RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 AXDND1Q5T1B0 1012 aaPredicted RBP6.57□□□□□ -1.36
R3HDM1-216ENST00000483065 LIAT1Q6ZQX7 453 aa6.57□□□□□ -1.36
R3HDM1-216ENST00000483065 PCGF5Q86SE9 256 aa6.57□□□□□ -1.36
R3HDM1-216ENST00000483065 SLC10A4Q96EP9 437 aa6.57□□□□□ -1.36
R3HDM1-216ENST00000483065 IL17RAQ96F46 866 aa6.57□□□□□ -1.36
R3HDM1-216ENST00000483065 NAP1L5Q96NT1 182 aaPredicted RBP6.57□□□□□ -1.36
R3HDM1-216ENST00000483065 MPHOSPH6Q99547 160 aaKnown RBP6.57□□□□□ -1.36
R3HDM1-216ENST00000483065 MTA3Q9BTC8 594 aa6.57□□□□□ -1.36
R3HDM1-216ENST00000483065 NOC4LQ9BVI4 516 aaKnown RBP6.57□□□□□ -1.36
R3HDM1-216ENST00000483065 FBXO9Q9UK97 447 aaPredicted RBP6.57□□□□□ -1.36
R3HDM1-216ENST00000483065 ESYT3A0FGR9 886 aa6.56□□□□□ -1.36
R3HDM1-216ENST00000483065 CCDC85CA6NKD9 419 aa6.56□□□□□ -1.36
R3HDM1-216ENST00000483065 EXOC5O00471 708 aa6.56□□□□□ -1.36
R3HDM1-216ENST00000483065 CD53P19397 219 aa6.56□□□□□ -1.36
R3HDM1-216ENST00000483065 DNM1Q05193 864 aaKnown RBP6.56□□□□□ -1.36
R3HDM1-216ENST00000483065 FOXD4Q12950 439 aaPredicted RBP6.56□□□□□ -1.36
R3HDM1-216ENST00000483065 THAP3Q8WTV1 239 aaPredicted RBP6.56□□□□□ -1.36
R3HDM1-216ENST00000483065 CHAC2Q8WUX2 184 aa6.56□□□□□ -1.36
R3HDM1-216ENST00000483065 MYO19Q96H55 970 aa6.56□□□□□ -1.36
R3HDM1-216ENST00000483065 RSRP1Q9BUV0 290 aa6.56□□□□□ -1.36
R3HDM1-216ENST00000483065 SENP2Q9HC62 589 aa6.56□□□□□ -1.36
R3HDM1-216ENST00000483065 ATP13A2Q9NQ11 1180 aa6.56□□□□□ -1.36
R3HDM1-216ENST00000483065 SFMBT1Q9UHJ3 866 aa6.56□□□□□ -1.36
R3HDM1-216ENST00000483065 EFR3BQ9Y2G0 817 aa6.56□□□□□ -1.36
R3HDM1-216ENST00000483065 ATP8A1Q9Y2Q0 1164 aa6.56□□□□□ -1.36
R3HDM1-216ENST00000483065 WASLO00401 505 aaPredicted RBP6.55□□□□□ -1.36
R3HDM1-216ENST00000483065 ACTN4O43707 911 aaKnown RBP6.55□□□□□ -1.36
R3HDM1-216ENST00000483065 CPEP16870 476 aa6.55□□□□□ -1.36
R3HDM1-216ENST00000483065 SOX5P35711 763 aa6.55□□□□□ -1.36
R3HDM1-216ENST00000483065 ETFBP38117 255 aa6.55□□□□□ -1.36
R3HDM1-216ENST00000483065 SOX9P48436 509 aa6.55□□□□□ -1.36
R3HDM1-216ENST00000483065 RAPGEF1Q13905 1077 aa6.55□□□□□ -1.36
R3HDM1-216ENST00000483065 RASGRF1Q13972 1273 aa6.55□□□□□ -1.36
R3HDM1-216ENST00000483065 CT47A1Q5JQC4 288 aaPredicted RBP6.55□□□□□ -1.36
R3HDM1-216ENST00000483065 COX20Q5RI15 118 aa6.55□□□□□ -1.36
R3HDM1-216ENST00000483065 WWC2Q6AWC2 1192 aa6.55□□□□□ -1.36
R3HDM1-216ENST00000483065 STK11IPQ8N1F8 1099 aa6.55□□□□□ -1.36
R3HDM1-216ENST00000483065 FBXO41Q8TF61 875 aa6.55□□□□□ -1.36
R3HDM1-216ENST00000483065 DNAJC7Q99615 494 aa6.55□□□□□ -1.36
R3HDM1-216ENST00000483065 NUDT12Q9BQG2 462 aa6.55□□□□□ -1.36
R3HDM1-216ENST00000483065 OCSTAMPQ9BR26 566 aa6.55□□□□□ -1.36
R3HDM1-216ENST00000483065 CFHR5Q9BXR6 569 aa6.55□□□□□ -1.36
R3HDM1-216ENST00000483065 SAP130Q9H0E3 1048 aa6.55□□□□□ -1.36
R3HDM1-216ENST00000483065 PPP4R2Q9NY27 417 aa6.55□□□□□ -1.36
R3HDM1-216ENST00000483065 GOLGA6CA6NDK9 693 aa6.54□□□□□ -1.36
R3HDM1-216ENST00000483065 GOLGA6BA6NDN3 693 aa6.54□□□□□ -1.36
R3HDM1-216ENST00000483065 TNFRSF10BO14763 440 aa6.54□□□□□ -1.36
R3HDM1-216ENST00000483065 PDPK1O15530 556 aa6.54□□□□□ -1.36
R3HDM1-216ENST00000483065 TSPAN6O43657 245 aa6.54□□□□□ -1.36
R3HDM1-216ENST00000483065 RNF40O75150 1001 aa6.54□□□□□ -1.36
R3HDM1-216ENST00000483065 GOLGA6DP0CG33 693 aa6.54□□□□□ -1.36
R3HDM1-216ENST00000483065 NFE2Q16621 373 aaPredicted RBP6.54□□□□□ -1.36
R3HDM1-216ENST00000483065 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.54□□□□□ -1.36
R3HDM1-216ENST00000483065 LCE1DQ5T752 114 aa6.54□□□□□ -1.36
R3HDM1-216ENST00000483065 DIEXFQ68CQ4 756 aaKnown RBP6.54□□□□□ -1.36
R3HDM1-216ENST00000483065 BRICD5Q6PL45 260 aa6.54□□□□□ -1.36
R3HDM1-216ENST00000483065 BPHLQ86WA6 291 aaPredicted RBP6.54□□□□□ -1.36
R3HDM1-216ENST00000483065 NPAS3Q8IXF0 933 aa6.54□□□□□ -1.36
R3HDM1-216ENST00000483065 SRRTQ9BXP5 876 aaKnown RBP6.54□□□□□ -1.36
R3HDM1-216ENST00000483065 PRDM10Q9NQV6 1147 aa6.54□□□□□ -1.36
R3HDM1-216ENST00000483065 GOLGA6AQ9NYA3 693 aa6.54□□□□□ -1.36
R3HDM1-216ENST00000483065 MRVI1Q9Y6F6 885 aa6.54□□□□□ -1.36
R3HDM1-216ENST00000483065 FAM221BA6H8Z2 402 aa6.53□□□□□ -1.36
R3HDM1-216ENST00000483065 RNF225M0QZC1 329 aaPredicted RBP6.53□□□□□ -1.36
R3HDM1-216ENST00000483065 NRDCO43847 1150 aa6.53□□□□□ -1.36
R3HDM1-216ENST00000483065 ALDH1L1O75891 902 aa6.53□□□□□ -1.36
R3HDM1-216ENST00000483065 KIF4AO95239 1232 aa6.53□□□□□ -1.36
R3HDM1-216ENST00000483065 PDGFAP04085 211 aa6.53□□□□□ -1.36
R3HDM1-216ENST00000483065 MCCP23508 829 aa6.53□□□□□ -1.36
R3HDM1-216ENST00000483065 PSMA6P60900 246 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-216ENST00000483065 C2orf27AQ580R0 203 aa6.53□□□□□ -1.36
R3HDM1-216ENST00000483065 BRDTQ58F21 947 aaPredicted RBP6.53□□□□□ -1.36
R3HDM1-216ENST00000483065 SH3BP5LQ7L8J4 393 aa6.53□□□□□ -1.36
R3HDM1-216ENST00000483065 HNRNPLLQ8WVV9 542 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-216ENST00000483065 EDEM1Q92611 657 aa6.53□□□□□ -1.36
R3HDM1-216ENST00000483065 ANAPC16Q96DE5 110 aa6.53□□□□□ -1.36
R3HDM1-216ENST00000483065 RBSNQ9H1K0 784 aa6.53□□□□□ -1.36
R3HDM1-216ENST00000483065 ARNT2Q9HBZ2 717 aa6.53□□□□□ -1.36
R3HDM1-216ENST00000483065 KBTBD4Q9NVX7 518 aa6.53□□□□□ -1.36
R3HDM1-216ENST00000483065 CNTN3Q9P232 1028 aa6.53□□□□□ -1.36
R3HDM1-216ENST00000483065 THRAP3Q9Y2W1 955 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-216ENST00000483065 MSRB2Q9Y3D2 182 aa6.53□□□□□ -1.36
R3HDM1-216ENST00000483065 MAGEB6P1A0A0J9YX57 407 aa6.52□□□□□ -1.37
R3HDM1-216ENST00000483065 E2F8A0AVK6 867 aa6.52□□□□□ -1.37
R3HDM1-216ENST00000483065 ANP32CO43423 234 aa6.52□□□□□ -1.37
R3HDM1-216ENST00000483065 USP17L7P0C7H9 530 aa6.52□□□□□ -1.37
R3HDM1-216ENST00000483065 ATF3P18847 181 aa6.52□□□□□ -1.37
R3HDM1-216ENST00000483065 AGERQ15109 404 aa6.52□□□□□ -1.37
R3HDM1-216ENST00000483065 L1TD1Q5T7N2 865 aaKnown RBP6.52□□□□□ -1.37
R3HDM1-216ENST00000483065 PGBD3Q8N328 593 aa6.52□□□□□ -1.37
R3HDM1-216ENST00000483065 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.52□□□□□ -1.37
R3HDM1-216ENST00000483065 NT5C1AQ9BXI3 368 aa6.52□□□□□ -1.37
R3HDM1-216ENST00000483065 CARD14Q9BXL6 1004 aa6.52□□□□□ -1.37
R3HDM1-216ENST00000483065 TMX4Q9H1E5 349 aaPredicted RBP6.52□□□□□ -1.37
R3HDM1-216ENST00000483065 AVENQ9NQS1 362 aaPredicted RBP6.52□□□□□ -1.37
R3HDM1-216ENST00000483065 PKD2L1Q9P0L9 805 aa6.52□□□□□ -1.37
R3HDM1-216ENST00000483065 SCINQ9Y6U3 715 aa6.52□□□□□ -1.37
R3HDM1-216ENST00000483065 ERBB4Q15303 1308 aa6.51□□□□□ -1.37
R3HDM1-216ENST00000483065 CALRP27797 417 aaKnown RBP6.51□□□□□ -1.37
R3HDM1-216ENST00000483065 EIF4A3P38919 411 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms