RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 C1QTNF8P60827 252 aa21.81■■□□□ 1.08
MDC1-206ENST00000489540 INTS3Q68E01 1043 aaKnown RBP21.81■■□□□ 1.08
MDC1-206ENST00000489540 GPC2Q8N158 579 aa21.81■■□□□ 1.08
MDC1-206ENST00000489540 ZC3H12CQ9C0D7 883 aaKnown RBP21.81■■□□□ 1.08
MDC1-206ENST00000489540 COL4A1P02462 1669 aa21.81■■□□□ 1.08
MDC1-206ENST00000489540 TOMM70O94826 608 aa21.8■■□□□ 1.08
MDC1-206ENST00000489540 UFL1O94874 794 aa21.8■■□□□ 1.08
MDC1-206ENST00000489540 TRIM27P14373 513 aa21.8■■□□□ 1.08
MDC1-206ENST00000489540 RABL6Q3YEC7 729 aaPredicted RBP21.8■■□□□ 1.08
MDC1-206ENST00000489540 ZKSCAN2Q63HK3 967 aa21.8■■□□□ 1.08
MDC1-206ENST00000489540 L3MBTL3Q96JM7 780 aaPredicted RBP21.8■■□□□ 1.08
MDC1-206ENST00000489540 ANKRD2Q9GZV1 360 aa21.8■■□□□ 1.08
MDC1-206ENST00000489540 BICC1Q9H694 974 aaKnown RBP21.8■■□□□ 1.08
MDC1-206ENST00000489540 RIMBP2O15034 1052 aa21.8■■□□□ 1.08
MDC1-206ENST00000489540 TAF7LQ5H9L4 462 aa21.8■■□□□ 1.08
MDC1-206ENST00000489540 TAF1P21675 1872 aa21.79■■□□□ 1.08
MDC1-206ENST00000489540 CCDC88AQ3V6T2 1871 aa21.79■■□□□ 1.08
MDC1-206ENST00000489540 DICER1Q9UPY3 1922 aaKnown RBP21.79■■□□□ 1.08
MDC1-206ENST00000489540 POTECB2RU33 542 aa21.79■■□□□ 1.08
MDC1-206ENST00000489540 UBTFL1P0CB47 393 aaPredicted RBP21.79■■□□□ 1.08
MDC1-206ENST00000489540 LEMD3Q9Y2U8 911 aa21.79■■□□□ 1.08
MDC1-206ENST00000489540 IQCA1LA6NCM1 817 aa21.78■■□□□ 1.08
MDC1-206ENST00000489540 LDHAL6AQ6ZMR3 332 aa21.78■■□□□ 1.08
MDC1-206ENST00000489540 LRRC37AA6NMS7 1700 aa21.78■■□□□ 1.08
MDC1-206ENST00000489540 TIAM2Q8IVF5 1701 aa21.77■■□□□ 1.08
MDC1-206ENST00000489540 ANKRD44Q8N8A2 993 aa21.77■■□□□ 1.08
MDC1-206ENST00000489540 GJA3Q9Y6H8 435 aa21.77■■□□□ 1.08
MDC1-206ENST00000489540 COL4A5P29400 1685 aa21.76■■□□□ 1.07
MDC1-206ENST00000489540 G3V3G9 751 aa21.76■■□□□ 1.07
MDC1-206ENST00000489540 CHRNDQ07001 517 aa21.76■■□□□ 1.07
MDC1-206ENST00000489540 CXCL9Q07325 125 aa21.76■■□□□ 1.07
MDC1-206ENST00000489540 TNIP1Q15025 636 aa21.76■■□□□ 1.07
MDC1-206ENST00000489540 DCAF8Q5TAQ9 597 aa21.76■■□□□ 1.07
MDC1-206ENST00000489540 RBM46Q8TBY0 533 aaKnown RBP21.76■■□□□ 1.07
MDC1-206ENST00000489540 DUOX1Q9NRD9 1551 aa21.76■■□□□ 1.07
MDC1-206ENST00000489540 GNAI3P08754 354 aa21.75■■□□□ 1.07
MDC1-206ENST00000489540 CIAPIN1Q6FI81 312 aa21.75■■□□□ 1.07
MDC1-206ENST00000489540 CLUAP1Q96AJ1 413 aa21.75■■□□□ 1.07
MDC1-206ENST00000489540 ZNF594Q96JF6 807 aaPredicted RBP21.75■■□□□ 1.07
MDC1-206ENST00000489540 GPR101Q96P66 508 aaPredicted RBP21.75■■□□□ 1.07
MDC1-206ENST00000489540 CNNM1Q9NRU3 951 aa21.75■■□□□ 1.07
MDC1-206ENST00000489540 MYH3P11055 1940 aa21.74■■□□□ 1.07
MDC1-206ENST00000489540 DOK7Q18PE1 504 aa21.74■■□□□ 1.07
MDC1-206ENST00000489540 DBNDD1Q9H9R9 158 aa21.74■■□□□ 1.07
MDC1-206ENST00000489540 HACL1Q9UJ83 578 aa21.74■■□□□ 1.07
MDC1-206ENST00000489540 ECE2O60344 883 aa21.73■■□□□ 1.07
MDC1-206ENST00000489540 ZNF804BA4D1E1 1349 aa21.73■■□□□ 1.07
MDC1-206ENST00000489540 YDJCA8MPS7 323 aa21.72■■□□□ 1.07
MDC1-206ENST00000489540 RAD17O75943 681 aa21.72■■□□□ 1.07
MDC1-206ENST00000489540 LMOD1P29536 600 aaPredicted RBP21.72■■□□□ 1.07
MDC1-206ENST00000489540 KCNJ4P48050 445 aa21.72■■□□□ 1.07
MDC1-206ENST00000489540 FTSJ3Q8IY81 847 aaKnown RBP21.72■■□□□ 1.07
MDC1-206ENST00000489540 MEIS3Q99687 375 aa21.72■■□□□ 1.07
MDC1-206ENST00000489540 TAF1DQ9H5J8 278 aaPredicted RBP21.72■■□□□ 1.07
MDC1-206ENST00000489540 TNNQ9UQP3 1299 aa21.72■■□□□ 1.07
MDC1-206ENST00000489540 WDR90Q96KV7 1748 aa21.72■■□□□ 1.07
MDC1-206ENST00000489540 FSTL1Q12841 308 aa21.72■■□□□ 1.07
MDC1-206ENST00000489540 DZIP1LQ8IYY4 767 aaKnown RBP21.72■■□□□ 1.07
MDC1-206ENST00000489540 MED23Q9ULK4 1368 aa21.71■■□□□ 1.07
MDC1-206ENST00000489540 WTIPA6NIX2 430 aaPredicted RBP21.71■■□□□ 1.07
MDC1-206ENST00000489540 PODNQ7Z5L7 613 aa21.71■■□□□ 1.07
MDC1-206ENST00000489540 TMEM57Q8N5G2 664 aa21.71■■□□□ 1.07
MDC1-206ENST00000489540 SMC1BQ8NDV3 1235 aa21.71■■□□□ 1.07
MDC1-206ENST00000489540 RCAN3Q9UKA8 241 aa21.71■■□□□ 1.07
MDC1-206ENST00000489540 LRRFIP2Q9Y608 721 aaKnown RBP21.71■■□□□ 1.07
MDC1-206ENST00000489540 TAF5LO75529 589 aa21.7■■□□□ 1.06
MDC1-206ENST00000489540 EPHX2P34913 555 aa21.7■■□□□ 1.06
MDC1-206ENST00000489540 PNMA8AQ86V59 439 aaPredicted RBP21.7■■□□□ 1.06
MDC1-206ENST00000489540 HELBQ8NG08 1087 aaPredicted RBP21.7■■□□□ 1.06
MDC1-206ENST00000489540 RIPOR2Q9Y4F9 1068 aa21.7■■□□□ 1.06
MDC1-206ENST00000489540 LTBP1Q14766 1721 aa21.69■■□□□ 1.06
MDC1-206ENST00000489540 MS4A1P11836 297 aa21.69■■□□□ 1.06
MDC1-206ENST00000489540 SCNN1DP51172 638 aa21.69■■□□□ 1.06
MDC1-206ENST00000489540 PUS3Q9BZE2 481 aaKnown RBP21.69■■□□□ 1.06
MDC1-206ENST00000489540 COA1Q9GZY4 146 aa21.69■■□□□ 1.06
MDC1-206ENST00000489540 MROH5Q6ZUA9 1318 aa21.69■■□□□ 1.06
MDC1-206ENST00000489540 PSMD14O00487 310 aa21.68■■□□□ 1.06
MDC1-206ENST00000489540 PLIN1O60240 522 aa21.68■■□□□ 1.06
MDC1-206ENST00000489540 GMPSP49915 693 aaPredicted RBP21.68■■□□□ 1.06
MDC1-206ENST00000489540 C15orf52Q6ZUT6 534 aaKnown RBP21.68■■□□□ 1.06
MDC1-206ENST00000489540 GNAI2P04899 355 aa21.67■■□□□ 1.06
MDC1-206ENST00000489540 RFX5P48382 616 aaPredicted RBP21.67■■□□□ 1.06
MDC1-206ENST00000489540 KCNQ5Q9NR82 932 aa21.67■■□□□ 1.06
MDC1-206ENST00000489540 GPRC5DQ9NZD1 345 aa21.67■■□□□ 1.06
MDC1-206ENST00000489540 VIL1P09327 827 aaKnown RBP21.66■■□□□ 1.06
MDC1-206ENST00000489540 RPS12P25398 132 aaKnown RBP21.66■■□□□ 1.06
MDC1-206ENST00000489540 EPS15P42566 896 aa21.66■■□□□ 1.06
MDC1-206ENST00000489540 TXNRD3Q86VQ6 643 aa21.66■■□□□ 1.06
MDC1-206ENST00000489540 LDHDQ86WU2 507 aa21.66■■□□□ 1.06
MDC1-206ENST00000489540 DPF2Q92785 391 aa21.66■■□□□ 1.06
MDC1-206ENST00000489540 PTPN12Q05209 780 aaKnown RBP21.65■■□□□ 1.06
MDC1-206ENST00000489540 UBE4AQ14139 1066 aa21.65■■□□□ 1.06
MDC1-206ENST00000489540 LRRC24Q50LG9 513 aa21.65■■□□□ 1.06
MDC1-206ENST00000489540 EAPPQ56P03 285 aaPredicted RBP21.65■■□□□ 1.06
MDC1-206ENST00000489540 KLHDC4Q8TBB5 520 aa21.65■■□□□ 1.06
MDC1-206ENST00000489540 FBXO3Q9UK99 471 aa21.65■■□□□ 1.06
MDC1-206ENST00000489540 USP17L3A6NCW0 530 aa21.64■■□□□ 1.06
MDC1-206ENST00000489540 USP17L4A6NCW7 530 aa21.64■■□□□ 1.06
MDC1-206ENST00000489540 SNAP23O00161 211 aa21.64■■□□□ 1.06
MDC1-206ENST00000489540 EYA2O00167 538 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms