RNA–Protein interactions for RNA: ENST00000484841.5

ACTB-212, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-212ENST00000484841 GGA1Q9UJY5 639 aa25.82■■□□□ 1.72
ACTB-212ENST00000484841 SALL2Q9Y467 1007 aaPredicted RBP25.82■■□□□ 1.72
ACTB-212ENST00000484841 WDR33Q9C0J8 1336 aaKnown RBP25.82■■□□□ 1.72
ACTB-212ENST00000484841 MYH3P11055 1940 aa25.81■■□□□ 1.72
ACTB-212ENST00000484841 PSMD14O00487 310 aa25.81■■□□□ 1.72
ACTB-212ENST00000484841 DPF2Q92785 391 aa25.81■■□□□ 1.72
ACTB-212ENST00000484841 PODXL2Q9NZ53 605 aa25.81■■□□□ 1.72
ACTB-212ENST00000484841 ZBTB12Q9Y330 459 aaPredicted RBP25.81■■□□□ 1.72
ACTB-212ENST00000484841 FMR1Q06787 632 aaKnown RBP eCLIP25.8■■□□□ 1.721e-47■□□□□ 8.3
ACTB-212ENST00000484841 GRM1Q13255 1194 aa25.8■■□□□ 1.72
ACTB-212ENST00000484841 CDC37L1Q7L3B6 337 aa25.8■■□□□ 1.72
ACTB-212ENST00000484841 CACNA1FO60840 1977 aa25.79■■□□□ 1.72
ACTB-212ENST00000484841 RPS12P25398 132 aaKnown RBP25.79■■□□□ 1.72
ACTB-212ENST00000484841 CTCFP49711 727 aaPredicted RBP25.79■■□□□ 1.72
ACTB-212ENST00000484841 MAP2K1Q02750 393 aaPredicted RBP25.79■■□□□ 1.72
ACTB-212ENST00000484841 GPR101Q96P66 508 aaPredicted RBP25.79■■□□□ 1.72
ACTB-212ENST00000484841 COL4A1P02462 1669 aa25.79■■□□□ 1.72
ACTB-212ENST00000484841 FOXN1O15353 648 aa25.78■■□□□ 1.72
ACTB-212ENST00000484841 CELF2O95319 508 aaKnown RBP25.78■■□□□ 1.72
ACTB-212ENST00000484841 CTSWP56202 376 aa25.78■■□□□ 1.72
ACTB-212ENST00000484841 WDR63Q8IWG1 891 aa25.78■■□□□ 1.72
ACTB-212ENST00000484841 GLIS2Q9BZE0 524 aaPredicted RBP25.78■■□□□ 1.72
ACTB-212ENST00000484841 ZNF408Q9H9D4 720 aa25.78■■□□□ 1.72
ACTB-212ENST00000484841 PGAP2Q9UHJ9 254 aa25.78■■□□□ 1.72
ACTB-212ENST00000484841 CAPN15O75808 1086 aa25.77■■□□□ 1.72
ACTB-212ENST00000484841 IGKV5-2P06315 115 aa25.77■■□□□ 1.72
ACTB-212ENST00000484841 CWF19L2Q2TBE0 894 aaKnown RBP25.77■■□□□ 1.72
ACTB-212ENST00000484841 CST9Q5W186 159 aa25.77■■□□□ 1.72
ACTB-212ENST00000484841 TRPM4Q8TD43 1214 aa25.77■■□□□ 1.72
ACTB-212ENST00000484841 CAPNS2Q96L46 248 aa25.77■■□□□ 1.72
ACTB-212ENST00000484841 BEGAINQ9BUH8 593 aa25.77■■□□□ 1.72
ACTB-212ENST00000484841 XDHP47989 1333 aa25.77■■□□□ 1.72
ACTB-212ENST00000484841 NEURL1BA8MQ27 555 aa25.76■■□□□ 1.71
ACTB-212ENST00000484841 ATP2B4P23634 1241 aa25.76■■□□□ 1.71
ACTB-212ENST00000484841 HIRAP54198 1017 aaPredicted RBP25.76■■□□□ 1.71
ACTB-212ENST00000484841 FKBP5Q13451 457 aaPredicted RBP25.76■■□□□ 1.71
ACTB-212ENST00000484841 G2E3Q7L622 706 aa25.76■■□□□ 1.71
ACTB-212ENST00000484841 TLL2Q9Y6L7 1015 aa25.76■■□□□ 1.71
ACTB-212ENST00000484841 FANCIQ9NVI1 1328 aa25.76■■□□□ 1.71
ACTB-212ENST00000484841 SPEF2Q9C093 1822 aa25.75■■□□□ 1.71
ACTB-212ENST00000484841 SHTN1A0MZ66 631 aa25.75■■□□□ 1.71
ACTB-212ENST00000484841 RBM26Q5T8P6 1007 aaKnown RBP25.75■■□□□ 1.71
ACTB-212ENST00000484841 SAMD7Q7Z3H4 446 aa25.75■■□□□ 1.71
ACTB-212ENST00000484841 MYH16Q9H6N6 1097 aa25.75■■□□□ 1.71
ACTB-212ENST00000484841 WBP1LQ9NX94 342 aa25.75■■□□□ 1.71
ACTB-212ENST00000484841 FLIIQ13045 1269 aa25.74■■□□□ 1.71
ACTB-212ENST00000484841 TBC1D10BQ4KMP7 808 aaPredicted RBP25.74■■□□□ 1.71
ACTB-212ENST00000484841 CYP4F22Q6NT55 531 aa25.74■■□□□ 1.71
ACTB-212ENST00000484841 UBE3BQ7Z3V4 1068 aa25.74■■□□□ 1.71
ACTB-212ENST00000484841 TTLL11Q8NHH1 800 aa25.74■■□□□ 1.71
ACTB-212ENST00000484841 DCPSQ96C86 337 aaKnown RBP25.74■■□□□ 1.71
ACTB-212ENST00000484841 PRDM10Q9NQV6 1147 aa25.74■■□□□ 1.71
ACTB-212ENST00000484841 KCNQ5Q9NR82 932 aa25.73■■□□□ 1.71
ACTB-212ENST00000484841 IGHMBP2P38935 993 aaKnown RBP25.72■■□□□ 1.71
ACTB-212ENST00000484841 FAM9BQ8IZU0 186 aa25.72■■□□□ 1.71
ACTB-212ENST00000484841 DNAAF4Q8WXU2 420 aa25.72■■□□□ 1.71
ACTB-212ENST00000484841 GREM2Q9H772 168 aa25.72■■□□□ 1.71
ACTB-212ENST00000484841 RTL9Q8NET4 1388 aa25.71■■□□□ 1.71
ACTB-212ENST00000484841 H7C1W4 665 aa25.71■■□□□ 1.71
ACTB-212ENST00000484841 VIL1P09327 827 aaKnown RBP25.71■■□□□ 1.71
ACTB-212ENST00000484841 USP48Q86UV5 1035 aa25.71■■□□□ 1.71
ACTB-212ENST00000484841 BSDC1Q9NW68 430 aaPredicted RBP25.71■■□□□ 1.71
ACTB-212ENST00000484841 EXOSC9Q06265 439 aaKnown RBP25.7■■□□□ 1.7
ACTB-212ENST00000484841 GCKRQ14397 625 aa25.7■■□□□ 1.7
ACTB-212ENST00000484841 SAPCD2Q86UD0 394 aa25.7■■□□□ 1.7
ACTB-212ENST00000484841 SCN9AQ15858 1988 aa25.69■■□□□ 1.7
ACTB-212ENST00000484841 VAMP4O75379 141 aa25.69■■□□□ 1.7
ACTB-212ENST00000484841 LBX1P52954 281 aa25.69■■□□□ 1.7
ACTB-212ENST00000484841 KIF4BQ2VIQ3 1234 aa25.69■■□□□ 1.7
ACTB-212ENST00000484841 KRT26Q7Z3Y9 468 aa25.69■■□□□ 1.7
ACTB-212ENST00000484841 LINS1Q8NG48 757 aa25.69■■□□□ 1.7
ACTB-212ENST00000484841 MPHOSPH8Q99549 860 aa25.69■■□□□ 1.7
ACTB-212ENST00000484841 POLR2AP24928 1970 aaKnown RBP25.68■■□□□ 1.7
ACTB-212ENST00000484841 PODNQ7Z5L7 613 aa25.68■■□□□ 1.7
ACTB-212ENST00000484841 AGBL3Q8NEM8 1001 aa25.68■■□□□ 1.7
ACTB-212ENST00000484841 HHIPL1Q96JK4 782 aa25.68■■□□□ 1.7
ACTB-212ENST00000484841 PSME4Q14997 1843 aa25.67■■□□□ 1.7
ACTB-212ENST00000484841 PCNTO95613 3336 aa25.67■■□□□ 1.7
ACTB-212ENST00000484841 MAP2K2P36507 400 aa25.67■■□□□ 1.7
ACTB-212ENST00000484841 RSBN1LQ6PCB5 846 aaPredicted RBP25.67■■□□□ 1.7
ACTB-212ENST00000484841 MINPP1Q9UNW1 487 aa25.67■■□□□ 1.7
ACTB-212ENST00000484841 SULF1Q8IWU6 871 aa25.66■■□□□ 1.7
ACTB-212ENST00000484841 THSD7BQ9C0I4 1608 aa25.66■■□□□ 1.7
ACTB-212ENST00000484841 USP17L3A6NCW0 530 aa25.65■■□□□ 1.7
ACTB-212ENST00000484841 USP17L4A6NCW7 530 aa25.65■■□□□ 1.7
ACTB-212ENST00000484841 EGFRP00533 1210 aa25.65■■□□□ 1.7
ACTB-212ENST00000484841 ITGA6P23229 1130 aa25.65■■□□□ 1.7
ACTB-212ENST00000484841 CCT4P50991 539 aaKnown RBP25.65■■□□□ 1.7
ACTB-212ENST00000484841 USP17L1Q7RTZ2 530 aa25.65■■□□□ 1.7
ACTB-212ENST00000484841 PLA2G12BQ9BX93 195 aa25.65■■□□□ 1.7
ACTB-212ENST00000484841 ANKRD2Q9GZV1 360 aa25.65■■□□□ 1.7
ACTB-212ENST00000484841 MED23Q9ULK4 1368 aa25.65■■□□□ 1.7
ACTB-212ENST00000484841 HSPA8P11142 646 aaKnown RBP25.64■■□□□ 1.7
ACTB-212ENST00000484841 C2orf69Q8N8R5 385 aa25.64■■□□□ 1.7
ACTB-212ENST00000484841 FBXW7Q969H0 707 aa25.64■■□□□ 1.7
ACTB-212ENST00000484841 LEMD3Q9Y2U8 911 aa25.64■■□□□ 1.7
ACTB-212ENST00000484841 AOC2O75106 756 aa25.63■■□□□ 1.69
ACTB-212ENST00000484841 USP17L8P0C7I0 530 aa25.63■■□□□ 1.69
ACTB-212ENST00000484841 KCNJ4P48050 445 aa25.63■■□□□ 1.69
ACTB-212ENST00000484841 HUNKP57058 714 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms