RNA–Protein interactions for RNA: ENST00000482071.1

NCK1-208, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-208ENST00000482071 HOXB7P09629 217 aa8.11□□□□□ -1.11
NCK1-208ENST00000482071 TWISTNBQ3B726 338 aaPredicted RBP8.11□□□□□ -1.11
NCK1-208ENST00000482071 C20orf194Q5TEA3 1177 aa8.11□□□□□ -1.11
NCK1-208ENST00000482071 ZNF530Q6P9A1 599 aaPredicted RBP8.11□□□□□ -1.11
NCK1-208ENST00000482071 LARP1Q6PKG0 1096 aaKnown RBP8.11□□□□□ -1.11
NCK1-208ENST00000482071 IFNL2Q8IZJ0 200 aa8.11□□□□□ -1.11
NCK1-208ENST00000482071 FNBP4Q8N3X1 1017 aaPredicted RBP8.11□□□□□ -1.11
NCK1-208ENST00000482071 STK17AQ9UEE5 414 aa8.11□□□□□ -1.11
NCK1-208ENST00000482071 GLI3P10071 1580 aa8.1□□□□□ -1.11
NCK1-208ENST00000482071 SPATA31A6Q5VVP1 1343 aa8.1□□□□□ -1.11
NCK1-208ENST00000482071 TOGARAM1Q9Y4F4 1720 aa8.1□□□□□ -1.11
NCK1-208ENST00000482071 ZBTB7CA1YPR0 619 aa8.1□□□□□ -1.11
NCK1-208ENST00000482071 F12P00748 615 aaPredicted RBP8.1□□□□□ -1.11
NCK1-208ENST00000482071 IL2RBP14784 551 aa8.1□□□□□ -1.11
NCK1-208ENST00000482071 EIF4A1P60842 406 aaKnown RBP8.1□□□□□ -1.11
NCK1-208ENST00000482071 EXOC6Q8TAG9 804 aa8.1□□□□□ -1.11
NCK1-208ENST00000482071 DCAF5Q96JK2 942 aa8.1□□□□□ -1.11
NCK1-208ENST00000482071 BTG4Q9NY30 223 aa8.1□□□□□ -1.11
NCK1-208ENST00000482071 THRAP3Q9Y2W1 955 aaKnown RBP8.1□□□□□ -1.11
NCK1-208ENST00000482071 ITGB4P16144 1822 aa8.1□□□□□ -1.11
NCK1-208ENST00000482071 KIF16BQ96L93 1317 aa8.09□□□□□ -1.11
NCK1-208ENST00000482071 BCL9LQ86UU0 1499 aa8.09□□□□□ -1.11
NCK1-208ENST00000482071 HSP90AB1P08238 724 aaKnown RBP8.09□□□□□ -1.11
NCK1-208ENST00000482071 IRX6P78412 446 aaPredicted RBP8.09□□□□□ -1.11
NCK1-208ENST00000482071 C1orf141Q5JVX7 400 aa8.09□□□□□ -1.11
NCK1-208ENST00000482071 ATF7IPQ6VMQ6 1270 aa8.09□□□□□ -1.11
NCK1-208ENST00000482071 TOM1L2Q6ZVM7 507 aa8.09□□□□□ -1.11
NCK1-208ENST00000482071 ZCRB1Q8TBF4 217 aaKnown RBP8.09□□□□□ -1.11
NCK1-208ENST00000482071 NXF1Q9UBU9 619 aaKnown RBP8.09□□□□□ -1.11
NCK1-208ENST00000482071 TSPYL4Q9UJ04 414 aa8.09□□□□□ -1.11
NCK1-208ENST00000482071 SPATA31A1Q5TZJ5 1347 aa8.08□□□□□ -1.12
NCK1-208ENST00000482071 ERVV-2B6SEH9 535 aa8.08□□□□□ -1.12
NCK1-208ENST00000482071 CSB-PGBD3P0DP91 1061 aa8.08□□□□□ -1.12
NCK1-208ENST00000482071 RLBP1P12271 317 aa8.08□□□□□ -1.12
NCK1-208ENST00000482071 EVA1CP58658 441 aa8.08□□□□□ -1.12
NCK1-208ENST00000482071 PIP4K2BP78356 416 aa8.08□□□□□ -1.12
NCK1-208ENST00000482071 NNTQ13423 1086 aa8.08□□□□□ -1.12
NCK1-208ENST00000482071 KRT24Q2M2I5 525 aa8.08□□□□□ -1.12
NCK1-208ENST00000482071 PRPF38BQ5VTL8 546 aaKnown RBP8.08□□□□□ -1.12
NCK1-208ENST00000482071 ZKSCAN2Q63HK3 967 aa8.08□□□□□ -1.12
NCK1-208ENST00000482071 MPRIPQ6WCQ1 1025 aa8.08□□□□□ -1.12
NCK1-208ENST00000482071 NPAS3Q8IXF0 933 aa8.08□□□□□ -1.12
NCK1-208ENST00000482071 CRBNQ96SW2 442 aa8.08□□□□□ -1.12
NCK1-208ENST00000482071 CDCA7Q9BWT1 371 aaPredicted RBP8.08□□□□□ -1.12
NCK1-208ENST00000482071 KLF16Q9BXK1 252 aaPredicted RBP8.08□□□□□ -1.12
NCK1-208ENST00000482071 ZBTB3Q9H5J0 574 aa8.08□□□□□ -1.12
NCK1-208ENST00000482071 SLC52A2Q9HAB3 445 aa8.08□□□□□ -1.12
NCK1-208ENST00000482071 LAS1LQ9Y4W2 734 aaKnown RBP8.08□□□□□ -1.12
NCK1-208ENST00000482071 RGS12O14924 1447 aa8.08□□□□□ -1.12
NCK1-208ENST00000482071 SPATA31A5Q5VU36 1347 aa8.07□□□□□ -1.12
NCK1-208ENST00000482071 SPATA31A7Q8IWB4 1347 aa8.07□□□□□ -1.12
NCK1-208ENST00000482071 PCDH11XQ9BZA7 1347 aa8.07□□□□□ -1.12
NCK1-208ENST00000482071 PCDH11YQ9BZA8 1340 aa8.07□□□□□ -1.12
NCK1-208ENST00000482071 IPO8O15397 1037 aaKnown RBP8.07□□□□□ -1.12
NCK1-208ENST00000482071 TRIM27P14373 513 aa8.07□□□□□ -1.12
NCK1-208ENST00000482071 ZFP42Q96MM3 310 aa8.07□□□□□ -1.12
NCK1-208ENST00000482071 CHMP4AQ9BY43 222 aa8.07□□□□□ -1.12
NCK1-208ENST00000482071 SMC4Q9NTJ3 1288 aa8.07□□□□□ -1.12
NCK1-208ENST00000482071 MIS18AQ9NYP9 233 aa8.07□□□□□ -1.12
NCK1-208ENST00000482071 MAP10Q9P2G4 905 aa8.07□□□□□ -1.12
NCK1-208ENST00000482071 NOB1Q9ULX3 412 aaKnown RBP8.07□□□□□ -1.12
NCK1-208ENST00000482071 C5P01031 1676 aa8.07□□□□□ -1.12
NCK1-208ENST00000482071 LAMB4A4D0S4 1761 aa8.07□□□□□ -1.12
NCK1-208ENST00000482071 CICQ96RK0 1608 aaPredicted RBP8.07□□□□□ -1.12
NCK1-208ENST00000482071 ABCC4O15439 1325 aa8.06□□□□□ -1.12
NCK1-208ENST00000482071 PTPRCP08575 1304 aa8.06□□□□□ -1.12
NCK1-208ENST00000482071 TNS2Q63HR2 1409 aa8.06□□□□□ -1.12
NCK1-208ENST00000482071 BTBD11A6QL63 1104 aa8.06□□□□□ -1.12
NCK1-208ENST00000482071 GIGYF1O75420 1035 aaPredicted RBP8.06□□□□□ -1.12
NCK1-208ENST00000482071 TIMP2P16035 220 aa8.06□□□□□ -1.12
NCK1-208ENST00000482071 CTHP32929 405 aa8.06□□□□□ -1.12
NCK1-208ENST00000482071 TEFQ10587 303 aa8.06□□□□□ -1.12
NCK1-208ENST00000482071 VPS72Q15906 364 aa8.06□□□□□ -1.12
NCK1-208ENST00000482071 RIC3Q7Z5B4 369 aa8.06□□□□□ -1.12
NCK1-208ENST00000482071 DZIP1LQ8IYY4 767 aaKnown RBP8.06□□□□□ -1.12
NCK1-208ENST00000482071 AK7Q96M32 723 aa8.06□□□□□ -1.12
NCK1-208ENST00000482071 CDK15Q96Q40 435 aa8.06□□□□□ -1.12
NCK1-208ENST00000482071 TNNQ9UQP3 1299 aa8.06□□□□□ -1.12
NCK1-208ENST00000482071 IBTKQ9P2D0 1353 aaPredicted RBP8.06□□□□□ -1.12
NCK1-208ENST00000482071 KDM2BQ8NHM5 1336 aa8.05□□□□□ -1.12
NCK1-208ENST00000482071 ZNF831Q5JPB2 1677 aa8.05□□□□□ -1.12
NCK1-208ENST00000482071 THSD7AQ9UPZ6 1657 aa8.05□□□□□ -1.12
NCK1-208ENST00000482071 KCPQ6ZWJ8 1503 aa8.05□□□□□ -1.12
NCK1-208ENST00000482071 KCNQ3O43525 872 aa8.05□□□□□ -1.12
NCK1-208ENST00000482071 ADH1CP00326 375 aa8.05□□□□□ -1.12
NCK1-208ENST00000482071 MVPQ14764 893 aaKnown RBP8.05□□□□□ -1.12
NCK1-208ENST00000482071 INTS3Q68E01 1043 aaKnown RBP8.05□□□□□ -1.12
NCK1-208ENST00000482071 ZNF790Q6PG37 636 aa8.05□□□□□ -1.12
NCK1-208ENST00000482071 UNC5CLQ8IV45 518 aa8.05□□□□□ -1.12
NCK1-208ENST00000482071 NFATC2IPQ8NCF5 419 aa8.05□□□□□ -1.12
NCK1-208ENST00000482071 FAM174AQ8TBP5 190 aa8.05□□□□□ -1.12
NCK1-208ENST00000482071 PANK1Q8TE04 598 aa8.05□□□□□ -1.12
NCK1-208ENST00000482071 SLC16A10Q8TF71 515 aa8.05□□□□□ -1.12
NCK1-208ENST00000482071 STRN4Q9NRL3 753 aa8.05□□□□□ -1.12
NCK1-208ENST00000482071 ELL2O00472 640 aaPredicted RBP8.04□□□□□ -1.12
NCK1-208ENST00000482071 ZBTB7BO15156 539 aaPredicted RBP8.04□□□□□ -1.12
NCK1-208ENST00000482071 HSPA1LP34931 641 aa8.04□□□□□ -1.12
NCK1-208ENST00000482071 TUSC1Q2TAM9 212 aa8.04□□□□□ -1.12
NCK1-208ENST00000482071 CCDC30Q5VVM6 783 aa8.04□□□□□ -1.12
NCK1-208ENST00000482071 MRPL14Q6P1L8 145 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms