RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 PRIMPOLQ96LW4 560 aa6.44□□□□□ -1.38
CD46-215ENST00000488596 NSUN5Q96P11 429 aaKnown RBP6.44□□□□□ -1.38
CD46-215ENST00000488596 ARID4AP29374 1257 aaPredicted RBP6.43□□□□□ -1.38
CD46-215ENST00000488596 GDF6Q6KF10 455 aaPredicted RBP6.43□□□□□ -1.38
CD46-215ENST00000488596 ETFBKMTQ8IXQ9 262 aa6.43□□□□□ -1.38
CD46-215ENST00000488596 SAP130Q9H0E3 1048 aa6.43□□□□□ -1.38
CD46-215ENST00000488596 ZNF777Q9ULD5 760 aaPredicted RBP6.43□□□□□ -1.38
CD46-215ENST00000488596 PSAPP07602 524 aa6.42□□□□□ -1.38
CD46-215ENST00000488596 RFX1P22670 979 aa6.42□□□□□ -1.38
CD46-215ENST00000488596 FAM26DQ5JW98 314 aa6.42□□□□□ -1.38
CD46-215ENST00000488596 PRR23CQ6ZRP0 262 aa6.42□□□□□ -1.38
CD46-215ENST00000488596 SLC51AQ86UW1 340 aa6.42□□□□□ -1.38
CD46-215ENST00000488596 DZIP1LQ8IYY4 767 aaKnown RBP6.42□□□□□ -1.38
CD46-215ENST00000488596 IL22RA1Q8N6P7 574 aa6.42□□□□□ -1.38
CD46-215ENST00000488596 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.42□□□□□ -1.38
CD46-215ENST00000488596 NOVA2Q9UNW9 492 aaKnown RBP6.42□□□□□ -1.38
CD46-215ENST00000488596 C1orf115Q9H7X2 142 aa6.41□□□□□ -1.38
CD46-215ENST00000488596 AKTIPQ9H8T0 292 aa6.41□□□□□ -1.38
CD46-215ENST00000488596 F8W735 103 aaPredicted RBP6.4□□□□□ -1.38
CD46-215ENST00000488596 PRMT3O60678 531 aa6.4□□□□□ -1.38
CD46-215ENST00000488596 GHRHP01286 108 aa6.4□□□□□ -1.38
CD46-215ENST00000488596 SOX18P35713 384 aa6.4□□□□□ -1.38
CD46-215ENST00000488596 SETDB1Q15047 1291 aa6.4□□□□□ -1.38
CD46-215ENST00000488596 TRIP4Q15650 581 aaPredicted RBP6.4□□□□□ -1.38
CD46-215ENST00000488596 OCLNQ16625 522 aa6.4□□□□□ -1.38
CD46-215ENST00000488596 TMEM130Q8N3G9 435 aa6.4□□□□□ -1.38
CD46-215ENST00000488596 TRIM33Q9UPN9 1127 aa6.4□□□□□ -1.38
CD46-215ENST00000488596 HOXD8P13378 290 aaPredicted RBP6.39□□□□□ -1.39
CD46-215ENST00000488596 FAM69CQ0P6D2 419 aa6.39□□□□□ -1.39
CD46-215ENST00000488596 CAPN12Q6ZSI9 719 aa6.39□□□□□ -1.39
CD46-215ENST00000488596 NLRP13Q86W25 1043 aa6.39□□□□□ -1.39
CD46-215ENST00000488596 MRPL18Q9H0U6 180 aaKnown RBP6.39□□□□□ -1.39
CD46-215ENST00000488596 PCMTD2Q9NV79 361 aa6.39□□□□□ -1.39
CD46-215ENST00000488596 ZMIZ1Q9ULJ6 1067 aa6.39□□□□□ -1.39
CD46-215ENST00000488596 IRAK1P51617 712 aa6.38□□□□□ -1.39
CD46-215ENST00000488596 FZD5Q13467 585 aa6.38□□□□□ -1.39
CD46-215ENST00000488596 SWI5Q1ZZU3 235 aa6.38□□□□□ -1.39
CD46-215ENST00000488596 COL13A1Q5TAT6 717 aaPredicted RBP6.38□□□□□ -1.39
CD46-215ENST00000488596 C16orf46Q6P387 395 aa6.38□□□□□ -1.39
CD46-215ENST00000488596 AGGF1Q8N302 714 aaeCLIP6.38□□□□□ -1.39
CD46-215ENST00000488596 ARID3AQ99856 593 aa6.38□□□□□ -1.39
CD46-215ENST00000488596 ACIN1Q9UKV3 1341 aaKnown RBP6.38□□□□□ -1.39
CD46-215ENST00000488596 TNFRSF10BO14763 440 aa6.37□□□□□ -1.39
CD46-215ENST00000488596 BRD2P25440 801 aaKnown RBP6.37□□□□□ -1.39
CD46-215ENST00000488596 GALNT11Q8NCW6 608 aa6.37□□□□□ -1.39
CD46-215ENST00000488596 STK32AQ8WU08 396 aa6.37□□□□□ -1.39
CD46-215ENST00000488596 RBSNQ9H1K0 784 aa6.37□□□□□ -1.39
CD46-215ENST00000488596 FSTP19883 344 aa6.36□□□□□ -1.39
CD46-215ENST00000488596 NAA30Q147X3 362 aaPredicted RBP6.36□□□□□ -1.39
CD46-215ENST00000488596 ADAMTSL4Q6UY14 1074 aa6.36□□□□□ -1.39
CD46-215ENST00000488596 Q6ZS46 218 aa6.36□□□□□ -1.39
CD46-215ENST00000488596 SRA1Q9HD15 236 aaKnown RBP6.36□□□□□ -1.39
CD46-215ENST00000488596 PPME1Q9Y570 386 aa6.36□□□□□ -1.39
CD46-215ENST00000488596 UBAP1LF5GYI3 381 aa6.35□□□□□ -1.39
CD46-215ENST00000488596 LINC01387J3KSC0 135 aa6.35□□□□□ -1.39
CD46-215ENST00000488596 SRPK2P78362 688 aaKnown RBP6.35□□□□□ -1.39
CD46-215ENST00000488596 ATP11AP98196 1134 aa6.35□□□□□ -1.39
CD46-215ENST00000488596 ELOAQ14241 798 aaKnown RBP6.35□□□□□ -1.39
CD46-215ENST00000488596 TXNDC11Q6PKC3 985 aa6.35□□□□□ -1.39
CD46-215ENST00000488596 MAP4K3Q8IVH8 894 aa6.35□□□□□ -1.39
CD46-215ENST00000488596 OR13H1Q8NG92 308 aa6.35□□□□□ -1.39
CD46-215ENST00000488596 UBL7Q96S82 380 aaPredicted RBP6.35□□□□□ -1.39
CD46-215ENST00000488596 MKNK1Q9BUB5 465 aa6.35□□□□□ -1.39
CD46-215ENST00000488596 TM4SF5O14894 197 aa6.34□□□□□ -1.39
CD46-215ENST00000488596 WISP1O95388 367 aa6.34□□□□□ -1.39
CD46-215ENST00000488596 GLB1P16278 677 aa6.34□□□□□ -1.39
CD46-215ENST00000488596 SSTR4P31391 388 aa6.34□□□□□ -1.39
CD46-215ENST00000488596 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.34□□□□□ -1.39
CD46-215ENST00000488596 PIK3R5Q8WYR1 880 aa6.34□□□□□ -1.39
CD46-215ENST00000488596 COL26A1Q96A83 441 aa6.34□□□□□ -1.39
CD46-215ENST00000488596 KRTAP4-9Q9BYQ8 210 aa6.34□□□□□ -1.39
CD46-215ENST00000488596 LACRTQ9GZZ8 138 aa6.34□□□□□ -1.39
CD46-215ENST00000488596 KCNK4Q9NYG8 393 aa6.34□□□□□ -1.39
CD46-215ENST00000488596 CXXC1Q9P0U4 656 aaPredicted RBP6.34□□□□□ -1.39
CD46-215ENST00000488596 ZBTB39O15060 712 aa6.33□□□□□ -1.4
CD46-215ENST00000488596 CD97P48960 835 aa6.33□□□□□ -1.4
CD46-215ENST00000488596 CEP135Q66GS9 1140 aa6.33□□□□□ -1.4
CD46-215ENST00000488596 CACTIN-AS1Q8N1I8 211 aa6.33□□□□□ -1.4
CD46-215ENST00000488596 MUC3BQ9H195 1237 aa6.33□□□□□ -1.4
CD46-215ENST00000488596 MED26O95402 600 aa6.32□□□□□ -1.4
CD46-215ENST00000488596 CYP2E1P05181 493 aaPredicted RBP6.32□□□□□ -1.4
CD46-215ENST00000488596 CDC25BP30305 580 aa6.32□□□□□ -1.4
CD46-215ENST00000488596 ZAP70P43403 619 aa6.32□□□□□ -1.4
CD46-215ENST00000488596 HYAL2Q12891 473 aa6.32□□□□□ -1.4
CD46-215ENST00000488596 ARMC10Q8N2F6 343 aa6.32□□□□□ -1.4
CD46-215ENST00000488596 CCDC82Q8N4S0 544 aa6.32□□□□□ -1.4
CD46-215ENST00000488596 GPR152Q8TDT2 470 aa6.32□□□□□ -1.4
CD46-215ENST00000488596 DCAF11Q8TEB1 546 aa6.32□□□□□ -1.4
CD46-215ENST00000488596 RASSF4Q9H2L5 321 aa6.32□□□□□ -1.4
CD46-215ENST00000488596 RAXQ9Y2V3 346 aa6.32□□□□□ -1.4
CD46-215ENST00000488596 RNF114Q9Y508 228 aa6.32□□□□□ -1.4
CD46-215ENST00000488596 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.31□□□□□ -1.4
CD46-215ENST00000488596 TAL1P17542 331 aaPredicted RBP6.31□□□□□ -1.4
CD46-215ENST00000488596 CD68P34810 354 aaPredicted RBP6.31□□□□□ -1.4
CD46-215ENST00000488596 SCNN1AP37088 669 aa6.31□□□□□ -1.4
CD46-215ENST00000488596 TTC39BQ5VTQ0 682 aaPredicted RBP6.31□□□□□ -1.4
CD46-215ENST00000488596 SPACA7Q96KW9 195 aa6.31□□□□□ -1.4
CD46-215ENST00000488596 CARD10Q9BWT7 1032 aa6.31□□□□□ -1.4
CD46-215ENST00000488596 SMNDC1O75940 238 aaKnown RBP eCLIP6.3□□□□□ -1.4
CD46-215ENST00000488596 KIF4AO95239 1232 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms