RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 HEG1Q9ULI3 1381 aa7.25□□□□□ -1.25
COPS3-208ENST00000486032 C4AP0C0L4 1744 aa7.25□□□□□ -1.25
COPS3-208ENST00000486032 GDF11O95390 407 aa7.25□□□□□ -1.25
COPS3-208ENST00000486032 SNRPA1P09661 255 aaKnown RBP7.25□□□□□ -1.25
COPS3-208ENST00000486032 CANXP27824 592 aaKnown RBP7.25□□□□□ -1.25
COPS3-208ENST00000486032 VEGFBP49765 207 aa7.25□□□□□ -1.25
COPS3-208ENST00000486032 SLC15A2Q16348 729 aa7.25□□□□□ -1.25
COPS3-208ENST00000486032 TWISTNBQ3B726 338 aaPredicted RBP7.25□□□□□ -1.25
COPS3-208ENST00000486032 BABAM1Q9NWV8 329 aa7.25□□□□□ -1.25
COPS3-208ENST00000486032 ERBB4Q15303 1308 aa7.25□□□□□ -1.25
COPS3-208ENST00000486032 COL24A1Q17RW2 1714 aa7.24□□□□□ -1.25
COPS3-208ENST00000486032 CICQ96RK0 1608 aaPredicted RBP7.24□□□□□ -1.25
COPS3-208ENST00000486032 GIGYF1O75420 1035 aaPredicted RBP7.24□□□□□ -1.25
COPS3-208ENST00000486032 ANXA1P04083 346 aa7.24□□□□□ -1.25
COPS3-208ENST00000486032 A1BGP04217 495 aa7.24□□□□□ -1.25
COPS3-208ENST00000486032 CFHP08603 1231 aa7.24□□□□□ -1.25
COPS3-208ENST00000486032 MYL6BP14649 208 aa7.24□□□□□ -1.25
COPS3-208ENST00000486032 HDGFL1Q5TGJ6 251 aa7.24□□□□□ -1.25
COPS3-208ENST00000486032 SCUBE3Q8IX30 993 aa7.24□□□□□ -1.25
COPS3-208ENST00000486032 AK7Q96M32 723 aa7.24□□□□□ -1.25
COPS3-208ENST00000486032 SPSB2Q99619 263 aa7.24□□□□□ -1.25
COPS3-208ENST00000486032 KRTAP4-8Q9BYQ9 185 aa7.24□□□□□ -1.25
COPS3-208ENST00000486032 GRXCR2A6NFK2 248 aa7.23□□□□□ -1.25
COPS3-208ENST00000486032 STARD3NLO95772 234 aa7.23□□□□□ -1.25
COPS3-208ENST00000486032 CRKLP46109 303 aaKnown RBP7.23□□□□□ -1.25
COPS3-208ENST00000486032 SLC27A3Q5K4L6 730 aa7.23□□□□□ -1.25
COPS3-208ENST00000486032 MSL1Q68DK7 614 aa7.23□□□□□ -1.25
COPS3-208ENST00000486032 NPM2Q86SE8 214 aaKnown RBP7.23□□□□□ -1.25
COPS3-208ENST00000486032 COL23A1Q86Y22 540 aaPredicted RBP7.23□□□□□ -1.25
COPS3-208ENST00000486032 VSIG10Q8N0Z9 540 aa7.23□□□□□ -1.25
COPS3-208ENST00000486032 BCL2L13Q9BXK5 485 aa7.23□□□□□ -1.25
COPS3-208ENST00000486032 TEX13AQ9BXU3 409 aaPredicted RBP7.23□□□□□ -1.25
COPS3-208ENST00000486032 STK32BQ9NY57 414 aa7.23□□□□□ -1.25
COPS3-208ENST00000486032 ZBTB1Q9Y2K1 713 aa7.23□□□□□ -1.25
COPS3-208ENST00000486032 FCF1Q9Y324 198 aaKnown RBP7.23□□□□□ -1.25
COPS3-208ENST00000486032 J3QL48 77 aa7.22□□□□□ -1.25
COPS3-208ENST00000486032 WNT7AO00755 349 aa7.22□□□□□ -1.25
COPS3-208ENST00000486032 GNPATO15228 680 aa7.22□□□□□ -1.25
COPS3-208ENST00000486032 VAMP4O75379 141 aa7.22□□□□□ -1.25
COPS3-208ENST00000486032 CYP19A1P11511 503 aaPredicted RBP7.22□□□□□ -1.25
COPS3-208ENST00000486032 RASSF7Q02833 373 aa7.22□□□□□ -1.25
COPS3-208ENST00000486032 AIMP1Q12904 312 aaKnown RBP7.22□□□□□ -1.25
COPS3-208ENST00000486032 NBPF14Q5TI25 921 aa7.22□□□□□ -1.25
COPS3-208ENST00000486032 STK31Q9BXU1 1019 aa7.22□□□□□ -1.25
COPS3-208ENST00000486032 CCDC87Q9NVE4 849 aa7.22□□□□□ -1.25
COPS3-208ENST00000486032 TFCP2L1Q9NZI6 479 aa7.22□□□□□ -1.25
COPS3-208ENST00000486032 CHPF2Q9P2E5 772 aa7.22□□□□□ -1.25
COPS3-208ENST00000486032 ZNF831Q5JPB2 1677 aa7.22□□□□□ -1.25
COPS3-208ENST00000486032 ZBTB24O43167 697 aaPredicted RBP7.21□□□□□ -1.26
COPS3-208ENST00000486032 PROSER3Q2NL68 480 aa7.21□□□□□ -1.26
COPS3-208ENST00000486032 CCDC30Q5VVM6 783 aa7.21□□□□□ -1.26
COPS3-208ENST00000486032 TRMT2AQ8IZ69 625 aaKnown RBP7.21□□□□□ -1.26
COPS3-208ENST00000486032 HPS1Q92902 700 aa7.21□□□□□ -1.26
COPS3-208ENST00000486032 RTCBQ9Y3I0 505 aaKnown RBP7.21□□□□□ -1.26
COPS3-208ENST00000486032 HOXB7P09629 217 aa7.2□□□□□ -1.26
COPS3-208ENST00000486032 DNAJB2P25686 324 aa7.2□□□□□ -1.26
COPS3-208ENST00000486032 INTS5Q6P9B9 1019 aaKnown RBP7.2□□□□□ -1.26
COPS3-208ENST00000486032 PHAXQ9H814 394 aaKnown RBP7.2□□□□□ -1.26
COPS3-208ENST00000486032 SMC4Q9NTJ3 1288 aa7.2□□□□□ -1.26
COPS3-208ENST00000486032 SRP68Q9UHB9 627 aaKnown RBP7.2□□□□□ -1.26
COPS3-208ENST00000486032 TBC1D2BQ9UPU7 963 aa7.2□□□□□ -1.26
COPS3-208ENST00000486032 KIAA1551Q9HCM1 1747 aa7.2□□□□□ -1.26
COPS3-208ENST00000486032 CNTNAP4Q9C0A0 1308 aa7.2□□□□□ -1.26
COPS3-208ENST00000486032 LAMB4A4D0S4 1761 aa7.2□□□□□ -1.26
COPS3-208ENST00000486032 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.19□□□□□ -1.26
COPS3-208ENST00000486032 RPS6KA4O75676 772 aa7.19□□□□□ -1.26
COPS3-208ENST00000486032 BCAR3O75815 825 aa7.19□□□□□ -1.26
COPS3-208ENST00000486032 TRAPPC3LQ5T215 181 aa7.19□□□□□ -1.26
COPS3-208ENST00000486032 NBPF10Q6P3W6 841 aaKnown RBP7.19□□□□□ -1.26
COPS3-208ENST00000486032 COPS6Q7L5N1 327 aa7.19□□□□□ -1.26
COPS3-208ENST00000486032 G2E3Q7L622 706 aa7.19□□□□□ -1.26
COPS3-208ENST00000486032 DZIP3Q86Y13 1208 aaKnown RBP7.19□□□□□ -1.26
COPS3-208ENST00000486032 NBPF15Q8N660 670 aa7.19□□□□□ -1.26
COPS3-208ENST00000486032 XAGE3Q8WTP9 111 aa7.19□□□□□ -1.26
COPS3-208ENST00000486032 SSH1Q8WYL5 1049 aa7.19□□□□□ -1.26
COPS3-208ENST00000486032 FRAT1Q92837 279 aaPredicted RBP7.19□□□□□ -1.26
COPS3-208ENST00000486032 ZNF428Q96B54 188 aa7.19□□□□□ -1.26
COPS3-208ENST00000486032 ZBTB3Q9H5J0 574 aa7.19□□□□□ -1.26
COPS3-208ENST00000486032 DDX21Q9NR30 783 aaKnown RBP eCLIP7.19□□□□□ -1.26
COPS3-208ENST00000486032 DBF4Q9UBU7 674 aaPredicted RBP7.19□□□□□ -1.26
COPS3-208ENST00000486032 HMGB2P26583 209 aaKnown RBP7.18□□□□□ -1.26
COPS3-208ENST00000486032 RFC4P35249 363 aa7.18□□□□□ -1.26
COPS3-208ENST00000486032 IL6STP40189 918 aaPredicted RBP7.18□□□□□ -1.26
COPS3-208ENST00000486032 RARSP54136 660 aaKnown RBP7.18□□□□□ -1.26
COPS3-208ENST00000486032 FKBP5Q13451 457 aaPredicted RBP7.18□□□□□ -1.26
COPS3-208ENST00000486032 RC3H1Q5TC82 1133 aaKnown RBP7.18□□□□□ -1.26
COPS3-208ENST00000486032 USPL1Q5W0Q7 1092 aa7.18□□□□□ -1.26
COPS3-208ENST00000486032 KIF6Q6ZMV9 814 aa7.18□□□□□ -1.26
COPS3-208ENST00000486032 TTLL7Q6ZT98 887 aa7.18□□□□□ -1.26
COPS3-208ENST00000486032 RIC3Q7Z5B4 369 aa7.18□□□□□ -1.26
COPS3-208ENST00000486032 ARHGEF1Q92888 912 aaKnown RBP7.18□□□□□ -1.26
COPS3-208ENST00000486032 CHMP4AQ9BY43 222 aa7.18□□□□□ -1.26
COPS3-208ENST00000486032 RCAN3Q9UKA8 241 aa7.18□□□□□ -1.26
COPS3-208ENST00000486032 SOS1Q07889 1333 aaPredicted RBP7.18□□□□□ -1.26
COPS3-208ENST00000486032 COL15A1P39059 1388 aa7.18□□□□□ -1.26
COPS3-208ENST00000486032 A0A087WZG4 1122 aa7.17□□□□□ -1.26
COPS3-208ENST00000486032 FAM177BA6PVY3 158 aa7.17□□□□□ -1.26
COPS3-208ENST00000486032 RNF225M0QZC1 329 aaPredicted RBP7.17□□□□□ -1.26
COPS3-208ENST00000486032 OSBPP22059 807 aa7.17□□□□□ -1.26
COPS3-208ENST00000486032 EIF5P55010 431 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms