RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 HIBADHP31937 336 aaKnown RBP5.37□□□□□ -1.55
TRA2B-215ENST00000492417 CHRNDQ07001 517 aa5.37□□□□□ -1.55
TRA2B-215ENST00000492417 FOXD4L6Q3SYB3 417 aaPredicted RBP5.37□□□□□ -1.55
TRA2B-215ENST00000492417 DALRD3Q5D0E6 543 aaKnown RBP5.37□□□□□ -1.55
TRA2B-215ENST00000492417 CLEC4GQ6UXB4 293 aa5.37□□□□□ -1.55
TRA2B-215ENST00000492417 FOXD4L3Q6VB84 417 aaPredicted RBP5.37□□□□□ -1.55
TRA2B-215ENST00000492417 CRACR2BQ8N4Y2 399 aaPredicted RBP5.37□□□□□ -1.55
TRA2B-215ENST00000492417 CELF1Q92879 486 aaKnown RBP5.37□□□□□ -1.55
TRA2B-215ENST00000492417 ANKRD2Q9GZV1 360 aa5.37□□□□□ -1.55
TRA2B-215ENST00000492417 GZF1Q9H116 711 aaPredicted RBP5.37□□□□□ -1.55
TRA2B-215ENST00000492417 BCL9LQ86UU0 1499 aa5.37□□□□□ -1.55
TRA2B-215ENST00000492417 LTBP4Q8N2S1 1624 aa5.37□□□□□ -1.55
TRA2B-215ENST00000492417 RAD17O75943 681 aa5.37□□□□□ -1.55
TRA2B-215ENST00000492417 CAMTA2O94983 1202 aa5.37□□□□□ -1.55
TRA2B-215ENST00000492417 MAPK8IP2Q13387 824 aaPredicted RBP5.37□□□□□ -1.55
TRA2B-215ENST00000492417 NIM1KQ8IY84 436 aa5.37□□□□□ -1.55
TRA2B-215ENST00000492417 TRMT2AQ8IZ69 625 aaKnown RBP5.37□□□□□ -1.55
TRA2B-215ENST00000492417 XAGE2Q96GT9 111 aa5.37□□□□□ -1.55
TRA2B-215ENST00000492417 PIM2Q9P1W9 311 aa5.37□□□□□ -1.55
TRA2B-215ENST00000492417 TNS2Q63HR2 1409 aa5.37□□□□□ -1.55
TRA2B-215ENST00000492417 PPEF1O14829 653 aaPredicted RBP5.36□□□□□ -1.55
TRA2B-215ENST00000492417 TNNT3P45378 269 aaPredicted RBP5.36□□□□□ -1.55
TRA2B-215ENST00000492417 BCAMP50895 628 aa5.36□□□□□ -1.55
TRA2B-215ENST00000492417 EIF6P56537 245 aaKnown RBP5.36□□□□□ -1.55
TRA2B-215ENST00000492417 HAND2P61296 217 aa5.36□□□□□ -1.55
TRA2B-215ENST00000492417 VPS53Q5VIR6 699 aa5.36□□□□□ -1.55
TRA2B-215ENST00000492417 KIAA0825Q8IV33 1275 aa5.36□□□□□ -1.55
TRA2B-215ENST00000492417 EDC3Q96F86 508 aaKnown RBP5.36□□□□□ -1.55
TRA2B-215ENST00000492417 PDGFDQ9GZP0 370 aaPredicted RBP5.36□□□□□ -1.55
TRA2B-215ENST00000492417 CWC22Q9HCG8 908 aaKnown RBP5.36□□□□□ -1.55
TRA2B-215ENST00000492417 ADGRB2O60241 1585 aa5.36□□□□□ -1.55
TRA2B-215ENST00000492417 GYS1P13807 737 aa5.36□□□□□ -1.55
TRA2B-215ENST00000492417 SLC9C2Q5TAH2 1124 aa5.36□□□□□ -1.55
TRA2B-215ENST00000492417 RC3H1Q5TC82 1133 aaKnown RBP5.36□□□□□ -1.55
TRA2B-215ENST00000492417 PRR5LQ6MZQ0 368 aa5.36□□□□□ -1.55
TRA2B-215ENST00000492417 ZSCAN25Q6NSZ9 544 aa5.36□□□□□ -1.55
TRA2B-215ENST00000492417 NRKQ7Z2Y5 1582 aa5.36□□□□□ -1.55
TRA2B-215ENST00000492417 CCDC125Q86Z20 511 aa5.36□□□□□ -1.55
TRA2B-215ENST00000492417 TTLL11Q8NHH1 800 aa5.36□□□□□ -1.55
TRA2B-215ENST00000492417 NACAP1Q9BZK3 213 aa5.36□□□□□ -1.55
TRA2B-215ENST00000492417 NWD1Q149M9 1564 aa5.36□□□□□ -1.55
TRA2B-215ENST00000492417 CEMIPQ8WUJ3 1361 aa5.36□□□□□ -1.55
TRA2B-215ENST00000492417 ERICH2A1L162 156 aa5.36□□□□□ -1.55
TRA2B-215ENST00000492417 LMOD1P29536 600 aaPredicted RBP5.36□□□□□ -1.55
TRA2B-215ENST00000492417 SCNN1DP51172 638 aa5.36□□□□□ -1.55
TRA2B-215ENST00000492417 RNF20Q5VTR2 975 aa5.36□□□□□ -1.55
TRA2B-215ENST00000492417 NAA16Q6N069 864 aaPredicted RBP5.36□□□□□ -1.55
TRA2B-215ENST00000492417 SYNE3Q6ZMZ3 975 aa5.36□□□□□ -1.55
TRA2B-215ENST00000492417 PIBF1Q8WXW3 757 aa5.36□□□□□ -1.55
TRA2B-215ENST00000492417 RGS17Q9UGC6 210 aaPredicted RBP5.36□□□□□ -1.55
TRA2B-215ENST00000492417 PLSCR1O15162 318 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 PDIA6Q15084 440 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 HDAC9Q9UKV0 1011 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 BCL9O00512 1426 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 USP42Q9H9J4 1324 aaKnown RBP5.35□□□□□ -1.55
TRA2B-215ENST00000492417 KNDC1Q76NI1 1749 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 GOLGA6L3A6NEY3 463 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 MYO1BO43795 1136 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 UQCRFS1P1P0C7P4 283 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 GSE1Q14687 1217 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 PUM3Q15397 648 aaKnown RBP5.35□□□□□ -1.55
TRA2B-215ENST00000492417 TNNI3KQ59H18 835 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 UPF1Q92900 1129 aaKnown RBP eCLIP5.35□□□□□ -1.555e-10■■□□□ 13.8
TRA2B-215ENST00000492417 MASTLQ96GX5 879 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 NAPBQ9H115 298 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 DCTPP1Q9H773 170 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 ZNF277Q9NRM2 450 aaPredicted RBP5.35□□□□□ -1.55
TRA2B-215ENST00000492417 FPGT-TNNI3KV9GXZ4 949 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 USP32Q8NFA0 1604 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 PIK3C2AO00443 1686 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 ABCC4O15439 1325 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 LRP6O75581 1613 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 LDHBP07195 334 aaKnown RBP5.35□□□□□ -1.55
TRA2B-215ENST00000492417 DPEP1P16444 411 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 ADORA1P30542 326 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 PDE1AP54750 535 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 TTLL5Q6EMB2 1281 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 OLFM4Q6UX06 510 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 MAGEB6Q8N7X4 407 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 MKNK2Q9HBH9 465 aa5.35□□□□□ -1.55
TRA2B-215ENST00000492417 A0A0U1RQG5 324 aaPredicted RBP5.34□□□□□ -1.55
TRA2B-215ENST00000492417 CPLX1O14810 134 aa5.34□□□□□ -1.55
TRA2B-215ENST00000492417 LDHCP07864 332 aa5.34□□□□□ -1.55
TRA2B-215ENST00000492417 NPR1P16066 1061 aa5.34□□□□□ -1.55
TRA2B-215ENST00000492417 AKAP17AQ02040 695 aaKnown RBP5.34□□□□□ -1.55
TRA2B-215ENST00000492417 TCP10Q12799 353 aa5.34□□□□□ -1.55
TRA2B-215ENST00000492417 MFSD14BQ5SR56 506 aa5.34□□□□□ -1.55
TRA2B-215ENST00000492417 CARMIL3Q8ND23 1372 aa5.34□□□□□ -1.55
TRA2B-215ENST00000492417 KIF20BQ96Q89 1820 aa5.34□□□□□ -1.55
TRA2B-215ENST00000492417 H7C1W4 665 aa5.34□□□□□ -1.55
TRA2B-215ENST00000492417 RANBP6O60518 1105 aaKnown RBP5.34□□□□□ -1.55
TRA2B-215ENST00000492417 DPY19L2Q6NUT2 758 aa5.34□□□□□ -1.55
TRA2B-215ENST00000492417 CCAR1Q8IX12 1150 aaKnown RBP5.34□□□□□ -1.55
TRA2B-215ENST00000492417 NUP133Q8WUM0 1156 aa5.34□□□□□ -1.55
TRA2B-215ENST00000492417 LPIN2Q92539 896 aa5.34□□□□□ -1.55
TRA2B-215ENST00000492417 EAF2Q96CJ1 260 aaPredicted RBP5.34□□□□□ -1.55
TRA2B-215ENST00000492417 ISCA1Q9BUE6 129 aa5.34□□□□□ -1.55
TRA2B-215ENST00000492417 ZNF804BA4D1E1 1349 aa5.34□□□□□ -1.55
TRA2B-215ENST00000492417 CNTNAP4Q9C0A0 1308 aa5.34□□□□□ -1.55
TRA2B-215ENST00000492417 HIP1O00291 1037 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 808.2 ms