RNA–Protein interactions for RNA: ENST00000485499.1

PTPRT-208, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 3

Gene PTPRT, Length 208 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-208ENST00000485499 SLIT3O75094 1523 aa8.88□□□□□ -0.99
PTPRT-208ENST00000485499 BRD4O60885 1362 aaPredicted RBP8.87□□□□□ -0.99
PTPRT-208ENST00000485499 ABL2P42684 1182 aa8.87□□□□□ -0.99
PTPRT-208ENST00000485499 IRF5Q13568 498 aa8.87□□□□□ -0.99
PTPRT-208ENST00000485499 TRIM46Q7Z4K8 759 aa8.87□□□□□ -0.99
PTPRT-208ENST00000485499 TMEM151AQ8N4L1 468 aa8.87□□□□□ -0.99
PTPRT-208ENST00000485499 DNAJC5GQ8N7S2 189 aa8.87□□□□□ -0.99
PTPRT-208ENST00000485499 KIAA1210Q9ULL0 1709 aa8.87□□□□□ -0.99
PTPRT-208ENST00000485499 KIF13BQ9NQT8 1826 aa8.87□□□□□ -0.99
PTPRT-208ENST00000485499 USP19O94966 1318 aa8.86□□□□□ -0.99
PTPRT-208ENST00000485499 KIAA1551Q9HCM1 1747 aa8.86□□□□□ -0.99
PTPRT-208ENST00000485499 CCDC88AQ3V6T2 1871 aa8.86□□□□□ -0.99
PTPRT-208ENST00000485499 UBR3Q6ZT12 1888 aa8.86□□□□□ -0.99
PTPRT-208ENST00000485499 FSHRP23945 695 aa8.86□□□□□ -0.99
PTPRT-208ENST00000485499 CFAP70Q5T0N1 1121 aa8.86□□□□□ -0.99
PTPRT-208ENST00000485499 TOM1L2Q6ZVM7 507 aa8.86□□□□□ -0.99
PTPRT-208ENST00000485499 KCTD15Q96SI1 283 aaPredicted RBP8.86□□□□□ -0.99
PTPRT-208ENST00000485499 ARFGEF1Q9Y6D6 1849 aa8.86□□□□□ -0.99
PTPRT-208ENST00000485499 SBF1O95248 1867 aa8.85□□□□□ -0.99
PTPRT-208ENST00000485499 VSIG8P0DPA2 414 aa8.85□□□□□ -0.99
PTPRT-208ENST00000485499 EIF4G2P78344 907 aaKnown RBP eCLIP8.85□□□□□ -0.99
PTPRT-208ENST00000485499 C14orf93Q9H972 538 aaKnown RBP8.85□□□□□ -0.99
PTPRT-208ENST00000485499 PCDHB9Q9Y5E1 797 aa8.85□□□□□ -0.99
PTPRT-208ENST00000485499 RGPD2P0DJD1 1756 aa8.85□□□□□ -0.99
PTPRT-208ENST00000485499 FAM208AQ9UK61 1670 aaKnown RBP8.85□□□□□ -0.99
PTPRT-208ENST00000485499 PNPLA7Q6ZV29 1317 aa8.84□□□□□ -0.99
PTPRT-208ENST00000485499 WASLO00401 505 aaPredicted RBP8.84□□□□□ -0.99
PTPRT-208ENST00000485499 DHX9Q08211 1270 aaKnown RBP8.84□□□□□ -0.99
PTPRT-208ENST00000485499 CCDC116Q8IYX3 515 aa8.84□□□□□ -0.99
PTPRT-208ENST00000485499 ABTB2Q8N961 1025 aa8.84□□□□□ -0.99
PTPRT-208ENST00000485499 ACSBG1Q96GR2 724 aa8.84□□□□□ -0.99
PTPRT-208ENST00000485499 TOGARAM1Q9Y4F4 1720 aa8.84□□□□□ -0.99
PTPRT-208ENST00000485499 POLR3AO14802 1390 aaPredicted RBP8.84□□□□□ -0.99
PTPRT-208ENST00000485499 USP6P35125 1406 aa8.83□□□□□ -1
PTPRT-208ENST00000485499 SOX11P35716 441 aa8.83□□□□□ -1
PTPRT-208ENST00000485499 HTRA3P83110 453 aa8.83□□□□□ -1
PTPRT-208ENST00000485499 KLRG1Q96E93 195 aa8.83□□□□□ -1
PTPRT-208ENST00000485499 WWC3Q9ULE0 1092 aa8.83□□□□□ -1
PTPRT-208ENST00000485499 EMILIN1Q9Y6C2 1016 aa8.83□□□□□ -1
PTPRT-208ENST00000485499 WDR17Q8IZU2 1322 aa8.82□□□□□ -1
PTPRT-208ENST00000485499 CPSF1Q10570 1443 aaKnown RBP8.82□□□□□ -1
PTPRT-208ENST00000485499 ESPNB1AK53 854 aa8.82□□□□□ -1
PTPRT-208ENST00000485499 GDF11O95390 407 aa8.82□□□□□ -1
PTPRT-208ENST00000485499 NR3C2P08235 984 aa8.82□□□□□ -1
PTPRT-208ENST00000485499 CDCA7Q9BWT1 371 aaPredicted RBP8.82□□□□□ -1
PTPRT-208ENST00000485499 KLF16Q9BXK1 252 aaPredicted RBP8.82□□□□□ -1
PTPRT-208ENST00000485499 LRRC4BQ9NT99 713 aa8.82□□□□□ -1
PTPRT-208ENST00000485499 TRAK1Q9UPV9 953 aa8.82□□□□□ -1
PTPRT-208ENST00000485499 ITGB4P16144 1822 aa8.82□□□□□ -1
PTPRT-208ENST00000485499 ACEP12821 1306 aa8.81□□□□□ -1
PTPRT-208ENST00000485499 TOMM70O94826 608 aa8.81□□□□□ -1
PTPRT-208ENST00000485499 GCP02774 474 aa8.81□□□□□ -1
PTPRT-208ENST00000485499 BMP1P13497 986 aa8.81□□□□□ -1
PTPRT-208ENST00000485499 WDR4P57081 412 aaKnown RBP8.81□□□□□ -1
PTPRT-208ENST00000485499 RASSF7Q02833 373 aa8.81□□□□□ -1
PTPRT-208ENST00000485499 INTS6LQ5JSJ4 861 aaKnown RBP8.81□□□□□ -1
PTPRT-208ENST00000485499 RNF20Q5VTR2 975 aa8.81□□□□□ -1
PTPRT-208ENST00000485499 JMYQ8N9B5 988 aa8.81□□□□□ -1
PTPRT-208ENST00000485499 NUDT16Q96DE0 195 aaKnown RBP8.81□□□□□ -1
PTPRT-208ENST00000485499 POM121Q96HA1 1249 aa8.81□□□□□ -1
PTPRT-208ENST00000485499 PPIP5K1Q6PFW1 1433 aa8.8□□□□□ -1
PTPRT-208ENST00000485499 CAPN5O15484 640 aaPredicted RBP8.8□□□□□ -1
PTPRT-208ENST00000485499 TIMP2P16035 220 aa8.8□□□□□ -1
PTPRT-208ENST00000485499 PGPEP1Q9NXJ5 209 aa8.8□□□□□ -1
PTPRT-208ENST00000485499 TFCP2L1Q9NZI6 479 aa8.8□□□□□ -1
PTPRT-208ENST00000485499 GTF3C3Q9Y5Q9 886 aa8.8□□□□□ -1
PTPRT-208ENST00000485499 TIAM2Q8IVF5 1701 aa8.8□□□□□ -1
PTPRT-208ENST00000485499 A6NJR5 290 aa8.79□□□□□ -1
PTPRT-208ENST00000485499 VAC14Q08AM6 782 aa8.79□□□□□ -1
PTPRT-208ENST00000485499 PPP1R26Q5T8A7 1209 aaPredicted RBP8.79□□□□□ -1
PTPRT-208ENST00000485499 MSL1Q68DK7 614 aa8.79□□□□□ -1
PTPRT-208ENST00000485499 NLRP13Q86W25 1043 aa8.79□□□□□ -1
PTPRT-208ENST00000485499 C4BP0C0L5 1744 aa8.79□□□□□ -1
PTPRT-208ENST00000485499 MON2Q7Z3U7 1717 aa8.79□□□□□ -1
PTPRT-208ENST00000485499 EXOC5O00471 708 aa8.78□□□□□ -1
PTPRT-208ENST00000485499 ZIC2O95409 532 aaPredicted RBP8.78□□□□□ -1
PTPRT-208ENST00000485499 CSB-PGBD3P0DP91 1061 aa8.78□□□□□ -1
PTPRT-208ENST00000485499 ITPKCQ96DU7 683 aa8.78□□□□□ -1
PTPRT-208ENST00000485499 NFAT5O94916 1531 aa8.78□□□□□ -1
PTPRT-208ENST00000485499 CCDC7Q96M83 1385 aa8.77□□□□□ -1.01
PTPRT-208ENST00000485499 KCNQ4P56696 695 aa8.77□□□□□ -1.01
PTPRT-208ENST00000485499 IGSF1Q8N6C5 1336 aa8.77□□□□□ -1.01
PTPRT-208ENST00000485499 VIRMAQ69YN4 1812 aaKnown RBP8.76□□□□□ -1.01
PTPRT-208ENST00000485499 HSPA1AP0DMV8 641 aaKnown RBP8.76□□□□□ -1.01
PTPRT-208ENST00000485499 HSPA1BP0DMV9 641 aaKnown RBP8.76□□□□□ -1.01
PTPRT-208ENST00000485499 SEMA3FQ13275 785 aa8.76□□□□□ -1.01
PTPRT-208ENST00000485499 SLC27A3Q5K4L6 730 aa8.76□□□□□ -1.01
PTPRT-208ENST00000485499 XP32Q5T750 250 aa8.76□□□□□ -1.01
PTPRT-208ENST00000485499 CLUAP1Q96AJ1 413 aa8.76□□□□□ -1.01
PTPRT-208ENST00000485499 CARD10Q9BWT7 1032 aa8.76□□□□□ -1.01
PTPRT-208ENST00000485499 NMRK2Q9NPI5 230 aa8.76□□□□□ -1.01
PTPRT-208ENST00000485499 CEP126Q9P2H0 1117 aa8.76□□□□□ -1.01
PTPRT-208ENST00000485499 CD2APQ9Y5K6 639 aa8.76□□□□□ -1.01
PTPRT-208ENST00000485499 ERVH48-1M5A8F1 160 aa8.75□□□□□ -1.01
PTPRT-208ENST00000485499 ZFP42Q96MM3 310 aa8.75□□□□□ -1.01
PTPRT-208ENST00000485499 RNF225M0QZC1 329 aaPredicted RBP8.74□□□□□ -1.01
PTPRT-208ENST00000485499 C16orf71Q8IYS4 520 aaPredicted RBP8.74□□□□□ -1.01
PTPRT-208ENST00000485499 CDK19Q9BWU1 502 aa8.74□□□□□ -1.01
PTPRT-208ENST00000485499 ZFAND3Q9H8U3 227 aa8.74□□□□□ -1.01
PTPRT-208ENST00000485499 KCPQ6ZWJ8 1503 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms