OTUD7BQ6GQQ9 843 aa7.34□□□□□ -1.23
SEC13-219ENST00000492602 ARMC9Q7Z3E5 817 aa7.34□□□□□ -1.23
SEC13-219ENST00000492602 UBE2Q1Q7Z7E8 422 aa7.34□□□□□ -1.23
SEC13-219ENST00000492602 NLRP3Q96P20 1036 aa7.34□□□□□ -1.23
SEC13-219ENST00000492602 RTL9Q8NET4 1388 aa7.33□□□□□ -1.24
SEC13-219ENST00000492602 IRS2Q9Y4H2 1338 aa7.33□□□□□ -1.24
SEC13-219ENST00000492602 TNFRSF10AO00220 468 aa7.33□□□□□ -1.24
SEC13-219ENST00000492602 KCNQ3O43525 872 aa7.33□□□□□ -1.24
SEC13-219ENST00000492602 ECE2O60344 883 aa7.33□□□□□ -1.24
SEC13-219ENST00000492602 NPM3O75607 178 aaKnown RBP7.33□□□□□ -1.24
SEC13-219ENST00000492602 ECM2O94769 699 aaPredicted RBP7.33□□□□□ -1.24
SEC13-219ENST00000492602 GPTP24298 496 aa7.33□□□□□ -1.24
SEC13-219ENST00000492602 BMP8BP34820 402 aa7.33□□□□□ -1.24
SEC13-219ENST00000492602 MAP3K12Q12852 859 aa7.33□□□□□ -1.24
SEC13-219ENST00000492602 DOK7Q18PE1 504 aa7.33□□□□□ -1.24
SEC13-219ENST00000492602 SUSD4Q5VX71 490 aa7.33□□□□□ -1.24
SEC13-219ENST00000492602 SLC10A4Q96EP9 437 aa7.33□□□□□ -1.24
SEC13-219ENST00000492602 FAM161BQ96MY7 647 aa7.33□□□□□ -1.24
SEC13-219ENST00000492602 GUCD1Q96NT3 240 aa7.33□□□□□ -1.24
SEC13-219ENST00000492602 GDF15Q99988 308 aa7.33□□□□□ -1.24
SEC13-219ENST00000492602 ANGEL1Q9UNK9 670 aaKnown RBP7.33□□□□□ -1.24
SEC13-219ENST00000492602 NBPF26B4DH59 902 aa7.32□□□□□ -1.24
SEC13-219ENST00000492602 FARP2O94887 1054 aaPredicted RBP7.32□□□□□ -1.24
SEC13-219ENST00000492602 VIL1P09327 827 aaKnown RBP7.32□□□□□ -1.24
SEC13-219ENST00000492602 HMOX1P09601 288 aa7.32□□□□□ -1.24
SEC13-219ENST00000492602 ZBTB48P10074 688 aaPredicted RBP7.32□□□□□ -1.24
SEC13-219ENST00000492602 GJA8P48165 433 aa7.32□□□□□ -1.24
SEC13-219ENST00000492602 ZNF280AP59817 542 aaPredicted RBP7.32□□□□□ -1.24
SEC13-219ENST00000492602 NBPF10Q6P3W6 841 aaKnown RBP7.32□□□□□ -1.24
SEC13-219ENST00000492602 TDHQ8IZJ6 230 aa7.32□□□□□ -1.24
SEC13-219ENST00000492602 NGEFQ8N5V2 710 aa7.32□□□□□ -1.24
SEC13-219ENST00000492602 MYOZ2Q9NPC6 264 aa7.32□□□□□ -1.24
SEC13-219ENST00000492602 FZD1Q9UP38 647 aa7.32□□□□□ -1.24
SEC13-219ENST00000492602 UBN2Q6ZU65 1347 aa7.31□□□□□ -1.24
SEC13-219ENST00000492602 BTBD11A6QL63 1104 aa7.31□□□□□ -1.24
SEC13-219ENST00000492602 C6orf229H3BNL8 230 aa7.31□□□□□ -1.24
SEC13-219ENST00000492602 GJB1P08034 283 aa7.31□□□□□ -1.24
SEC13-219ENST00000492602 IL13P35225 146 aa7.31□□□□□ -1.24
SEC13-219ENST00000492602 CDCA8Q53HL2 280 aa7.31□□□□□ -1.24
SEC13-219ENST00000492602 LDLRAD1Q5T700 205 aa7.31□□□□□ -1.24
SEC13-219ENST00000492602 IL17REQ8NFR9 667 aa7.31□□□□□ -1.24
SEC13-219ENST00000492602 WNK4Q96J92 1243 aa7.31□□□□□ -1.24
SEC13-219ENST00000492602 NSFL1CQ9UNZ2 370 aaKnown RBP7.31□□□□□ -1.24
SEC13-219ENST00000492602 KDM3BQ7LBC6 1761 aa7.31□□□□□ -1.24
SEC13-219ENST00000492602 EYSQ5T1H1 3165 aa7.3□□□□□ -1.24
SEC13-219ENST00000492602 NTSR2O95665 410 aa7.3□□□□□ -1.24
SEC13-219ENST00000492602 SNRPA1P09661 255 aaKnown RBP7.3□□□□□ -1.24
SEC13-219ENST00000492602 USP17L8P0C7I0 530 aa7.3□□□□□ -1.24
SEC13-219ENST00000492602 NBPF9Q3BBW0 867 aa7.3□□□□□ -1.24
SEC13-219ENST00000492602 DDX46Q7L014 1031 aaKnown RBP7.3□□□□□ -1.24
SEC13-219ENST00000492602 MAFAQ8NHW3 353 aaPredicted RBP7.3□□□□□ -1.24
SEC13-219ENST00000492602 PTPN18Q99952 460 aa7.3□□□□□ -1.24
SEC13-219ENST00000492602 RNF208Q9H0X6 261 aa7.3□□□□□ -1.24
SEC13-219ENST00000492602 ZMYND8Q9ULU4 1186 aaPredicted RBP7.3□□□□□ -1.24
SEC13-219ENST00000492602 ERVV-1B6SEH8 477 aa7.29□□□□□ -1.24
SEC13-219ENST00000492602 G3V3G9 751 aa7.29□□□□□ -1.24
SEC13-219ENST00000492602 POTEB2H3BUK9 544 aa7.29□□□□□ -1.24
SEC13-219ENST00000492602 CCL5P13501 91 aa7.29□□□□□ -1.24
SEC13-219ENST00000492602 GRAPQ13588 217 aa7.29□□□□□ -1.24
SEC13-219ENST00000492602 KIF22Q14807 665 aa7.29□□□□□ -1.24
SEC13-219ENST00000492602 DCAF8Q5TAQ9 597 aa7.29□□□□□ -1.24
SEC13-219ENST00000492602 RSBN1LQ6PCB5 846 aaPredicted RBP7.29□□□□□ -1.24
SEC13-219ENST00000492602 PPP1R42Q7Z4L9 355 aa7.29□□□□□ -1.24
SEC13-219ENST00000492602 AGBL3Q8NEM8 1001 aa7.29□□□□□ -1.24
SEC13-219ENST00000492602 GRAPLQ8TC17 118 aaPredicted RBP7.29□□□□□ -1.24
SEC13-219ENST00000492602 U2AF1L4Q8WU68 220 aaKnown RBP7.29□□□□□ -1.24
SEC13-219ENST00000492602 NECTIN2Q92692 538 aa7.29□□□□□ -1.24
SEC13-219ENST00000492602 CLMNQ96JQ2 1002 aa7.29□□□□□ -1.24
SEC13-219ENST00000492602 EYA3Q99504 573 aa7.29□□□□□ -1.24
SEC13-219ENST00000492602 UBE2OQ9C0C9 1292 aaKnown RBP7.29□□□□□ -1.24
SEC13-219ENST00000492602 ARHGAP39Q9C0H5 1083 aa7.29□□□□□ -1.24
SEC13-219ENST00000492602 ZFYVE28Q9HCC9 887 aa7.29□□□□□ -1.24
SEC13-219ENST00000492602 IBTKQ9P2D0 1353 aaPredicted RBP7.29□□□□□ -1.24
SEC13-219ENST00000492602 DUOX1Q9NRD9 1551 aa7.29□□□□□ -1.24
SEC13-219ENST00000492602 GNAT3A8MTJ3 354 aa7.28□□□□□ -1.24
SEC13-219ENST00000492602 SYN1P17600 705 aa7.28□□□□□ -1.24
SEC13-219ENST00000492602 MAGEA10P43363 369 aaPredicted RBP7.28□□□□□ -1.24
SEC13-219ENST00000492602 TAF1CQ15572 869 aaPredicted RBP7.28□□□□□ -1.24
SEC13-219ENST00000492602 TJAP1Q5JTD0 557 aa7.28□□□□□ -1.24
SEC13-219ENST00000492602 FAM109BQ6ICB4 259 aaPredicted RBP7.28□□□□□ -1.24
SEC13-219ENST00000492602 KIF6Q6ZMV9 814 aa7.28□□□□□ -1.24
SEC13-219ENST00000492602 C7orf61Q8IZ16 206 aa7.28□□□□□ -1.24
SEC13-219ENST00000492602 ZC3H12CQ9C0D7 883 aaKnown RBP7.28□□□□□ -1.24
SEC13-219ENST00000492602 ZBTB3Q9H5J0 574 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms