RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 KBTBD3Q8NAB2 608 aa8.83□□□□□ -1
SHROOM3-206ENST00000484236 TMEM87AQ8NBN3 555 aa8.83□□□□□ -1
SHROOM3-206ENST00000484236 HELLSQ9NRZ9 838 aa8.83□□□□□ -1
SHROOM3-206ENST00000484236 SMC3Q9UQE7 1217 aa8.83□□□□□ -1
SHROOM3-206ENST00000484236 AKAP2Q9Y2D5 859 aa8.83□□□□□ -1
SHROOM3-206ENST00000484236 CICQ96RK0 1608 aaPredicted RBP8.83□□□□□ -1
SHROOM3-206ENST00000484236 MAP3K15Q6ZN16 1313 aa8.82□□□□□ -1
SHROOM3-206ENST00000484236 NCLP19338 710 aaKnown RBP8.82□□□□□ -1
SHROOM3-206ENST00000484236 CSPP1Q1MSJ5 1256 aa8.82□□□□□ -1
SHROOM3-206ENST00000484236 MCMDC2Q4G0Z9 681 aa8.82□□□□□ -1
SHROOM3-206ENST00000484236 ZBTB38Q8NAP3 1195 aaPredicted RBP8.82□□□□□ -1
SHROOM3-206ENST00000484236 PIGBQ92521 554 aa8.82□□□□□ -1
SHROOM3-206ENST00000484236 JARID2Q92833 1246 aaPredicted RBP8.82□□□□□ -1
SHROOM3-206ENST00000484236 SYAP1Q96A49 352 aaPredicted RBP8.82□□□□□ -1
SHROOM3-206ENST00000484236 DBNDD2Q9BQY9 259 aa8.82□□□□□ -1
SHROOM3-206ENST00000484236 ZBTB3Q9H5J0 574 aa8.82□□□□□ -1
SHROOM3-206ENST00000484236 THRAP3Q9Y2W1 955 aaKnown RBP8.82□□□□□ -1
SHROOM3-206ENST00000484236 CHMP3Q9Y3E7 222 aa8.82□□□□□ -1
SHROOM3-206ENST00000484236 NRAPQ86VF7 1730 aa8.81□□□□□ -1
SHROOM3-206ENST00000484236 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.81□□□□□ -1
SHROOM3-206ENST00000484236 ERVV-1B6SEH8 477 aa8.81□□□□□ -1
SHROOM3-206ENST00000484236 EXOC5O00471 708 aa8.81□□□□□ -1
SHROOM3-206ENST00000484236 STX6O43752 255 aa8.81□□□□□ -1
SHROOM3-206ENST00000484236 CSF1RP07333 972 aa8.81□□□□□ -1
SHROOM3-206ENST00000484236 HMGB1P09429 215 aaKnown RBP8.81□□□□□ -1
SHROOM3-206ENST00000484236 ZSCAN22P10073 491 aaPredicted RBP8.81□□□□□ -1
SHROOM3-206ENST00000484236 PDCP20941 246 aa8.81□□□□□ -1
SHROOM3-206ENST00000484236 RPS6KB1P23443 525 aa8.81□□□□□ -1
SHROOM3-206ENST00000484236 CCDC57Q2TAC2 916 aa8.81□□□□□ -1
SHROOM3-206ENST00000484236 ADCK5Q3MIX3 580 aa8.81□□□□□ -1
SHROOM3-206ENST00000484236 ZSCAN23Q3MJ62 389 aa8.81□□□□□ -1
SHROOM3-206ENST00000484236 GIGYF2Q6Y7W6 1299 aaKnown RBP8.81□□□□□ -1
SHROOM3-206ENST00000484236 NOL8Q76FK4 1167 aaKnown RBP8.81□□□□□ -1
SHROOM3-206ENST00000484236 DNAJC10Q8IXB1 793 aa8.81□□□□□ -1
SHROOM3-206ENST00000484236 CHMP4CQ96CF2 233 aa8.81□□□□□ -1
SHROOM3-206ENST00000484236 PAG1Q9NWQ8 432 aa8.81□□□□□ -1
SHROOM3-206ENST00000484236 CEP126Q9P2H0 1117 aa8.81□□□□□ -1
SHROOM3-206ENST00000484236 ASAP1Q9ULH1 1129 aa8.81□□□□□ -1
SHROOM3-206ENST00000484236 NUP98P52948 1817 aa8.81□□□□□ -1
SHROOM3-206ENST00000484236 NWD2Q9ULI1 1742 aa8.8□□□□□ -1
SHROOM3-206ENST00000484236 MYH7P12883 1935 aa8.8□□□□□ -1
SHROOM3-206ENST00000484236 TCHHQ07283 1943 aa8.8□□□□□ -1
SHROOM3-206ENST00000484236 PHF14O94880 888 aa8.8□□□□□ -1
SHROOM3-206ENST00000484236 ZFYP08048 801 aaPredicted RBP8.8□□□□□ -1
SHROOM3-206ENST00000484236 SYT1P21579 422 aa8.8□□□□□ -1
SHROOM3-206ENST00000484236 IL6STP40189 918 aaPredicted RBP8.8□□□□□ -1
SHROOM3-206ENST00000484236 CAVIN1Q6NZI2 390 aaKnown RBP8.8□□□□□ -1
SHROOM3-206ENST00000484236 GAS2L3Q86XJ1 694 aa8.8□□□□□ -1
SHROOM3-206ENST00000484236 GPT2Q8TD30 523 aa8.8□□□□□ -1
SHROOM3-206ENST00000484236 ANP32BQ92688 251 aaKnown RBP8.8□□□□□ -1
SHROOM3-206ENST00000484236 AK7Q96M32 723 aa8.8□□□□□ -1
SHROOM3-206ENST00000484236 NEUROD6Q96NK8 337 aa8.8□□□□□ -1
SHROOM3-206ENST00000484236 DNAJC2Q99543 621 aaKnown RBP8.8□□□□□ -1
SHROOM3-206ENST00000484236 DSCC1Q9BVC3 393 aa8.8□□□□□ -1
SHROOM3-206ENST00000484236 RREB1Q92766 1687 aa8.8□□□□□ -1
SHROOM3-206ENST00000484236 DOT1LQ8TEK3 1739 aa8.8□□□□□ -1
SHROOM3-206ENST00000484236 A0A1B0GUL7 405 aa8.79□□□□□ -1
SHROOM3-206ENST00000484236 LETM1O95202 739 aaPredicted RBP8.79□□□□□ -1
SHROOM3-206ENST00000484236 F13A1P00488 732 aa8.79□□□□□ -1
SHROOM3-206ENST00000484236 IFIT1P09914 478 aaKnown RBP8.79□□□□□ -1
SHROOM3-206ENST00000484236 CYP19A1P11511 503 aaPredicted RBP8.79□□□□□ -1
SHROOM3-206ENST00000484236 CCDC173Q0VFZ6 552 aa8.79□□□□□ -1
SHROOM3-206ENST00000484236 IFIT5Q13325 482 aaKnown RBP8.79□□□□□ -1
SHROOM3-206ENST00000484236 ME3Q16798 604 aa8.79□□□□□ -1
SHROOM3-206ENST00000484236 CCDC158Q5M9N0 1113 aa8.79□□□□□ -1
SHROOM3-206ENST00000484236 ZMYM1Q5SVZ6 1142 aa8.79□□□□□ -1
SHROOM3-206ENST00000484236 ZNF589Q86UQ0 364 aaPredicted RBP8.79□□□□□ -1
SHROOM3-206ENST00000484236 MS4A3Q96HJ5 214 aa8.79□□□□□ -1
SHROOM3-206ENST00000484236 NEK1Q96PY6 1258 aa8.79□□□□□ -1
SHROOM3-206ENST00000484236 ZNF831Q5JPB2 1677 aa8.78□□□□□ -1
SHROOM3-206ENST00000484236 LAMA4Q16363 1823 aa8.78□□□□□ -1
SHROOM3-206ENST00000484236 RNF113AO15541 343 aaKnown RBP8.78□□□□□ -1
SHROOM3-206ENST00000484236 HSP90B1P14625 803 aaKnown RBP8.78□□□□□ -1
SHROOM3-206ENST00000484236 GJB2P29033 226 aa8.78□□□□□ -1
SHROOM3-206ENST00000484236 NASPP49321 788 aaPredicted RBP8.78□□□□□ -1
SHROOM3-206ENST00000484236 LRRC24Q50LG9 513 aa8.78□□□□□ -1
SHROOM3-206ENST00000484236 TAF7LQ5H9L4 462 aa8.78□□□□□ -1
SHROOM3-206ENST00000484236 LRSAM1Q6UWE0 723 aa8.78□□□□□ -1
SHROOM3-206ENST00000484236 NLRP10Q86W26 655 aa8.78□□□□□ -1
SHROOM3-206ENST00000484236 CCDC83Q8IWF9 413 aa8.78□□□□□ -1
SHROOM3-206ENST00000484236 ZNF512BQ96KM6 892 aaPredicted RBP8.78□□□□□ -1
SHROOM3-206ENST00000484236 PPP1R9BQ96SB3 815 aa8.78□□□□□ -1
SHROOM3-206ENST00000484236 TPCN1Q9ULQ1 816 aa8.78□□□□□ -1
SHROOM3-206ENST00000484236 MTMR6Q9Y217 621 aa8.78□□□□□ -1
SHROOM3-206ENST00000484236 PHLPP1O60346 1717 aa8.77□□□□□ -1
SHROOM3-206ENST00000484236 LTBP4Q8N2S1 1624 aa8.77□□□□□ -1.01
SHROOM3-206ENST00000484236 ANKRD18BA2A2Z9 1011 aa8.77□□□□□ -1.01
SHROOM3-206ENST00000484236 GOLIM4O00461 696 aa8.77□□□□□ -1.01
SHROOM3-206ENST00000484236 LARGE1O95461 756 aa8.77□□□□□ -1.01
SHROOM3-206ENST00000484236 CPA1P15085 419 aa8.77□□□□□ -1.01
SHROOM3-206ENST00000484236 TIMM10P62072 90 aa8.77□□□□□ -1.01
SHROOM3-206ENST00000484236 UBE2HP62256 183 aa8.77□□□□□ -1.01
SHROOM3-206ENST00000484236 TOB2Q14106 344 aaPredicted RBP8.77□□□□□ -1.01
SHROOM3-206ENST00000484236 TTC39AQ5SRH9 613 aa8.77□□□□□ -1.01
SHROOM3-206ENST00000484236 DDX46Q7L014 1031 aaKnown RBP8.77□□□□□ -1.01
SHROOM3-206ENST00000484236 USP48Q86UV5 1035 aa8.77□□□□□ -1.01
SHROOM3-206ENST00000484236 FBXL16Q8N461 479 aa8.77□□□□□ -1.01
SHROOM3-206ENST00000484236 EDC3Q96F86 508 aaKnown RBP8.77□□□□□ -1.01
SHROOM3-206ENST00000484236 LLPHQ9BRT6 129 aaKnown RBP8.77□□□□□ -1.01
SHROOM3-206ENST00000484236 PANK2Q9BZ23 570 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms