RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 GDF6Q6KF10 455 aaPredicted RBP7.19□□□□□ -1.26
VTA1-204ENST00000491881 VTI1AQ96AJ9 217 aa7.19□□□□□ -1.26
VTA1-204ENST00000491881 PLD4Q96BZ4 506 aa7.19□□□□□ -1.26
VTA1-204ENST00000491881 TRAIPQ9BWF2 469 aa7.19□□□□□ -1.26
VTA1-204ENST00000491881 TLR7Q9NYK1 1049 aaKnown RBP7.19□□□□□ -1.26
VTA1-204ENST00000491881 CARNS1A5YM72 827 aa7.18□□□□□ -1.26
VTA1-204ENST00000491881 F8W735 103 aaPredicted RBP7.18□□□□□ -1.26
VTA1-204ENST00000491881 PAX4O43316 350 aa7.18□□□□□ -1.26
VTA1-204ENST00000491881 PTCD1O75127 700 aaKnown RBP7.18□□□□□ -1.26
VTA1-204ENST00000491881 SWI5Q1ZZU3 235 aa7.18□□□□□ -1.26
VTA1-204ENST00000491881 C11orf91Q3C1V1 193 aa7.18□□□□□ -1.26
VTA1-204ENST00000491881 B4GALNT3Q6L9W6 998 aa7.18□□□□□ -1.26
VTA1-204ENST00000491881 TMEM130Q8N3G9 435 aa7.18□□□□□ -1.26
VTA1-204ENST00000491881 DCAF11Q8TEB1 546 aa7.18□□□□□ -1.26
VTA1-204ENST00000491881 QTRT2Q9H974 415 aaKnown RBP7.18□□□□□ -1.26
VTA1-204ENST00000491881 COL17A1Q9UMD9 1497 aaPredicted RBP7.17□□□□□ -1.26
VTA1-204ENST00000491881 J3QW42 95 aa7.17□□□□□ -1.26
VTA1-204ENST00000491881 GHRHP01286 108 aa7.17□□□□□ -1.26
VTA1-204ENST00000491881 PSAPP07602 524 aa7.17□□□□□ -1.26
VTA1-204ENST00000491881 IL22RA1Q8N6P7 574 aa7.17□□□□□ -1.26
VTA1-204ENST00000491881 RBSNQ9H1K0 784 aa7.17□□□□□ -1.26
VTA1-204ENST00000491881 USP20Q9Y2K6 914 aa7.17□□□□□ -1.26
VTA1-204ENST00000491881 RTCBQ9Y3I0 505 aaKnown RBP7.17□□□□□ -1.26
VTA1-204ENST00000491881 LOC102724428A0A0B4J2F2 783 aa7.16□□□□□ -1.26
VTA1-204ENST00000491881 FOXO3O43524 673 aa7.16□□□□□ -1.26
VTA1-204ENST00000491881 XYLBO75191 536 aa7.16□□□□□ -1.26
VTA1-204ENST00000491881 GLB1P16278 677 aa7.16□□□□□ -1.26
VTA1-204ENST00000491881 SIK1P57059 783 aa7.16□□□□□ -1.26
VTA1-204ENST00000491881 CMTR1Q8N1G2 835 aaKnown RBP7.16□□□□□ -1.26
VTA1-204ENST00000491881 SRA1Q9HD15 236 aaKnown RBP7.16□□□□□ -1.26
VTA1-204ENST00000491881 OPLAHO14841 1288 aa7.15□□□□□ -1.26
VTA1-204ENST00000491881 EGFRP00533 1210 aa7.15□□□□□ -1.26
VTA1-204ENST00000491881 CD97P48960 835 aa7.15□□□□□ -1.26
VTA1-204ENST00000491881 IRAK1P51617 712 aa7.15□□□□□ -1.26
VTA1-204ENST00000491881 FAM69CQ0P6D2 419 aa7.15□□□□□ -1.26
VTA1-204ENST00000491881 MAP4K3Q8IVH8 894 aa7.15□□□□□ -1.26
VTA1-204ENST00000491881 RGL4Q8IZJ4 473 aa7.15□□□□□ -1.26
VTA1-204ENST00000491881 CLP1Q92989 425 aaKnown RBP7.15□□□□□ -1.26
VTA1-204ENST00000491881 MYO19Q96H55 970 aa7.15□□□□□ -1.26
VTA1-204ENST00000491881 NSUN5Q96P11 429 aaKnown RBP7.15□□□□□ -1.26
VTA1-204ENST00000491881 GSC2O15499 205 aa7.14□□□□□ -1.27
VTA1-204ENST00000491881 PRMT3O60678 531 aa7.14□□□□□ -1.27
VTA1-204ENST00000491881 TXKP42681 527 aa7.14□□□□□ -1.27
VTA1-204ENST00000491881 SETDB1Q15047 1291 aa7.14□□□□□ -1.27
VTA1-204ENST00000491881 AGGF1Q8N302 714 aaeCLIP7.14□□□□□ -1.27
VTA1-204ENST00000491881 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.14□□□□□ -1.27
VTA1-204ENST00000491881 RAXQ9Y2V3 346 aa7.14□□□□□ -1.27
VTA1-204ENST00000491881 MMP20O60882 483 aa7.13□□□□□ -1.27
VTA1-204ENST00000491881 BRD1O95696 1058 aa7.13□□□□□ -1.27
VTA1-204ENST00000491881 ATP2B4P23634 1241 aa7.13□□□□□ -1.27
VTA1-204ENST00000491881 WEE1P30291 646 aa7.13□□□□□ -1.27
VTA1-204ENST00000491881 TREML1Q86YW5 311 aa7.13□□□□□ -1.27
VTA1-204ENST00000491881 AEBP1Q8IUX7 1158 aa7.13□□□□□ -1.27
VTA1-204ENST00000491881 COBLO75128 1261 aa7.12□□□□□ -1.27
VTA1-204ENST00000491881 IGLV1-40P01703 118 aa7.12□□□□□ -1.27
VTA1-204ENST00000491881 SOX18P35713 384 aa7.12□□□□□ -1.27
VTA1-204ENST00000491881 Q6ZS46 218 aa7.12□□□□□ -1.27
VTA1-204ENST00000491881 PRIMPOLQ96LW4 560 aa7.12□□□□□ -1.27
VTA1-204ENST00000491881 MUC3BQ9H195 1237 aa7.12□□□□□ -1.27
VTA1-204ENST00000491881 STOML1Q9UBI4 398 aa7.12□□□□□ -1.27
VTA1-204ENST00000491881 TRIM33Q9UPN9 1127 aa7.12□□□□□ -1.27
VTA1-204ENST00000491881 TGFB1P01137 390 aa7.11□□□□□ -1.27
VTA1-204ENST00000491881 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.11□□□□□ -1.27
VTA1-204ENST00000491881 CACTIN-AS1Q8N1I8 211 aa7.11□□□□□ -1.27
VTA1-204ENST00000491881 LRFN2Q9ULH4 789 aa7.11□□□□□ -1.27
VTA1-204ENST00000491881 PPME1Q9Y570 386 aa7.11□□□□□ -1.27
VTA1-204ENST00000491881 KRTAP4-8A0A0G2JLE6 195 aa7.1□□□□□ -1.27
VTA1-204ENST00000491881 ZBTB7CA1YPR0 619 aa7.1□□□□□ -1.27
VTA1-204ENST00000491881 PATL2C9JE40 543 aaKnown RBP7.1□□□□□ -1.27
VTA1-204ENST00000491881 KCNMB2Q9Y691 235 aa7.1□□□□□ -1.27
VTA1-204ENST00000491881 KIAA1324LA8MWY0 1029 aaPredicted RBP7.09□□□□□ -1.27
VTA1-204ENST00000491881 DHX15O43143 795 aaKnown RBP7.09□□□□□ -1.27
VTA1-204ENST00000491881 MED26O95402 600 aa7.09□□□□□ -1.27
VTA1-204ENST00000491881 HOXD8P13378 290 aaPredicted RBP7.09□□□□□ -1.27
VTA1-204ENST00000491881 SSFA2P28290 1259 aa7.09□□□□□ -1.27
VTA1-204ENST00000491881 GP2P55259 537 aaKnown RBP7.09□□□□□ -1.27
VTA1-204ENST00000491881 KCNA1Q09470 495 aa7.09□□□□□ -1.27
VTA1-204ENST00000491881 OCLNQ16625 522 aa7.09□□□□□ -1.27
VTA1-204ENST00000491881 FMNL2Q96PY5 1086 aa7.09□□□□□ -1.27
VTA1-204ENST00000491881 UBL7Q96S82 380 aaPredicted RBP7.09□□□□□ -1.27
VTA1-204ENST00000491881 CEP41Q9BYV8 373 aa7.09□□□□□ -1.27
VTA1-204ENST00000491881 CXXC1Q9P0U4 656 aaPredicted RBP7.09□□□□□ -1.27
VTA1-204ENST00000491881 SLAIN2Q9P270 581 aa7.09□□□□□ -1.27
VTA1-204ENST00000491881 OAS3Q9Y6K5 1087 aaKnown RBP7.09□□□□□ -1.27
VTA1-204ENST00000491881 TAL1P17542 331 aaPredicted RBP7.08□□□□□ -1.28
VTA1-204ENST00000491881 MTMR7Q9Y216 660 aa7.08□□□□□ -1.28
VTA1-204ENST00000491881 LINC01387J3KSC0 135 aa7.07□□□□□ -1.28
VTA1-204ENST00000491881 YBX3P16989 372 aaKnown RBP eCLIP7.07□□□□□ -1.28
VTA1-204ENST00000491881 GRIK1P39086 918 aa7.07□□□□□ -1.28
VTA1-204ENST00000491881 ACAD11Q709F0 780 aa7.07□□□□□ -1.28
VTA1-204ENST00000491881 NLRP13Q86W25 1043 aa7.07□□□□□ -1.28
VTA1-204ENST00000491881 GALNT11Q8NCW6 608 aa7.07□□□□□ -1.28
VTA1-204ENST00000491881 MKNK1Q9BUB5 465 aa7.07□□□□□ -1.28
VTA1-204ENST00000491881 CD68P34810 354 aaPredicted RBP7.06□□□□□ -1.28
VTA1-204ENST00000491881 NFIAQ12857 509 aa7.06□□□□□ -1.28
VTA1-204ENST00000491881 FKBP5Q13451 457 aaPredicted RBP7.06□□□□□ -1.28
VTA1-204ENST00000491881 COX20Q5RI15 118 aa7.06□□□□□ -1.28
VTA1-204ENST00000491881 PHLDB3Q6NSJ2 640 aa7.06□□□□□ -1.28
VTA1-204ENST00000491881 ZDHHC13Q8IUH4 622 aa7.06□□□□□ -1.28
VTA1-204ENST00000491881 ARMC10Q8N2F6 343 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms