RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 SPG7Q9UQ90 795 aa7.49□□□□□ -1.21
CCDC6-202ENST00000491922 EIF3CLB5ME19 914 aaKnown RBP7.48□□□□□ -1.21
CCDC6-202ENST00000491922 F6X3S4 739 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 KINO60870 393 aaKnown RBP7.48□□□□□ -1.21
CCDC6-202ENST00000491922 MAP4K4O95819 1239 aaPredicted RBP7.48□□□□□ -1.21
CCDC6-202ENST00000491922 CPP00450 1065 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 BRD3Q15059 726 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 TRIM65Q6PJ69 517 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 LARP1Q6PKG0 1096 aaKnown RBP7.48□□□□□ -1.21
CCDC6-202ENST00000491922 CCDC73Q6ZRK6 1079 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 FCHSD1Q86WN1 690 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 NUTM1Q86Y26 1132 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 DRC1Q96MC2 740 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 EIF3CQ99613 913 aaKnown RBP7.48□□□□□ -1.21
CCDC6-202ENST00000491922 BPIFA3Q9BQP9 254 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 PARP3Q9Y6F1 533 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 NRKQ7Z2Y5 1582 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 CCDC151A5D8V7 595 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 ZSCAN12O43309 604 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 CORO7P57737 925 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 RESTQ13127 1097 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 MLECQ14165 292 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 TSGA10IPQ3SY00 556 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 RSRC2Q7L4I2 434 aaKnown RBP7.48□□□□□ -1.21
CCDC6-202ENST00000491922 PRAM1Q96QH2 718 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 IL1RAPL2Q9NP60 686 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 SLC52A1Q9NWF4 448 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 EMILIN1Q9Y6C2 1016 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 MINK1Q8N4C8 1332 aaPredicted RBP7.48□□□□□ -1.21
CCDC6-202ENST00000491922 PXDNLA1KZ92 1463 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 MAP3K5Q99683 1374 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 CACNA1FO60840 1977 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 MAP2K7O14733 419 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 EIF3JO75822 258 aaKnown RBP7.48□□□□□ -1.21
CCDC6-202ENST00000491922 CCDC172P0C7W6 258 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 NECTIN1Q15223 517 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 G2E3Q7L622 706 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 CCAR1Q8IX12 1150 aaKnown RBP7.48□□□□□ -1.21
CCDC6-202ENST00000491922 SSH3Q8TE77 659 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 GOLGA1Q92805 767 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 SYTL4Q96C24 671 aaPredicted RBP7.48□□□□□ -1.21
CCDC6-202ENST00000491922 XPO4Q9C0E2 1151 aaKnown RBP7.48□□□□□ -1.21
CCDC6-202ENST00000491922 TOMM22Q9NS69 142 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 CABP1Q9NZU7 370 aa7.48□□□□□ -1.21
CCDC6-202ENST00000491922 USP42Q9H9J4 1324 aaKnown RBP7.47□□□□□ -1.21
CCDC6-202ENST00000491922 FAM208AQ9UK61 1670 aaKnown RBP7.47□□□□□ -1.21
CCDC6-202ENST00000491922 GOLGA6L9A6NEM1 432 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 H3BQF6 201 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 DTNBO60941 627 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 PTH1RQ03431 593 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 PPP2R3AQ06190 1150 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 GNL2Q13823 731 aaKnown RBP7.47□□□□□ -1.21
CCDC6-202ENST00000491922 ZRSR1Q15695 479 aaKnown RBP7.47□□□□□ -1.21
CCDC6-202ENST00000491922 LONRF2Q1L5Z9 754 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 GRIPAP1Q4V328 841 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 MCTP2Q6DN12 878 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 MMS22LQ6ZRQ5 1243 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.47□□□□□ -1.21
CCDC6-202ENST00000491922 EFCAB13Q8IY85 973 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 PARD6BQ9BYG5 372 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 TAOK2Q9UL54 1235 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 CEP83Q9Y592 693 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 KIDINS220Q9ULH0 1771 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 SRGAP3O43295 1099 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 GLRX3O76003 335 aaKnown RBP7.47□□□□□ -1.21
CCDC6-202ENST00000491922 FBLN1P23142 703 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 MAP3K9P80192 1104 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 FAM160A1Q05DH4 1040 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 APOBRQ0VD83 1088 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 RHPN1Q8TCX5 695 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 HNRNPLLQ8WVV9 542 aaKnown RBP7.47□□□□□ -1.21
CCDC6-202ENST00000491922 CEP89Q96ST8 783 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 STK31Q9BXU1 1019 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 IFNKQ9P0W0 207 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 VPS18Q9P253 973 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 RCOR1Q9UKL0 485 aa7.47□□□□□ -1.21
CCDC6-202ENST00000491922 CRB1P82279 1406 aa7.46□□□□□ -1.21
CCDC6-202ENST00000491922 POTEB2H3BUK9 544 aa7.46□□□□□ -1.22
CCDC6-202ENST00000491922 TXLNAP40222 546 aa7.46□□□□□ -1.22
CCDC6-202ENST00000491922 GSCP56915 257 aaPredicted RBP7.46□□□□□ -1.22
CCDC6-202ENST00000491922 CREB3L3Q68CJ9 461 aa7.46□□□□□ -1.22
CCDC6-202ENST00000491922 ATL3Q6DD88 541 aa7.46□□□□□ -1.22
CCDC6-202ENST00000491922 BLOC1S2Q6QNY1 142 aa7.46□□□□□ -1.22
CCDC6-202ENST00000491922 HDXQ7Z353 690 aa7.46□□□□□ -1.22
CCDC6-202ENST00000491922 GPATCH11Q8N954 259 aa7.46□□□□□ -1.22
CCDC6-202ENST00000491922 CDK19Q9BWU1 502 aa7.46□□□□□ -1.22
CCDC6-202ENST00000491922 FAM107BQ9H098 131 aa7.46□□□□□ -1.22
CCDC6-202ENST00000491922 STK26Q9P289 416 aa7.46□□□□□ -1.22
CCDC6-202ENST00000491922 MRFAP1Q9Y605 127 aa7.46□□□□□ -1.22
CCDC6-202ENST00000491922 EDC4Q6P2E9 1401 aaKnown RBP7.46□□□□□ -1.22
CCDC6-202ENST00000491922 H3BQV1 296 aa7.46□□□□□ -1.22
CCDC6-202ENST00000491922 KIF1CO43896 1103 aaKnown RBP7.46□□□□□ -1.22
CCDC6-202ENST00000491922 IFFO2Q5TF58 517 aa7.46□□□□□ -1.22
CCDC6-202ENST00000491922 ENGASEQ8NFI3 743 aa7.46□□□□□ -1.22
CCDC6-202ENST00000491922 RBM8AQ9Y5S9 174 aaKnown RBP7.46□□□□□ -1.22
CCDC6-202ENST00000491922 ERLIN1O75477 346 aa7.45□□□□□ -1.22
CCDC6-202ENST00000491922 SURF6O75683 361 aaKnown RBP7.45□□□□□ -1.22
CCDC6-202ENST00000491922 MYCNP04198 464 aaPredicted RBP7.45□□□□□ -1.22
CCDC6-202ENST00000491922 UBTFL1P0CB47 393 aaPredicted RBP7.45□□□□□ -1.22
CCDC6-202ENST00000491922 RPS6KB1P23443 525 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms