RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 ORC1Q13415 861 aa9.74□□□□□ -0.85
VPS26A-206ENST00000489794 CHRDQ9H2X0 955 aa9.74□□□□□ -0.85
VPS26A-206ENST00000489794 DNAJB12Q9NXW2 375 aaKnown RBP9.74□□□□□ -0.85
VPS26A-206ENST00000489794 CNTN3Q9P232 1028 aa9.74□□□□□ -0.85
VPS26A-206ENST00000489794 KLF15Q9UIH9 416 aa9.74□□□□□ -0.85
VPS26A-206ENST00000489794 PNMA6FA0A0J9YX94 578 aa9.73□□□□□ -0.85
VPS26A-206ENST00000489794 P4HBP07237 508 aaKnown RBP9.73□□□□□ -0.85
VPS26A-206ENST00000489794 EPXP11678 715 aa9.73□□□□□ -0.85
VPS26A-206ENST00000489794 ADH7P40394 386 aa9.73□□□□□ -0.85
VPS26A-206ENST00000489794 ZNF326Q5BKZ1 582 aaKnown RBP9.73□□□□□ -0.85
VPS26A-206ENST00000489794 FCHSD1Q86WN1 690 aa9.73□□□□□ -0.85
VPS26A-206ENST00000489794 ACDQ96AP0 544 aa9.73□□□□□ -0.85
VPS26A-206ENST00000489794 MDFIQ99750 246 aa9.73□□□□□ -0.85
VPS26A-206ENST00000489794 BCL2L13Q9BXK5 485 aa9.73□□□□□ -0.85
VPS26A-206ENST00000489794 LOC102724428A0A0B4J2F2 783 aa9.72□□□□□ -0.85
VPS26A-206ENST00000489794 BCRP11274 1271 aa9.72□□□□□ -0.85
VPS26A-206ENST00000489794 SIK1P57059 783 aa9.72□□□□□ -0.85
VPS26A-206ENST00000489794 TBC1D8BQ0IIM8 1120 aa9.72□□□□□ -0.85
VPS26A-206ENST00000489794 KANK3Q6NY19 840 aa9.72□□□□□ -0.85
VPS26A-206ENST00000489794 NCAPG2Q86XI2 1143 aa9.72□□□□□ -0.85
VPS26A-206ENST00000489794 IGFLR1Q9H665 355 aa9.72□□□□□ -0.85
VPS26A-206ENST00000489794 ENAMQ9NRM1 1142 aa9.72□□□□□ -0.85
VPS26A-206ENST00000489794 SALL4Q9UJQ4 1053 aa9.72□□□□□ -0.85
VPS26A-206ENST00000489794 SLC6A14Q9UN76 642 aa9.72□□□□□ -0.85
VPS26A-206ENST00000489794 EREGO14944 169 aa9.71□□□□□ -0.86
VPS26A-206ENST00000489794 OIP5O43482 229 aa9.71□□□□□ -0.86
VPS26A-206ENST00000489794 PRPF40AO75400 957 aaKnown RBP9.71□□□□□ -0.86
VPS26A-206ENST00000489794 GHRHP01286 108 aa9.71□□□□□ -0.86
VPS26A-206ENST00000489794 LDHBP07195 334 aaKnown RBP9.71□□□□□ -0.86
VPS26A-206ENST00000489794 MAP3K10Q02779 954 aa9.71□□□□□ -0.86
VPS26A-206ENST00000489794 FBXO33Q7Z6M2 555 aa9.71□□□□□ -0.86
VPS26A-206ENST00000489794 GALNT12Q8IXK2 581 aa9.71□□□□□ -0.86
VPS26A-206ENST00000489794 FRMD6Q96NE9 622 aa9.71□□□□□ -0.86
VPS26A-206ENST00000489794 EDARADDQ8WWZ3 215 aa9.7□□□□□ -0.86
VPS26A-206ENST00000489794 CCDC74AQ96AQ1 378 aa9.7□□□□□ -0.86
VPS26A-206ENST00000489794 NLRP2Q9NX02 1062 aa9.7□□□□□ -0.86
VPS26A-206ENST00000489794 FRRS1LQ9P0K9 344 aa9.7□□□□□ -0.86
VPS26A-206ENST00000489794 CYP2E1P05181 493 aaPredicted RBP9.69□□□□□ -0.86
VPS26A-206ENST00000489794 KCNMA1Q12791 1236 aa9.69□□□□□ -0.86
VPS26A-206ENST00000489794 FAM35AQ86V20 835 aa9.69□□□□□ -0.86
VPS26A-206ENST00000489794 GALNT6Q8NCL4 622 aa9.69□□□□□ -0.86
VPS26A-206ENST00000489794 NSUN5Q96P11 429 aaKnown RBP9.69□□□□□ -0.86
VPS26A-206ENST00000489794 KANSL3Q9P2N6 904 aa9.69□□□□□ -0.86
VPS26A-206ENST00000489794 RBM47A0AV96 593 aaKnown RBP9.68□□□□□ -0.86
VPS26A-206ENST00000489794 ZBTB42B2RXF5 422 aa9.68□□□□□ -0.86
VPS26A-206ENST00000489794 GIPC1O14908 333 aa9.68□□□□□ -0.86
VPS26A-206ENST00000489794 CELA2BP08218 269 aaPredicted RBP9.68□□□□□ -0.86
VPS26A-206ENST00000489794 EIF2AK2P19525 551 aaKnown RBP9.68□□□□□ -0.86
VPS26A-206ENST00000489794 SVOPQ8N4V2 548 aa9.68□□□□□ -0.86
VPS26A-206ENST00000489794 ADAMTS8Q9UP79 889 aa9.68□□□□□ -0.86
VPS26A-206ENST00000489794 ZNF385CQ66K41 422 aaPredicted RBP9.67□□□□□ -0.86
VPS26A-206ENST00000489794 ELMSAN1Q6PJG2 1045 aa9.67□□□□□ -0.86
VPS26A-206ENST00000489794 CACTIN-AS1Q8N1I8 211 aa9.67□□□□□ -0.86
VPS26A-206ENST00000489794 MICALL1Q8N3F8 863 aa9.67□□□□□ -0.86
VPS26A-206ENST00000489794 CEP120Q8N960 986 aa9.67□□□□□ -0.86
VPS26A-206ENST00000489794 TTC9Q92623 222 aa9.67□□□□□ -0.86
VPS26A-206ENST00000489794 SPG7Q9UQ90 795 aa9.67□□□□□ -0.86
VPS26A-206ENST00000489794 RNF225M0QZC1 329 aaPredicted RBP9.66□□□□□ -0.86
VPS26A-206ENST00000489794 CPB1P15086 417 aa9.66□□□□□ -0.86
VPS26A-206ENST00000489794 MLLT1Q03111 559 aaPredicted RBP9.66□□□□□ -0.86
VPS26A-206ENST00000489794 KIAA0319Q5VV43 1072 aa9.66□□□□□ -0.86
VPS26A-206ENST00000489794 USPL1Q5W0Q7 1092 aa9.66□□□□□ -0.86
VPS26A-206ENST00000489794 GIPC2Q8TF65 315 aa9.66□□□□□ -0.86
VPS26A-206ENST00000489794 SRCIN1Q9C0H9 1055 aa9.66□□□□□ -0.86
VPS26A-206ENST00000489794 PPP4R2Q9NY27 417 aa9.66□□□□□ -0.86
VPS26A-206ENST00000489794 TRAK1Q9UPV9 953 aa9.66□□□□□ -0.86
VPS26A-206ENST00000489794 SMNDC1O75940 238 aaKnown RBP eCLIP9.65□□□□□ -0.86
VPS26A-206ENST00000489794 COL13A1Q5TAT6 717 aaPredicted RBP9.65□□□□□ -0.86
VPS26A-206ENST00000489794 LYPD4Q6UWN0 246 aa9.65□□□□□ -0.86
VPS26A-206ENST00000489794 RGS9O75916 674 aaPredicted RBP9.64□□□□□ -0.87
VPS26A-206ENST00000489794 AMPD1P23109 780 aa9.64□□□□□ -0.87
VPS26A-206ENST00000489794 XPCQ01831 940 aaPredicted RBP9.64□□□□□ -0.87
VPS26A-206ENST00000489794 HFE2Q6ZVN8 426 aa9.64□□□□□ -0.87
VPS26A-206ENST00000489794 CHSY3Q70JA7 882 aa9.64□□□□□ -0.87
VPS26A-206ENST00000489794 PLD4Q96BZ4 506 aa9.64□□□□□ -0.87
VPS26A-206ENST00000489794 BTBD6Q96KE9 485 aa9.64□□□□□ -0.87
VPS26A-206ENST00000489794 PBX4Q9BYU1 374 aa9.64□□□□□ -0.87
VPS26A-206ENST00000489794 NPHS2Q9NP85 383 aa9.64□□□□□ -0.87
VPS26A-206ENST00000489794 FAM177BA6PVY3 158 aa9.63□□□□□ -0.87
VPS26A-206ENST00000489794 J3QW42 95 aa9.63□□□□□ -0.87
VPS26A-206ENST00000489794 GADD45BO75293 160 aaPredicted RBP9.63□□□□□ -0.87
VPS26A-206ENST00000489794 POLR3DP05423 398 aaPredicted RBP9.63□□□□□ -0.87
VPS26A-206ENST00000489794 PERM1Q5SV97 790 aa9.63□□□□□ -0.87
VPS26A-206ENST00000489794 PSAPL1Q6NUJ1 521 aa9.63□□□□□ -0.87
VPS26A-206ENST00000489794 TMEM102Q8N9M5 508 aaPredicted RBP9.63□□□□□ -0.87
VPS26A-206ENST00000489794 OSMRQ99650 979 aa9.63□□□□□ -0.87
VPS26A-206ENST00000489794 SUV39H2Q9H5I1 410 aa9.63□□□□□ -0.87
VPS26A-206ENST00000489794 PRDM6Q9NQX0 595 aa9.63□□□□□ -0.87
VPS26A-206ENST00000489794 DZANK1Q9NVP4 752 aa9.63□□□□□ -0.87
VPS26A-206ENST00000489794 PIK3R2O00459 728 aa9.62□□□□□ -0.87
VPS26A-206ENST00000489794 ZNF16P17020 682 aaPredicted RBP9.62□□□□□ -0.87
VPS26A-206ENST00000489794 GNA15P30679 374 aa9.62□□□□□ -0.87
VPS26A-206ENST00000489794 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.62□□□□□ -0.87
VPS26A-206ENST00000489794 PEAR1Q5VY43 1037 aaPredicted RBP9.62□□□□□ -0.87
VPS26A-206ENST00000489794 C1orf229Q6ZS94 237 aaPredicted RBP9.62□□□□□ -0.87
VPS26A-206ENST00000489794 TMEM151AQ8N4L1 468 aa9.62□□□□□ -0.87
VPS26A-206ENST00000489794 WHAMMQ8TF30 809 aa9.62□□□□□ -0.87
VPS26A-206ENST00000489794 LPIN3Q9BQK8 851 aa9.62□□□□□ -0.87
VPS26A-206ENST00000489794 SMG9Q9H0W8 520 aaKnown RBP9.62□□□□□ -0.87
VPS26A-206ENST00000489794 EHD4Q9H223 541 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms