RNA–Protein interactions for RNA: ENST00000492468.5

PABPC4-216, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 2,257 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-216ENST00000492468 NAT10Q9H0A0 1025 aaKnown RBP17.3■□□□□ 0.36
PABPC4-216ENST00000492468 DIP2AQ14689 1571 aa17.3■□□□□ 0.36
PABPC4-216ENST00000492468 EIF2S2P20042 333 aaKnown RBP17.3■□□□□ 0.36
PABPC4-216ENST00000492468 EIF4A1P60842 406 aaKnown RBP17.3■□□□□ 0.36
PABPC4-216ENST00000492468 CEBPZQ03701 1054 aaKnown RBP17.3■□□□□ 0.36
PABPC4-216ENST00000492468 FTOQ9C0B1 505 aaKnown RBP eCLIP17.3■□□□□ 0.36
PABPC4-216ENST00000492468 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.3■□□□□ 0.36
PABPC4-216ENST00000492468 PHLPP2Q6ZVD8 1323 aa17.29■□□□□ 0.36
PABPC4-216ENST00000492468 TAF5LO75529 589 aa17.29■□□□□ 0.36
PABPC4-216ENST00000492468 SASH1O94885 1247 aa17.29■□□□□ 0.36
PABPC4-216ENST00000492468 ORC3Q9UBD5 711 aaPredicted RBP17.29■□□□□ 0.36
PABPC4-216ENST00000492468 LAMA4Q16363 1823 aa17.29■□□□□ 0.36
PABPC4-216ENST00000492468 MARF1Q9Y4F3 1742 aaKnown RBP17.29■□□□□ 0.36
PABPC4-216ENST00000492468 MRC1P22897 1456 aa17.29■□□□□ 0.36
PABPC4-216ENST00000492468 NUTM2FA1L443 756 aa17.28■□□□□ 0.36
PABPC4-216ENST00000492468 DHX8Q14562 1220 aaKnown RBP17.28■□□□□ 0.36
PABPC4-216ENST00000492468 NUTM2GQ5VZR2 741 aa17.28■□□□□ 0.36
PABPC4-216ENST00000492468 ATL3Q6DD88 541 aa17.28■□□□□ 0.36
PABPC4-216ENST00000492468 USP28Q96RU2 1077 aa17.28■□□□□ 0.36
PABPC4-216ENST00000492468 BPIFA3Q9BQP9 254 aa17.28■□□□□ 0.36
PABPC4-216ENST00000492468 LLPHQ9BRT6 129 aaKnown RBP17.28■□□□□ 0.36
PABPC4-216ENST00000492468 UBXN6Q9BZV1 441 aa17.28■□□□□ 0.36
PABPC4-216ENST00000492468 COL15A1P39059 1388 aa17.28■□□□□ 0.36
PABPC4-216ENST00000492468 ALDH1L1O75891 902 aa17.28■□□□□ 0.36
PABPC4-216ENST00000492468 NEK1Q96PY6 1258 aa17.28■□□□□ 0.36
PABPC4-216ENST00000492468 TLR7Q9NYK1 1049 aaKnown RBP17.28■□□□□ 0.36
PABPC4-216ENST00000492468 NCAPD2Q15021 1401 aa17.27■□□□□ 0.36
PABPC4-216ENST00000492468 SFPQP23246 707 aaKnown RBP eCLIP17.27■□□□□ 0.36
PABPC4-216ENST00000492468 SCRN1Q12765 414 aa17.27■□□□□ 0.36
PABPC4-216ENST00000492468 Q6ZUG5 572 aa17.27■□□□□ 0.36
PABPC4-216ENST00000492468 FSIP1Q8NA03 581 aa17.27■□□□□ 0.36
PABPC4-216ENST00000492468 XPO4Q9C0E2 1151 aaKnown RBP17.27■□□□□ 0.36
PABPC4-216ENST00000492468 ARGLU1Q9NWB6 273 aaPredicted RBP17.27■□□□□ 0.36
PABPC4-216ENST00000492468 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.27■□□□□ 0.35
PABPC4-216ENST00000492468 TMCO3Q6UWJ1 677 aa17.27■□□□□ 0.35
PABPC4-216ENST00000492468 TMC6Q7Z403 805 aa17.27■□□□□ 0.35
PABPC4-216ENST00000492468 NSUN7Q8NE18 718 aaKnown RBP17.27■□□□□ 0.35
PABPC4-216ENST00000492468 CCDC8Q9H0W5 538 aaPredicted RBP17.27■□□□□ 0.35
PABPC4-216ENST00000492468 SLIT1O75093 1534 aa17.27■□□□□ 0.35
PABPC4-216ENST00000492468 ETF1P62495 437 aaKnown RBP17.26■□□□□ 0.35
PABPC4-216ENST00000492468 TPM4P67936 248 aa17.26■□□□□ 0.35
PABPC4-216ENST00000492468 MUM1L1Q5H9M0 696 aa17.26■□□□□ 0.35
PABPC4-216ENST00000492468 FMR1NBQ8N0W7 255 aaPredicted RBP17.26■□□□□ 0.35
PABPC4-216ENST00000492468 CHMP4AQ9BY43 222 aa17.26■□□□□ 0.35
PABPC4-216ENST00000492468 BOLA2Q9H3K6 86 aa17.26■□□□□ 0.35
PABPC4-216ENST00000492468 USP54Q70EL1 1684 aa17.26■□□□□ 0.35
PABPC4-216ENST00000492468 ATP8B1O43520 1251 aa17.26■□□□□ 0.35
PABPC4-216ENST00000492468 PFKFB2O60825 505 aa17.26■□□□□ 0.35
PABPC4-216ENST00000492468 TADA3O75528 432 aa17.26■□□□□ 0.35
PABPC4-216ENST00000492468 HSP90B1P14625 803 aaKnown RBP17.26■□□□□ 0.35
PABPC4-216ENST00000492468 RAD51AP2Q09MP3 1159 aa17.26■□□□□ 0.35
PABPC4-216ENST00000492468 TEX35Q5T0J7 233 aa17.26■□□□□ 0.35
PABPC4-216ENST00000492468 SYTL4Q96C24 671 aaPredicted RBP17.26■□□□□ 0.35
PABPC4-216ENST00000492468 ZNF396Q96N95 335 aaPredicted RBP17.26■□□□□ 0.35
PABPC4-216ENST00000492468 FEZ2Q9UHY8 353 aaPredicted RBP17.26■□□□□ 0.35
PABPC4-216ENST00000492468 DIP2BQ9P265 1576 aa17.25■□□□□ 0.35
PABPC4-216ENST00000492468 ANXA1P04083 346 aa17.25■□□□□ 0.35
PABPC4-216ENST00000492468 UBXN4Q92575 508 aa17.25■□□□□ 0.35
PABPC4-216ENST00000492468 ERCC4Q92889 916 aaPredicted RBP17.25■□□□□ 0.35
PABPC4-216ENST00000492468 SRRTQ9BXP5 876 aaKnown RBP17.25■□□□□ 0.35
PABPC4-216ENST00000492468 C9orf78Q9NZ63 289 aaPredicted RBP17.25■□□□□ 0.35
PABPC4-216ENST00000492468 IFNKQ9P0W0 207 aa17.25■□□□□ 0.35
PABPC4-216ENST00000492468 ADAMTS13Q76LX8 1427 aa17.25■□□□□ 0.35
PABPC4-216ENST00000492468 NEDD4P46934 1319 aa17.25■□□□□ 0.35
PABPC4-216ENST00000492468 HOXC9P31274 260 aa17.24■□□□□ 0.35
PABPC4-216ENST00000492468 TXLNBQ8N3L3 684 aa17.24■□□□□ 0.35
PABPC4-216ENST00000492468 HDAC5Q9UQL6 1122 aa17.24■□□□□ 0.35
PABPC4-216ENST00000492468 TSPOAP1O95153 1857 aa17.24■□□□□ 0.35
PABPC4-216ENST00000492468 NRDCO43847 1150 aa17.24■□□□□ 0.35
PABPC4-216ENST00000492468 SMC2O95347 1197 aa17.24■□□□□ 0.35
PABPC4-216ENST00000492468 CTDNEP1O95476 244 aa17.24■□□□□ 0.35
PABPC4-216ENST00000492468 DPCR1Q3MIW9 517 aa17.24■□□□□ 0.35
PABPC4-216ENST00000492468 TRIM65Q6PJ69 517 aa17.24■□□□□ 0.35
PABPC4-216ENST00000492468 ILDR1Q86SU0 546 aaPredicted RBP17.24■□□□□ 0.35
PABPC4-216ENST00000492468 CCP110O43303 1012 aa17.23■□□□□ 0.35
PABPC4-216ENST00000492468 MRPS27Q92552 414 aaKnown RBP17.23■□□□□ 0.35
PABPC4-216ENST00000492468 RFX7Q2KHR2 1363 aa17.23■□□□□ 0.35
PABPC4-216ENST00000492468 SALL1Q9NSC2 1324 aa17.23■□□□□ 0.35
PABPC4-216ENST00000492468 FANCGO15287 622 aa17.23■□□□□ 0.35
PABPC4-216ENST00000492468 ME1P48163 572 aa17.23■□□□□ 0.35
PABPC4-216ENST00000492468 G3BP1Q13283 466 aaKnown RBP eCLIP17.23■□□□□ 0.354e-7■□□□□ 10.4
PABPC4-216ENST00000492468 NEK11Q8NG66 645 aa17.23■□□□□ 0.35
PABPC4-216ENST00000492468 KAZALD1Q96I82 304 aa17.23■□□□□ 0.35
PABPC4-216ENST00000492468 KIAA1468Q9P260 1216 aa17.23■□□□□ 0.35
PABPC4-216ENST00000492468 MAP3K2Q9Y2U5 619 aa17.23■□□□□ 0.35
PABPC4-216ENST00000492468 RGPD8O14715 1765 aaPredicted RBP17.23■□□□□ 0.35
PABPC4-216ENST00000492468 UTYO14607 1347 aa17.23■□□□□ 0.35
PABPC4-216ENST00000492468 A0A1W2PQ27 194 aa17.22■□□□□ 0.35
PABPC4-216ENST00000492468 A0A1W2PQ64 194 aa17.22■□□□□ 0.35
PABPC4-216ENST00000492468 A0A1W2PQD8 194 aa17.22■□□□□ 0.35
PABPC4-216ENST00000492468 PTPDC1A2A3K4 754 aa17.22■□□□□ 0.35
PABPC4-216ENST00000492468 EFCAB8A8MWE9 144 aa17.22■□□□□ 0.35
PABPC4-216ENST00000492468 CCDC158Q5M9N0 1113 aa17.22■□□□□ 0.35
PABPC4-216ENST00000492468 FBXW7Q969H0 707 aa17.22■□□□□ 0.35
PABPC4-216ENST00000492468 DNAI1Q9UI46 699 aa17.22■□□□□ 0.35
PABPC4-216ENST00000492468 LMO7Q8WWI1 1683 aa17.22■□□□□ 0.35
PABPC4-216ENST00000492468 CYP21A2P08686 494 aa17.22■□□□□ 0.35
PABPC4-216ENST00000492468 TPM1P09493 284 aa17.22■□□□□ 0.35
PABPC4-216ENST00000492468 NCAPHQ15003 741 aa17.22■□□□□ 0.35
PABPC4-216ENST00000492468 HOMER1Q86YM7 354 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms