RNA–Protein interactions for RNA: ENST00000484913.5

PEX1-208, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 4,051 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-208ENST00000484913 SLC4A8Q2Y0W8 1093 aa13.4□□□□□ -0.26
PEX1-208ENST00000484913 ANKRD18AQ8IVF6 992 aa13.4□□□□□ -0.26
PEX1-208ENST00000484913 RASEFQ8IZ41 740 aa13.39□□□□□ -0.27
PEX1-208ENST00000484913 AFDNP55196 1824 aaKnown RBP13.39□□□□□ -0.27
PEX1-208ENST00000484913 ERVV-1B6SEH8 477 aa13.39□□□□□ -0.27
PEX1-208ENST00000484913 PHKA1P46020 1223 aa13.39□□□□□ -0.27
PEX1-208ENST00000484913 C3orf67Q6ZVT6 689 aa13.39□□□□□ -0.27
PEX1-208ENST00000484913 NLRP3Q96P20 1036 aa13.39□□□□□ -0.27
PEX1-208ENST00000484913 KIF2CQ99661 725 aa13.39□□□□□ -0.27
PEX1-208ENST00000484913 GOLGB1Q14789 3259 aaKnown RBP13.39□□□□□ -0.27
PEX1-208ENST00000484913 PARP10Q53GL7 1025 aa13.39□□□□□ -0.27
PEX1-208ENST00000484913 CHMP5Q9NZZ3 219 aa13.39□□□□□ -0.27
PEX1-208ENST00000484913 ANKIB1Q9P2G1 1089 aa13.39□□□□□ -0.27
PEX1-208ENST00000484913 TOGARAM1Q9Y4F4 1720 aa13.39□□□□□ -0.27
PEX1-208ENST00000484913 KLHL34Q8N239 644 aa13.39□□□□□ -0.27
PEX1-208ENST00000484913 WTIPA6NIX2 430 aaPredicted RBP13.38□□□□□ -0.27
PEX1-208ENST00000484913 CHST3Q7LGC8 479 aa13.38□□□□□ -0.27
PEX1-208ENST00000484913 ZNF34Q8IZ26 560 aa13.38□□□□□ -0.27
PEX1-208ENST00000484913 CHMP4CQ96CF2 233 aa13.38□□□□□ -0.27
PEX1-208ENST00000484913 SIPA1L3O60292 1781 aaPredicted RBP13.38□□□□□ -0.27
PEX1-208ENST00000484913 DOT1LQ8TEK3 1739 aa13.38□□□□□ -0.27
PEX1-208ENST00000484913 SLC5A1P13866 664 aa13.38□□□□□ -0.27
PEX1-208ENST00000484913 TPTE2Q6XPS3 522 aa13.38□□□□□ -0.27
PEX1-208ENST00000484913 RAB11FIP4Q86YS3 637 aa13.38□□□□□ -0.27
PEX1-208ENST00000484913 HIP1O00291 1037 aa13.38□□□□□ -0.27
PEX1-208ENST00000484913 ATP5JP18859 108 aa13.38□□□□□ -0.27
PEX1-208ENST00000484913 BCAMP50895 628 aa13.38□□□□□ -0.27
PEX1-208ENST00000484913 CDC5LQ99459 802 aaKnown RBP13.38□□□□□ -0.27
PEX1-208ENST00000484913 LRP2BPQ9P2M1 347 aa13.38□□□□□ -0.27
PEX1-208ENST00000484913 AOX1Q06278 1338 aa13.37□□□□□ -0.27
PEX1-208ENST00000484913 GPR101Q96P66 508 aaPredicted RBP13.37□□□□□ -0.27
PEX1-208ENST00000484913 GYG1P46976 350 aa13.37□□□□□ -0.27
PEX1-208ENST00000484913 CNBD1Q8NA66 436 aa13.37□□□□□ -0.27
PEX1-208ENST00000484913 LRRC4BQ9NT99 713 aa13.37□□□□□ -0.27
PEX1-208ENST00000484913 RAI14Q9P0K7 980 aa13.37□□□□□ -0.27
PEX1-208ENST00000484913 CCDC171Q6TFL3 1326 aa13.36□□□□□ -0.27
PEX1-208ENST00000484913 RPS6KA4O75676 772 aa13.36□□□□□ -0.27
PEX1-208ENST00000484913 SSFA2P28290 1259 aa13.36□□□□□ -0.27
PEX1-208ENST00000484913 ADCK5Q3MIX3 580 aa13.36□□□□□ -0.27
PEX1-208ENST00000484913 SLC9C2Q5TAH2 1124 aa13.36□□□□□ -0.27
PEX1-208ENST00000484913 RNF20Q5VTR2 975 aa13.36□□□□□ -0.27
PEX1-208ENST00000484913 CHAMP1Q96JM3 812 aa13.36□□□□□ -0.27
PEX1-208ENST00000484913 SNX14Q9Y5W7 946 aa13.36□□□□□ -0.27
PEX1-208ENST00000484913 ITGB4P16144 1822 aa13.36□□□□□ -0.27
PEX1-208ENST00000484913 TRIM28Q13263 835 aaKnown RBP13.36□□□□□ -0.27
PEX1-208ENST00000484913 VPS53Q5VIR6 699 aa13.36□□□□□ -0.27
PEX1-208ENST00000484913 NECAB1Q8N987 351 aa13.36□□□□□ -0.27
PEX1-208ENST00000484913 MIGA1Q8NAN2 632 aa13.36□□□□□ -0.27
PEX1-208ENST00000484913 CELF1Q92879 486 aaKnown RBP13.36□□□□□ -0.27
PEX1-208ENST00000484913 RXRBP28702 533 aa13.36□□□□□ -0.27
PEX1-208ENST00000484913 PDRG1Q9NUG6 133 aa13.36□□□□□ -0.27
PEX1-208ENST00000484913 CYP46A1Q9Y6A2 500 aa13.36□□□□□ -0.27
PEX1-208ENST00000484913 CHRNDQ07001 517 aa13.35□□□□□ -0.27
PEX1-208ENST00000484913 RRP12Q5JTH9 1297 aaKnown RBP13.35□□□□□ -0.27
PEX1-208ENST00000484913 SLC51AQ86UW1 340 aa13.35□□□□□ -0.27
PEX1-208ENST00000484913 CCDC83Q8IWF9 413 aa13.35□□□□□ -0.27
PEX1-208ENST00000484913 RPGRQ92834 1020 aaKnown RBP13.35□□□□□ -0.27
PEX1-208ENST00000484913 PPP1R1BQ9UD71 204 aaPredicted RBP13.35□□□□□ -0.27
PEX1-208ENST00000484913 RAD50Q92878 1312 aa13.35□□□□□ -0.27
PEX1-208ENST00000484913 TMX3Q96JJ7 454 aa13.35□□□□□ -0.27
PEX1-208ENST00000484913 LSG1Q9H089 658 aaKnown RBP13.35□□□□□ -0.27
PEX1-208ENST00000484913 PDE8BO95263 885 aa13.35□□□□□ -0.27
PEX1-208ENST00000484913 NTSR2O95665 410 aa13.35□□□□□ -0.27
PEX1-208ENST00000484913 CREB3L3Q68CJ9 461 aa13.35□□□□□ -0.27
PEX1-208ENST00000484913 CCDC102BQ68D86 513 aa13.35□□□□□ -0.27
PEX1-208ENST00000484913 HAUS7Q99871 368 aa13.35□□□□□ -0.27
PEX1-208ENST00000484913 TTLL5Q6EMB2 1281 aa13.34□□□□□ -0.27
PEX1-208ENST00000484913 BLOC1S2Q6QNY1 142 aa13.34□□□□□ -0.27
PEX1-208ENST00000484913 KBTBD3Q8NAB2 608 aa13.34□□□□□ -0.27
PEX1-208ENST00000484913 PUM3Q15397 648 aaKnown RBP13.34□□□□□ -0.27
PEX1-208ENST00000484913 MCMDC2Q4G0Z9 681 aa13.34□□□□□ -0.27
PEX1-208ENST00000484913 TAF6LQ9Y6J9 622 aa13.34□□□□□ -0.27
PEX1-208ENST00000484913 TXNRD1Q16881 649 aa13.34□□□□□ -0.27
PEX1-208ENST00000484913 NARFQ9UHQ1 456 aa13.34□□□□□ -0.27
PEX1-208ENST00000484913 NSFL1CQ9UNZ2 370 aaKnown RBP13.34□□□□□ -0.27
PEX1-208ENST00000484913 ARFGEF2Q9Y6D5 1785 aa13.33□□□□□ -0.27
PEX1-208ENST00000484913 VPS37CA5D8V6 355 aaPredicted RBP13.33□□□□□ -0.28
PEX1-208ENST00000484913 PKP1Q13835 747 aa13.33□□□□□ -0.28
PEX1-208ENST00000484913 DEKP35659 375 aaKnown RBP13.33□□□□□ -0.28
PEX1-208ENST00000484913 MCAMP43121 646 aa13.33□□□□□ -0.28
PEX1-208ENST00000484913 AK2P54819 239 aa13.33□□□□□ -0.28
PEX1-208ENST00000484913 MAGEB6Q8N7X4 407 aa13.33□□□□□ -0.28
PEX1-208ENST00000484913 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.33□□□□□ -0.28
PEX1-208ENST00000484913 RIPOR2Q9Y4F9 1068 aa13.33□□□□□ -0.28
PEX1-208ENST00000484913 CSF1RP07333 972 aa13.33□□□□□ -0.28
PEX1-208ENST00000484913 RBM6P78332 1123 aaKnown RBP13.33□□□□□ -0.28
PEX1-208ENST00000484913 NFIXQ14938 502 aa13.33□□□□□ -0.28
PEX1-208ENST00000484913 MCTP1Q6DN14 999 aa13.33□□□□□ -0.28
PEX1-208ENST00000484913 AIDAQ96BJ3 306 aa13.33□□□□□ -0.28
PEX1-208ENST00000484913 PLEKHG2Q9H7P9 1386 aa13.32□□□□□ -0.28
PEX1-208ENST00000484913 G3V3G9 751 aa13.32□□□□□ -0.28
PEX1-208ENST00000484913 DCAF8Q5TAQ9 597 aa13.32□□□□□ -0.28
PEX1-208ENST00000484913 ZNF772Q68DY9 489 aaPredicted RBP13.32□□□□□ -0.28
PEX1-208ENST00000484913 SHANK3Q9BYB0 1731 aa13.32□□□□□ -0.28
PEX1-208ENST00000484913 A0A0G2JLW4 131 aa13.32□□□□□ -0.28
PEX1-208ENST00000484913 RNF113AO15541 343 aaKnown RBP13.32□□□□□ -0.28
PEX1-208ENST00000484913 CIAO1O76071 339 aa13.32□□□□□ -0.28
PEX1-208ENST00000484913 HSPA4P34932 840 aa13.32□□□□□ -0.28
PEX1-208ENST00000484913 NYXQ9GZU5 481 aa13.32□□□□□ -0.28
PEX1-208ENST00000484913 CDHR2Q9BYE9 1310 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms