RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 ALKBH2Q6NS38 261 aa8.24□□□□□ -1.09
SMC4-215ENST00000484799 ZNF438Q7Z4V0 828 aa8.24□□□□□ -1.09
SMC4-215ENST00000484799 NCAPG2Q86XI2 1143 aa8.24□□□□□ -1.09
SMC4-215ENST00000484799 FMR1NBQ8N0W7 255 aaPredicted RBP8.24□□□□□ -1.09
SMC4-215ENST00000484799 CACTIN-AS1Q8N1I8 211 aa8.24□□□□□ -1.09
SMC4-215ENST00000484799 LENG1Q96BZ8 264 aaPredicted RBP8.24□□□□□ -1.09
SMC4-215ENST00000484799 SMNDC1O75940 238 aaKnown RBP eCLIP8.23□□□□□ -1.09
SMC4-215ENST00000484799 ABI2Q9NYB9 513 aaPredicted RBP8.23□□□□□ -1.09
SMC4-215ENST00000484799 ZBTB39O15060 712 aa8.22□□□□□ -1.09
SMC4-215ENST00000484799 B4GALNT3Q6L9W6 998 aa8.22□□□□□ -1.09
SMC4-215ENST00000484799 FBXO11Q86XK2 927 aa8.22□□□□□ -1.09
SMC4-215ENST00000484799 HELQQ8TDG4 1101 aa8.22□□□□□ -1.09
SMC4-215ENST00000484799 GTF3C2Q8WUA4 911 aaPredicted RBP8.22□□□□□ -1.09
SMC4-215ENST00000484799 NUDT16Q96DE0 195 aaKnown RBP8.22□□□□□ -1.09
SMC4-215ENST00000484799 ARID3AQ99856 593 aa8.22□□□□□ -1.09
SMC4-215ENST00000484799 MUC3BQ9H195 1237 aa8.22□□□□□ -1.09
SMC4-215ENST00000484799 TRIP4Q15650 581 aaPredicted RBP8.21□□□□□ -1.1
SMC4-215ENST00000484799 CEP135Q66GS9 1140 aa8.21□□□□□ -1.1
SMC4-215ENST00000484799 PDE12Q6L8Q7 609 aaKnown RBP8.21□□□□□ -1.1
SMC4-215ENST00000484799 IGF2-ASQ6U949 168 aa8.21□□□□□ -1.1
SMC4-215ENST00000484799 SHISA2Q6UWI4 295 aa8.21□□□□□ -1.1
SMC4-215ENST00000484799 TXNRD3Q86VQ6 643 aa8.21□□□□□ -1.1
SMC4-215ENST00000484799 OR13H1Q8NG92 308 aa8.21□□□□□ -1.1
SMC4-215ENST00000484799 EDEM1Q92611 657 aa8.21□□□□□ -1.1
SMC4-215ENST00000484799 ELP3Q9H9T3 547 aa8.21□□□□□ -1.1
SMC4-215ENST00000484799 ABL1P00519 1130 aa8.2□□□□□ -1.1
SMC4-215ENST00000484799 SELPP16109 830 aa8.2□□□□□ -1.1
SMC4-215ENST00000484799 SSFA2P28290 1259 aa8.2□□□□□ -1.1
SMC4-215ENST00000484799 FAM117BQ6P1L5 589 aa8.2□□□□□ -1.1
SMC4-215ENST00000484799 ATCAYQ86WG3 371 aa8.2□□□□□ -1.1
SMC4-215ENST00000484799 PPME1Q9Y570 386 aa8.2□□□□□ -1.1
SMC4-215ENST00000484799 FAM13AO94988 1023 aa8.19□□□□□ -1.1
SMC4-215ENST00000484799 CES1P23141 567 aa8.19□□□□□ -1.1
SMC4-215ENST00000484799 PDE4CQ08493 712 aa8.19□□□□□ -1.1
SMC4-215ENST00000484799 ADGRE1Q14246 886 aa8.19□□□□□ -1.1
SMC4-215ENST00000484799 FAM26DQ5JW98 314 aa8.19□□□□□ -1.1
SMC4-215ENST00000484799 MAP4K3Q8IVH8 894 aa8.19□□□□□ -1.1
SMC4-215ENST00000484799 PMEPA1Q969W9 287 aa8.19□□□□□ -1.1
SMC4-215ENST00000484799 TPSG1Q9NRR2 321 aa8.19□□□□□ -1.1
SMC4-215ENST00000484799 SLAIN2Q9P270 581 aa8.19□□□□□ -1.1
SMC4-215ENST00000484799 MBTPS1Q14703 1052 aa8.18□□□□□ -1.1
SMC4-215ENST00000484799 GRIK5Q16478 980 aa8.18□□□□□ -1.1
SMC4-215ENST00000484799 TP53INP1Q96A56 240 aa8.18□□□□□ -1.1
SMC4-215ENST00000484799 LACRTQ9GZZ8 138 aa8.18□□□□□ -1.1
SMC4-215ENST00000484799 SRA1Q9HD15 236 aaKnown RBP8.18□□□□□ -1.1
SMC4-215ENST00000484799 MZF1P28698 734 aaPredicted RBP8.17□□□□□ -1.1
SMC4-215ENST00000484799 EIF1AXP47813 144 aaKnown RBP8.17□□□□□ -1.1
SMC4-215ENST00000484799 C1orf115Q9H7X2 142 aa8.17□□□□□ -1.1
SMC4-215ENST00000484799 TMEM88BA6NKF7 163 aa8.16□□□□□ -1.1
SMC4-215ENST00000484799 HOXD8P13378 290 aaPredicted RBP8.16□□□□□ -1.1
SMC4-215ENST00000484799 MPSTP25325 297 aa8.16□□□□□ -1.1
SMC4-215ENST00000484799 CDC27P30260 824 aa8.16□□□□□ -1.1
SMC4-215ENST00000484799 CDC25BP30305 580 aa8.16□□□□□ -1.1
SMC4-215ENST00000484799 USP5P45974 858 aa8.16□□□□□ -1.1
SMC4-215ENST00000484799 IREB2P48200 963 aaKnown RBP8.16□□□□□ -1.1
SMC4-215ENST00000484799 CABP4P57796 275 aa8.16□□□□□ -1.1
SMC4-215ENST00000484799 FKBP4Q02790 459 aaKnown RBP eCLIP8.16□□□□□ -1.1
SMC4-215ENST00000484799 SF3B2Q13435 895 aaKnown RBP8.16□□□□□ -1.1
SMC4-215ENST00000484799 WFDC12Q8WWY7 111 aa8.16□□□□□ -1.1
SMC4-215ENST00000484799 TRIM33Q9UPN9 1127 aa8.16□□□□□ -1.1
SMC4-215ENST00000484799 SUPT5HO00267 1087 aaKnown RBP8.15□□□□□ -1.1
SMC4-215ENST00000484799 EHHADHQ08426 723 aa8.15□□□□□ -1.1
SMC4-215ENST00000484799 MRPL18Q9H0U6 180 aaKnown RBP8.15□□□□□ -1.1
SMC4-215ENST00000484799 LINC01387J3KSC0 135 aa8.14□□□□□ -1.11
SMC4-215ENST00000484799 PDGFAP04085 211 aa8.14□□□□□ -1.11
SMC4-215ENST00000484799 PTPRAP18433 802 aa8.14□□□□□ -1.11
SMC4-215ENST00000484799 PBX4Q9BYU1 374 aa8.14□□□□□ -1.11
SMC4-215ENST00000484799 RASSF4Q9H2L5 321 aa8.14□□□□□ -1.11
SMC4-215ENST00000484799 AKTIPQ9H8T0 292 aa8.14□□□□□ -1.11
SMC4-215ENST00000484799 TMEM63CQ9P1W3 806 aa8.14□□□□□ -1.11
SMC4-215ENST00000484799 POLIQ9UNA4 740 aa8.14□□□□□ -1.11
SMC4-215ENST00000484799 CYP2E1P05181 493 aaPredicted RBP8.13□□□□□ -1.11
SMC4-215ENST00000484799 ATP11AP98196 1134 aa8.13□□□□□ -1.11
SMC4-215ENST00000484799 MTMR3Q13615 1198 aa8.13□□□□□ -1.11
SMC4-215ENST00000484799 RSPO4Q2I0M5 234 aaPredicted RBP8.13□□□□□ -1.11
SMC4-215ENST00000484799 COL13A1Q5TAT6 717 aaPredicted RBP8.13□□□□□ -1.11
SMC4-215ENST00000484799 XKR5Q6UX68 686 aa8.13□□□□□ -1.11
SMC4-215ENST00000484799 ANO2Q9NQ90 1003 aa8.13□□□□□ -1.11
SMC4-215ENST00000484799 KANSL3Q9P2N6 904 aa8.13□□□□□ -1.11
SMC4-215ENST00000484799 USTQ9Y2C2 406 aa8.13□□□□□ -1.11
SMC4-215ENST00000484799 CARNS1A5YM72 827 aa8.12□□□□□ -1.11
SMC4-215ENST00000484799 PHACTR2O75167 634 aa8.12□□□□□ -1.11
SMC4-215ENST00000484799 ARL4DP49703 201 aa8.12□□□□□ -1.11
SMC4-215ENST00000484799 ZMYM1Q5SVZ6 1142 aa8.12□□□□□ -1.11
SMC4-215ENST00000484799 C1orf127Q8N9H9 656 aa8.12□□□□□ -1.11
SMC4-215ENST00000484799 GGNBP2Q9H3C7 697 aa8.12□□□□□ -1.11
SMC4-215ENST00000484799 SCO2A0A1W2PP80 73 aa8.11□□□□□ -1.11
SMC4-215ENST00000484799 DLL1O00548 723 aa8.11□□□□□ -1.11
SMC4-215ENST00000484799 DEAF1O75398 565 aaPredicted RBP8.11□□□□□ -1.11
SMC4-215ENST00000484799 H2AFB1P0C5Y9 115 aa8.11□□□□□ -1.11
SMC4-215ENST00000484799 H2AFB2P0C5Z0 115 aa8.11□□□□□ -1.11
SMC4-215ENST00000484799 NKAPLQ5M9Q1 402 aa8.11□□□□□ -1.11
SMC4-215ENST00000484799 CNTN3Q9P232 1028 aa8.11□□□□□ -1.11
SMC4-215ENST00000484799 DYRK3O43781 588 aa8.1□□□□□ -1.11
SMC4-215ENST00000484799 KIF4AO95239 1232 aa8.1□□□□□ -1.11
SMC4-215ENST00000484799 TXNDC11Q6PKC3 985 aa8.1□□□□□ -1.11
SMC4-215ENST00000484799 CEP120Q8N960 986 aa8.1□□□□□ -1.11
SMC4-215ENST00000484799 BRPF3Q9ULD4 1205 aa8.1□□□□□ -1.11
SMC4-215ENST00000484799 A6NHS1 94 aa8.09□□□□□ -1.11
SMC4-215ENST00000484799 NEFLP07196 543 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms