RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 EPS8L3Q8TE67 593 aaKnown RBP9.48□□□□□ -0.89
TM9SF3-206ENST00000490192 WHAMMQ8TF30 809 aa9.48□□□□□ -0.89
TM9SF3-206ENST00000490192 CCDC74AQ96AQ1 378 aa9.48□□□□□ -0.89
TM9SF3-206ENST00000490192 FOXD3Q9UJU5 478 aaPredicted RBP9.48□□□□□ -0.89
TM9SF3-206ENST00000490192 FGRP09769 529 aa9.47□□□□□ -0.89
TM9SF3-206ENST00000490192 ARSJQ5FYB0 599 aaPredicted RBP9.47□□□□□ -0.89
TM9SF3-206ENST00000490192 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.47□□□□□ -0.891e-8■■■□□ 17.5
TM9SF3-206ENST00000490192 TBX22Q9Y458 520 aa9.47□□□□□ -0.89
TM9SF3-206ENST00000490192 TATP17735 454 aaPredicted RBP9.46□□□□□ -0.9
TM9SF3-206ENST00000490192 PAK2Q13177 524 aa9.46□□□□□ -0.9
TM9SF3-206ENST00000490192 SDE2Q6IQ49 451 aa9.46□□□□□ -0.9
TM9SF3-206ENST00000490192 FIGNL1Q6PIW4 674 aa9.46□□□□□ -0.9
TM9SF3-206ENST00000490192 LYPD4Q6UWN0 246 aa9.46□□□□□ -0.9
TM9SF3-206ENST00000490192 OSBPL2Q9H1P3 480 aa9.46□□□□□ -0.9
TM9SF3-206ENST00000490192 TNFRSF21O75509 655 aa9.45□□□□□ -0.9
TM9SF3-206ENST00000490192 CELA2BP08218 269 aaPredicted RBP9.45□□□□□ -0.9
TM9SF3-206ENST00000490192 USP17L7P0C7H9 530 aa9.45□□□□□ -0.9
TM9SF3-206ENST00000490192 ATF4P18848 351 aaPredicted RBP9.45□□□□□ -0.9
TM9SF3-206ENST00000490192 MAP2K3P46734 347 aa9.45□□□□□ -0.9
TM9SF3-206ENST00000490192 GJA8P48165 433 aa9.45□□□□□ -0.9
TM9SF3-206ENST00000490192 RHPN1Q8TCX5 695 aa9.45□□□□□ -0.9
TM9SF3-206ENST00000490192 CRISPLD1Q9H336 500 aa9.45□□□□□ -0.9
TM9SF3-206ENST00000490192 FAM8A1Q9UBU6 413 aa9.45□□□□□ -0.9
TM9SF3-206ENST00000490192 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.45□□□□□ -0.9
TM9SF3-206ENST00000490192 GJA3Q9Y6H8 435 aa9.45□□□□□ -0.9
TM9SF3-206ENST00000490192 TGFBR3LH3BV60 316 aa9.44□□□□□ -0.9
TM9SF3-206ENST00000490192 SBNO2Q9Y2G9 1366 aa9.44□□□□□ -0.9
TM9SF3-206ENST00000490192 ARHGEF15O94989 841 aa9.43□□□□□ -0.9
TM9SF3-206ENST00000490192 BCRP11274 1271 aa9.43□□□□□ -0.9
TM9SF3-206ENST00000490192 ST13P50502 369 aaKnown RBP9.43□□□□□ -0.9
TM9SF3-206ENST00000490192 BMS1Q14692 1282 aaKnown RBP9.43□□□□□ -0.9
TM9SF3-206ENST00000490192 BICDL1Q6ZP65 573 aa9.43□□□□□ -0.9
TM9SF3-206ENST00000490192 NEDD1Q8NHV4 660 aa9.43□□□□□ -0.9
TM9SF3-206ENST00000490192 SNX29Q8TEQ0 813 aa9.43□□□□□ -0.9
TM9SF3-206ENST00000490192 GPRASP2Q96D09 838 aa9.43□□□□□ -0.9
TM9SF3-206ENST00000490192 SCARF2Q96GP6 870 aaPredicted RBP9.43□□□□□ -0.9
TM9SF3-206ENST00000490192 ZFYVE28Q9HCC9 887 aa9.43□□□□□ -0.9
TM9SF3-206ENST00000490192 COPRSQ9NQ92 184 aa9.43□□□□□ -0.9
TM9SF3-206ENST00000490192 ATXN7L1Q9ULK2 861 aaPredicted RBP9.43□□□□□ -0.9
TM9SF3-206ENST00000490192 HIF1AQ16665 826 aa9.42□□□□□ -0.9
TM9SF3-206ENST00000490192 EGFLAMQ63HQ2 1017 aa9.42□□□□□ -0.9
TM9SF3-206ENST00000490192 XKR5Q6UX68 686 aa9.42□□□□□ -0.9
TM9SF3-206ENST00000490192 ERMP1Q7Z2K6 904 aa9.42□□□□□ -0.9
TM9SF3-206ENST00000490192 ZNF438Q7Z4V0 828 aa9.42□□□□□ -0.9
TM9SF3-206ENST00000490192 NLRP8Q86W28 1048 aa9.42□□□□□ -0.9
TM9SF3-206ENST00000490192 NLGN1Q8N2Q7 840 aa9.42□□□□□ -0.9
TM9SF3-206ENST00000490192 ZDHHC3Q9NYG2 299 aa9.42□□□□□ -0.9
TM9SF3-206ENST00000490192 USP20Q9Y2K6 914 aa9.42□□□□□ -0.9
TM9SF3-206ENST00000490192 IDH3AP50213 366 aa9.41□□□□□ -0.9
TM9SF3-206ENST00000490192 KCNMA1Q12791 1236 aa9.41□□□□□ -0.9
TM9SF3-206ENST00000490192 ZNF746Q6NUN9 644 aaPredicted RBP9.41□□□□□ -0.9
TM9SF3-206ENST00000490192 NXPE4Q6UWF7 544 aa9.41□□□□□ -0.9
TM9SF3-206ENST00000490192 C7orf43Q8WVR3 580 aa9.41□□□□□ -0.9
TM9SF3-206ENST00000490192 SUSD3Q96L08 255 aa9.41□□□□□ -0.9
TM9SF3-206ENST00000490192 NEUROD4Q9HD90 331 aa9.41□□□□□ -0.9
TM9SF3-206ENST00000490192 NPHS2Q9NP85 383 aa9.41□□□□□ -0.9
TM9SF3-206ENST00000490192 DMGDHQ9UI17 866 aaKnown RBP9.41□□□□□ -0.9
TM9SF3-206ENST00000490192 PCDHGC4Q9Y5F7 938 aa9.41□□□□□ -0.9
TM9SF3-206ENST00000490192 A0A1W2PNR3 127 aa9.4□□□□□ -0.9
TM9SF3-206ENST00000490192 PHACTR2O75167 634 aa9.4□□□□□ -0.9
TM9SF3-206ENST00000490192 THBS1P07996 1170 aa9.4□□□□□ -0.9
TM9SF3-206ENST00000490192 BMP4P12644 408 aa9.4□□□□□ -0.9
TM9SF3-206ENST00000490192 ZNF280CQ8ND82 737 aa9.4□□□□□ -0.9
TM9SF3-206ENST00000490192 ACDQ96AP0 544 aa9.4□□□□□ -0.9
TM9SF3-206ENST00000490192 KLRG1Q96E93 195 aa9.4□□□□□ -0.9
TM9SF3-206ENST00000490192 ABHD17AQ96GS6 310 aa9.4□□□□□ -0.9
TM9SF3-206ENST00000490192 OXCT2Q9BYC2 517 aaPredicted RBP9.4□□□□□ -0.9
TM9SF3-206ENST00000490192 BCO2Q9BYV7 579 aa9.4□□□□□ -0.9
TM9SF3-206ENST00000490192 ZCCHC2Q9C0B9 1178 aaKnown RBP9.4□□□□□ -0.9
TM9SF3-206ENST00000490192 SRCIN1Q9C0H9 1055 aa9.4□□□□□ -0.9
TM9SF3-206ENST00000490192 FNDC3AQ9Y2H6 1198 aaKnown RBP9.4□□□□□ -0.9
TM9SF3-206ENST00000490192 ATXN7O15265 892 aaPredicted RBP9.39□□□□□ -0.91
TM9SF3-206ENST00000490192 BNIP3LO60238 219 aa9.39□□□□□ -0.91
TM9SF3-206ENST00000490192 POLR3DP05423 398 aaPredicted RBP9.39□□□□□ -0.91
TM9SF3-206ENST00000490192 ATP4AP20648 1035 aa9.39□□□□□ -0.91
TM9SF3-206ENST00000490192 FGFR3P22607 806 aa9.39□□□□□ -0.91
TM9SF3-206ENST00000490192 TRIP4Q15650 581 aaPredicted RBP9.39□□□□□ -0.91
TM9SF3-206ENST00000490192 IER5Q5VY09 327 aa9.39□□□□□ -0.91
TM9SF3-206ENST00000490192 PDE12Q6L8Q7 609 aaKnown RBP9.39□□□□□ -0.91
TM9SF3-206ENST00000490192 JAZF1Q86VZ6 243 aa9.39□□□□□ -0.91
TM9SF3-206ENST00000490192 TMEM151AQ8N4L1 468 aa9.39□□□□□ -0.91
TM9SF3-206ENST00000490192 HSH2DQ96JZ2 352 aa9.39□□□□□ -0.91
TM9SF3-206ENST00000490192 LRRC4BQ9NT99 713 aa9.39□□□□□ -0.91
TM9SF3-206ENST00000490192 UBAP1LF5GYI3 381 aa9.38□□□□□ -0.91
TM9SF3-206ENST00000490192 GADD45BO75293 160 aaPredicted RBP9.38□□□□□ -0.91
TM9SF3-206ENST00000490192 ARSDP51689 593 aa9.38□□□□□ -0.91
TM9SF3-206ENST00000490192 PODNQ7Z5L7 613 aa9.38□□□□□ -0.91
TM9SF3-206ENST00000490192 CKAP2LQ8IYA6 745 aa9.38□□□□□ -0.91
TM9SF3-206ENST00000490192 CMTR1Q8N1G2 835 aaKnown RBP9.38□□□□□ -0.91
TM9SF3-206ENST00000490192 CHMP4AQ9BY43 222 aa9.38□□□□□ -0.91
TM9SF3-206ENST00000490192 ELP3Q9H9T3 547 aa9.38□□□□□ -0.91
TM9SF3-206ENST00000490192 KBTBD4Q9NVX7 518 aa9.38□□□□□ -0.91
TM9SF3-206ENST00000490192 GDF2Q9UK05 429 aaPredicted RBP9.38□□□□□ -0.91
TM9SF3-206ENST00000490192 RTCBQ9Y3I0 505 aaKnown RBP9.38□□□□□ -0.91
TM9SF3-206ENST00000490192 GDF11O95390 407 aa9.37□□□□□ -0.91
TM9SF3-206ENST00000490192 RASSF7Q02833 373 aa9.37□□□□□ -0.91
TM9SF3-206ENST00000490192 UBAP2LQ14157 1087 aaKnown RBP9.37□□□□□ -0.91
TM9SF3-206ENST00000490192 TCEAL1Q15170 157 aa9.37□□□□□ -0.91
TM9SF3-206ENST00000490192 RASGRP4Q8TDF6 673 aa9.37□□□□□ -0.91
TM9SF3-206ENST00000490192 SPACA7Q96KW9 195 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms