RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 PKD1L3Q7Z443 1732 aa10.93□□□□□ -0.66
USP16-206ENST00000485067 MRC1P22897 1456 aa10.92□□□□□ -0.66
USP16-206ENST00000485067 GRM8O00222 908 aa10.92□□□□□ -0.66
USP16-206ENST00000485067 CAPN15O75808 1086 aa10.92□□□□□ -0.66
USP16-206ENST00000485067 MAP4K4O95819 1239 aaPredicted RBP10.92□□□□□ -0.66
USP16-206ENST00000485067 UVSSAQ2YD98 709 aa10.92□□□□□ -0.66
USP16-206ENST00000485067 LARP1Q6PKG0 1096 aaKnown RBP10.92□□□□□ -0.66
USP16-206ENST00000485067 PROCA1Q8NCQ7 364 aaPredicted RBP10.92□□□□□ -0.66
USP16-206ENST00000485067 RBM27Q9P2N5 1060 aaKnown RBP10.92□□□□□ -0.66
USP16-206ENST00000485067 RAD50Q92878 1312 aa10.92□□□□□ -0.66
USP16-206ENST00000485067 MCTP1Q6DN14 999 aa10.92□□□□□ -0.66
USP16-206ENST00000485067 IFNL2Q8IZJ0 200 aa10.92□□□□□ -0.66
USP16-206ENST00000485067 ZGPATQ8N5A5 531 aaKnown RBP10.92□□□□□ -0.66
USP16-206ENST00000485067 PIK3R5Q8WYR1 880 aa10.92□□□□□ -0.66
USP16-206ENST00000485067 ECHDC1Q9NTX5 307 aa10.92□□□□□ -0.66
USP16-206ENST00000485067 PALD1Q9ULE6 856 aa10.92□□□□□ -0.66
USP16-206ENST00000485067 PA2G4Q9UQ80 394 aaKnown RBP10.92□□□□□ -0.66
USP16-206ENST00000485067 RIOK3O14730 519 aaKnown RBP10.91□□□□□ -0.66
USP16-206ENST00000485067 KIF1CO43896 1103 aaKnown RBP10.91□□□□□ -0.66
USP16-206ENST00000485067 NEXNQ0ZGT2 675 aa10.91□□□□□ -0.66
USP16-206ENST00000485067 KAZALD1Q96I82 304 aa10.91□□□□□ -0.66
USP16-206ENST00000485067 IL25Q9H293 177 aa10.91□□□□□ -0.66
USP16-206ENST00000485067 STRN4Q9NRL3 753 aa10.91□□□□□ -0.66
USP16-206ENST00000485067 SOS2Q07890 1332 aaPredicted RBP10.91□□□□□ -0.66
USP16-206ENST00000485067 PARP4Q9UKK3 1724 aaKnown RBP10.91□□□□□ -0.66
USP16-206ENST00000485067 IFIT2P09913 472 aaKnown RBP10.91□□□□□ -0.66
USP16-206ENST00000485067 RHBDL3P58872 404 aa10.91□□□□□ -0.66
USP16-206ENST00000485067 C1QTNF12Q5T7M4 302 aa10.91□□□□□ -0.66
USP16-206ENST00000485067 TOM1L2Q6ZVM7 507 aa10.91□□□□□ -0.66
USP16-206ENST00000485067 LMBRD1Q9NUN5 540 aa10.91□□□□□ -0.66
USP16-206ENST00000485067 DONSONQ9NYP3 566 aa10.91□□□□□ -0.66
USP16-206ENST00000485067 CPDO75976 1380 aa10.9□□□□□ -0.66
USP16-206ENST00000485067 HIP1O00291 1037 aa10.9□□□□□ -0.66
USP16-206ENST00000485067 COQ9O75208 318 aa10.9□□□□□ -0.66
USP16-206ENST00000485067 IGKV5-2P06315 115 aa10.9□□□□□ -0.66
USP16-206ENST00000485067 CCDC181Q5TID7 509 aa10.9□□□□□ -0.66
USP16-206ENST00000485067 CXorf38Q8TB03 319 aa10.9□□□□□ -0.66
USP16-206ENST00000485067 XAGE3Q8WTP9 111 aa10.9□□□□□ -0.66
USP16-206ENST00000485067 DCAF5Q96JK2 942 aa10.9□□□□□ -0.66
USP16-206ENST00000485067 SMC3Q9UQE7 1217 aa10.9□□□□□ -0.66
USP16-206ENST00000485067 TULP2O00295 520 aa10.89□□□□□ -0.67
USP16-206ENST00000485067 ZNF445P59923 1031 aa10.89□□□□□ -0.67
USP16-206ENST00000485067 RIC3Q7Z5B4 369 aa10.89□□□□□ -0.67
USP16-206ENST00000485067 SUCLG2Q96I99 432 aa10.89□□□□□ -0.67
USP16-206ENST00000485067 LSG1Q9H089 658 aaKnown RBP10.89□□□□□ -0.67
USP16-206ENST00000485067 DIAPH3Q9NSV4 1193 aa10.89□□□□□ -0.67
USP16-206ENST00000485067 ZDHHC9Q9Y397 364 aa10.89□□□□□ -0.67
USP16-206ENST00000485067 LAMB4A4D0S4 1761 aa10.89□□□□□ -0.67
USP16-206ENST00000485067 ABCA3Q99758 1704 aa10.89□□□□□ -0.67
USP16-206ENST00000485067 G3BP1Q13283 466 aaKnown RBP eCLIP10.89□□□□□ -0.67
USP16-206ENST00000485067 PKP1Q13835 747 aa10.89□□□□□ -0.67
USP16-206ENST00000485067 COPS6Q7L5N1 327 aa10.89□□□□□ -0.67
USP16-206ENST00000485067 LRP10Q7Z4F1 713 aa10.89□□□□□ -0.67
USP16-206ENST00000485067 CREBRFQ8IUR6 639 aa10.89□□□□□ -0.67
USP16-206ENST00000485067 ANKRD13AQ8IZ07 590 aa10.89□□□□□ -0.67
USP16-206ENST00000485067 ANAPC4Q9UJX5 808 aa10.89□□□□□ -0.67
USP16-206ENST00000485067 GLI3P10071 1580 aa10.89□□□□□ -0.67
USP16-206ENST00000485067 COL5A2P05997 1499 aaPredicted RBP10.89□□□□□ -0.67
USP16-206ENST00000485067 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.88□□□□□ -0.67
USP16-206ENST00000485067 SNRPA1P09661 255 aaKnown RBP10.88□□□□□ -0.67
USP16-206ENST00000485067 TTC5Q8N0Z6 440 aa10.88□□□□□ -0.67
USP16-206ENST00000485067 KLHDC4Q8TBB5 520 aa10.88□□□□□ -0.67
USP16-206ENST00000485067 DDX54Q8TDD1 881 aaKnown RBP10.88□□□□□ -0.67
USP16-206ENST00000485067 SUGT1Q9Y2Z0 365 aa10.88□□□□□ -0.67
USP16-206ENST00000485067 WDR17Q8IZU2 1322 aa10.88□□□□□ -0.67
USP16-206ENST00000485067 COL15A1P39059 1388 aa10.88□□□□□ -0.67
USP16-206ENST00000485067 AFDNP55196 1824 aaKnown RBP10.88□□□□□ -0.67
USP16-206ENST00000485067 TDO2P48775 406 aa10.88□□□□□ -0.67
USP16-206ENST00000485067 CABP4P57796 275 aa10.88□□□□□ -0.67
USP16-206ENST00000485067 EPHA10Q5JZY3 1008 aa10.88□□□□□ -0.67
USP16-206ENST00000485067 METTL22Q9BUU2 404 aaPredicted RBP10.88□□□□□ -0.67
USP16-206ENST00000485067 PANK2Q9BZ23 570 aa10.88□□□□□ -0.67
USP16-206ENST00000485067 BICC1Q9H694 974 aaKnown RBP10.88□□□□□ -0.67
USP16-206ENST00000485067 SNX14Q9Y5W7 946 aa10.88□□□□□ -0.67
USP16-206ENST00000485067 CCDC66A2RUB6 948 aa10.87□□□□□ -0.67
USP16-206ENST00000485067 NEURL1BA8MQ27 555 aa10.87□□□□□ -0.67
USP16-206ENST00000485067 MBD3O95983 291 aa10.87□□□□□ -0.67
USP16-206ENST00000485067 GAS2L3Q86XJ1 694 aa10.87□□□□□ -0.67
USP16-206ENST00000485067 FMNL2Q96PY5 1086 aa10.87□□□□□ -0.67
USP16-206ENST00000485067 GCKRQ14397 625 aa10.87□□□□□ -0.67
USP16-206ENST00000485067 CWC27Q6UX04 472 aaKnown RBP10.87□□□□□ -0.67
USP16-206ENST00000485067 AACSQ86V21 672 aa10.87□□□□□ -0.67
USP16-206ENST00000485067 MYD88Q99836 296 aa10.87□□□□□ -0.67
USP16-206ENST00000485067 RNF39Q9H2S5 420 aa10.87□□□□□ -0.67
USP16-206ENST00000485067 FRMD4BQ9Y2L6 1034 aa10.87□□□□□ -0.67
USP16-206ENST00000485067 WDR33Q9C0J8 1336 aaKnown RBP10.87□□□□□ -0.67
USP16-206ENST00000485067 ARFGEF2Q9Y6D5 1785 aa10.87□□□□□ -0.67
USP16-206ENST00000485067 KLHL33A6NCF5 533 aa10.86□□□□□ -0.67
USP16-206ENST00000485067 ATP5J2-PTCD1G3V325 749 aa10.86□□□□□ -0.67
USP16-206ENST00000485067 PTCD1O75127 700 aaKnown RBP10.86□□□□□ -0.67
USP16-206ENST00000485067 PRPF40AO75400 957 aaKnown RBP10.86□□□□□ -0.67
USP16-206ENST00000485067 PDE4DQ08499 809 aa10.86□□□□□ -0.67
USP16-206ENST00000485067 ANKRD13DQ6ZTN6 518 aa10.86□□□□□ -0.67
USP16-206ENST00000485067 ZCRB1Q8TBF4 217 aaKnown RBP10.86□□□□□ -0.67
USP16-206ENST00000485067 KCNB2Q92953 911 aa10.86□□□□□ -0.67
USP16-206ENST00000485067 AK7Q96M32 723 aa10.86□□□□□ -0.67
USP16-206ENST00000485067 TIGD1Q96MW7 591 aa10.86□□□□□ -0.67
USP16-206ENST00000485067 TTC14Q96N46 770 aa10.86□□□□□ -0.67
USP16-206ENST00000485067 UPF3BQ9BZI7 483 aaKnown RBP10.86□□□□□ -0.67
USP16-206ENST00000485067 TM6SF1Q9BZW5 370 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms