RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 HSP90AB1P08238 724 aaKnown RBP12.01□□□□□ -0.49
TNRC6B-208ENST00000489500 IFNL2Q8IZJ0 200 aa12.01□□□□□ -0.49
TNRC6B-208ENST00000489500 PDGFDQ9GZP0 370 aaPredicted RBP12.01□□□□□ -0.49
TNRC6B-208ENST00000489500 CHD4Q14839 1912 aa12□□□□□ -0.49
TNRC6B-208ENST00000489500 ARID5BQ14865 1188 aa12□□□□□ -0.49
TNRC6B-208ENST00000489500 AGERQ15109 404 aa12□□□□□ -0.49
TNRC6B-208ENST00000489500 ZNF827Q17R98 1081 aa12□□□□□ -0.49
TNRC6B-208ENST00000489500 LCE2CQ5TA81 110 aa12□□□□□ -0.49
TNRC6B-208ENST00000489500 HELBQ8NG08 1087 aaPredicted RBP12□□□□□ -0.49
TNRC6B-208ENST00000489500 SYT17Q9BSW7 474 aa12□□□□□ -0.49
TNRC6B-208ENST00000489500 FHDC1Q9C0D6 1143 aaPredicted RBP12□□□□□ -0.49
TNRC6B-208ENST00000489500 TMOD3Q9NYL9 352 aa12□□□□□ -0.49
TNRC6B-208ENST00000489500 C5P01031 1676 aa12□□□□□ -0.49
TNRC6B-208ENST00000489500 PLEKHO1Q53GL0 409 aaPredicted RBP11.99□□□□□ -0.49
TNRC6B-208ENST00000489500 CDK15Q96Q40 435 aa11.99□□□□□ -0.49
TNRC6B-208ENST00000489500 KDM4CQ9H3R0 1056 aa11.99□□□□□ -0.49
TNRC6B-208ENST00000489500 PALLDQ8WX93 1383 aa11.99□□□□□ -0.49
TNRC6B-208ENST00000489500 TAF1LQ8IZX4 1826 aa11.99□□□□□ -0.49
TNRC6B-208ENST00000489500 TUBGCP6Q96RT7 1819 aa11.99□□□□□ -0.49
TNRC6B-208ENST00000489500 PNPLA7Q6ZV29 1317 aa11.98□□□□□ -0.49
TNRC6B-208ENST00000489500 CYP27B1O15528 508 aa11.98□□□□□ -0.49
TNRC6B-208ENST00000489500 ADH1CP00326 375 aa11.98□□□□□ -0.49
TNRC6B-208ENST00000489500 TIMP2P16035 220 aa11.98□□□□□ -0.49
TNRC6B-208ENST00000489500 CTDSPL2Q05D32 466 aa11.98□□□□□ -0.49
TNRC6B-208ENST00000489500 AMOTQ4VCS5 1084 aa11.98□□□□□ -0.49
TNRC6B-208ENST00000489500 KLF16Q9BXK1 252 aaPredicted RBP11.98□□□□□ -0.49
TNRC6B-208ENST00000489500 FAM117AQ9C073 453 aa11.98□□□□□ -0.49
TNRC6B-208ENST00000489500 NCAPD2Q15021 1401 aa11.97□□□□□ -0.49
TNRC6B-208ENST00000489500 MAP3K5Q99683 1374 aa11.97□□□□□ -0.49
TNRC6B-208ENST00000489500 TERTO14746 1132 aaKnown RBP11.97□□□□□ -0.49
TNRC6B-208ENST00000489500 WDR4P57081 412 aaKnown RBP11.97□□□□□ -0.49
TNRC6B-208ENST00000489500 EIF4A2Q14240 407 aaKnown RBP11.97□□□□□ -0.49
TNRC6B-208ENST00000489500 BPHLQ86WA6 291 aaPredicted RBP11.97□□□□□ -0.49
TNRC6B-208ENST00000489500 PHKG2P15735 406 aa11.96□□□□□ -0.49
TNRC6B-208ENST00000489500 KCNQ4P56696 695 aa11.96□□□□□ -0.49
TNRC6B-208ENST00000489500 GPR162Q16538 588 aa11.96□□□□□ -0.49
TNRC6B-208ENST00000489500 C1orf141Q5JVX7 400 aa11.96□□□□□ -0.49
TNRC6B-208ENST00000489500 PROCA1Q8NCQ7 364 aaPredicted RBP11.96□□□□□ -0.49
TNRC6B-208ENST00000489500 COL24A1Q17RW2 1714 aa11.95□□□□□ -0.5
TNRC6B-208ENST00000489500 GRM5P41594 1212 aa11.95□□□□□ -0.5
TNRC6B-208ENST00000489500 SKIV2LQ15477 1246 aaKnown RBP11.95□□□□□ -0.5
TNRC6B-208ENST00000489500 ARMC2Q8NEN0 867 aa11.95□□□□□ -0.5
TNRC6B-208ENST00000489500 PIGBQ92521 554 aa11.95□□□□□ -0.5
TNRC6B-208ENST00000489500 ZFP42Q96MM3 310 aa11.95□□□□□ -0.5
TNRC6B-208ENST00000489500 TOGARAM1Q9Y4F4 1720 aa11.94□□□□□ -0.5
TNRC6B-208ENST00000489500 IGSF1Q8N6C5 1336 aa11.94□□□□□ -0.5
TNRC6B-208ENST00000489500 ERVV-2B6SEH9 535 aa11.94□□□□□ -0.5
TNRC6B-208ENST00000489500 NR3C2P08235 984 aa11.94□□□□□ -0.5
TNRC6B-208ENST00000489500 SH3RF1Q7Z6J0 888 aa11.94□□□□□ -0.5
TNRC6B-208ENST00000489500 DCAF5Q96JK2 942 aa11.94□□□□□ -0.5
TNRC6B-208ENST00000489500 C4BP0C0L5 1744 aa11.94□□□□□ -0.5
TNRC6B-208ENST00000489500 LOC102724428A0A0B4J2F2 783 aa11.93□□□□□ -0.5
TNRC6B-208ENST00000489500 SIK1P57059 783 aa11.93□□□□□ -0.5
TNRC6B-208ENST00000489500 CABP4P57796 275 aa11.93□□□□□ -0.5
TNRC6B-208ENST00000489500 COL23A1Q86Y22 540 aaPredicted RBP11.93□□□□□ -0.5
TNRC6B-208ENST00000489500 C1QTNF2Q9BXJ5 285 aa11.93□□□□□ -0.5
TNRC6B-208ENST00000489500 ZFAND3Q9H8U3 227 aa11.93□□□□□ -0.5
TNRC6B-208ENST00000489500 MTHFSP49914 203 aa11.92□□□□□ -0.5
TNRC6B-208ENST00000489500 SH3D19Q5HYK7 790 aa11.92□□□□□ -0.5
TNRC6B-208ENST00000489500 MRPL14Q6P1L8 145 aaKnown RBP11.92□□□□□ -0.5
TNRC6B-208ENST00000489500 ZNF530Q6P9A1 599 aaPredicted RBP11.92□□□□□ -0.5
TNRC6B-208ENST00000489500 SH3BP5LQ7L8J4 393 aa11.92□□□□□ -0.5
TNRC6B-208ENST00000489500 LRRN4Q8WUT4 740 aa11.92□□□□□ -0.5
TNRC6B-208ENST00000489500 GRIN3BO60391 1043 aa11.91□□□□□ -0.5
TNRC6B-208ENST00000489500 ZIC2O95409 532 aaPredicted RBP11.91□□□□□ -0.5
TNRC6B-208ENST00000489500 SSFA2P28290 1259 aa11.91□□□□□ -0.5
TNRC6B-208ENST00000489500 NR5A1Q13285 461 aa11.91□□□□□ -0.5
TNRC6B-208ENST00000489500 ITPKCQ96DU7 683 aa11.91□□□□□ -0.5
TNRC6B-208ENST00000489500 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.91□□□□□ -0.5
TNRC6B-208ENST00000489500 UBR3Q6ZT12 1888 aa11.91□□□□□ -0.5
TNRC6B-208ENST00000489500 KIF7Q2M1P5 1343 aa11.9□□□□□ -0.5
TNRC6B-208ENST00000489500 MAGEB6P1A0A0J9YX57 407 aa11.9□□□□□ -0.5
TNRC6B-208ENST00000489500 SULT6B1Q6IMI4 303 aa11.9□□□□□ -0.5
TNRC6B-208ENST00000489500 PURBQ96QR8 312 aaKnown RBP11.9□□□□□ -0.5
TNRC6B-208ENST00000489500 MSL1Q68DK7 614 aa11.89□□□□□ -0.51
TNRC6B-208ENST00000489500 DDRGK1Q96HY6 314 aa11.89□□□□□ -0.51
TNRC6B-208ENST00000489500 ASAP1Q9ULH1 1129 aa11.89□□□□□ -0.51
TNRC6B-208ENST00000489500 RTCBQ9Y3I0 505 aaKnown RBP11.89□□□□□ -0.51
TNRC6B-208ENST00000489500 CD2APQ9Y5K6 639 aa11.89□□□□□ -0.51
TNRC6B-208ENST00000489500 ZNF831Q5JPB2 1677 aa11.88□□□□□ -0.51
TNRC6B-208ENST00000489500 TRAPPC3LQ5T215 181 aa11.88□□□□□ -0.51
TNRC6B-208ENST00000489500 ATG3Q9NT62 314 aa11.88□□□□□ -0.51
TNRC6B-208ENST00000489500 NXF1Q9UBU9 619 aaKnown RBP11.88□□□□□ -0.51
TNRC6B-208ENST00000489500 WIPF1O43516 503 aa11.87□□□□□ -0.51
TNRC6B-208ENST00000489500 DIAPH1O60610 1272 aaKnown RBP11.87□□□□□ -0.51
TNRC6B-208ENST00000489500 SCARF1Q14162 830 aa11.87□□□□□ -0.51
TNRC6B-208ENST00000489500 AKAP4Q5JQC9 854 aa11.87□□□□□ -0.51
TNRC6B-208ENST00000489500 CC2D1BQ5T0F9 858 aaKnown RBP11.87□□□□□ -0.51
TNRC6B-208ENST00000489500 VIRMAQ69YN4 1812 aaKnown RBP11.87□□□□□ -0.51
TNRC6B-208ENST00000489500 SCN11AQ9UI33 1791 aa11.87□□□□□ -0.51
TNRC6B-208ENST00000489500 SOBPA7XYQ1 873 aa11.86□□□□□ -0.51
TNRC6B-208ENST00000489500 IL13P35225 146 aa11.86□□□□□ -0.51
TNRC6B-208ENST00000489500 VEGFBP49765 207 aa11.86□□□□□ -0.51
TNRC6B-208ENST00000489500 PPP2R2DQ66LE6 453 aa11.86□□□□□ -0.51
TNRC6B-208ENST00000489500 TRMT44Q8IYL2 757 aaKnown RBP11.86□□□□□ -0.51
TNRC6B-208ENST00000489500 NLGN1Q8N2Q7 840 aa11.86□□□□□ -0.51
TNRC6B-208ENST00000489500 LINC00116Q8NCU8 138 aa11.86□□□□□ -0.51
TNRC6B-208ENST00000489500 CFAP53Q96M91 514 aa11.86□□□□□ -0.51
TNRC6B-208ENST00000489500 KDRP35968 1356 aa11.85□□□□□ -0.51
TNRC6B-208ENST00000489500 NPC1L1Q9UHC9 1359 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms