RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 PRR5LQ6MZQ0 368 aa5.46□□□□□ -1.54
VPS13D-208ENST00000481484 DZIP3Q86Y13 1208 aaKnown RBP5.46□□□□□ -1.54
VPS13D-208ENST00000481484 C2CD5Q86YS7 1000 aa5.46□□□□□ -1.54
VPS13D-208ENST00000481484 ZNF526Q8TF50 670 aaPredicted RBP5.46□□□□□ -1.54
VPS13D-208ENST00000481484 SETDB2Q96T68 719 aa5.46□□□□□ -1.54
VPS13D-208ENST00000481484 NYXQ9GZU5 481 aa5.46□□□□□ -1.54
VPS13D-208ENST00000481484 TAOK3Q9H2K8 898 aa5.46□□□□□ -1.54
VPS13D-208ENST00000481484 WWC3Q9ULE0 1092 aa5.46□□□□□ -1.54
VPS13D-208ENST00000481484 ADAMTSL1Q8N6G6 1762 aa5.46□□□□□ -1.54
VPS13D-208ENST00000481484 MYBBP1AQ9BQG0 1328 aaKnown RBP5.46□□□□□ -1.54
VPS13D-208ENST00000481484 TRPM7Q96QT4 1865 aa5.45□□□□□ -1.54
VPS13D-208ENST00000481484 CHRNA5P30532 468 aa5.45□□□□□ -1.54
VPS13D-208ENST00000481484 GRIPAP1Q4V328 841 aa5.45□□□□□ -1.54
VPS13D-208ENST00000481484 TBC1D9BQ66K14 1250 aa5.45□□□□□ -1.54
VPS13D-208ENST00000481484 KIF6Q6ZMV9 814 aa5.45□□□□□ -1.54
VPS13D-208ENST00000481484 NBPF5PQ86XG9 351 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-208ENST00000481484 SMC1BQ8NDV3 1235 aa5.45□□□□□ -1.54
VPS13D-208ENST00000481484 MASTLQ96GX5 879 aa5.45□□□□□ -1.54
VPS13D-208ENST00000481484 PHACTR3Q96KR7 559 aa5.45□□□□□ -1.54
VPS13D-208ENST00000481484 ZNF330Q9Y3S2 320 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-208ENST00000481484 THSD7BQ9C0I4 1608 aa5.45□□□□□ -1.54
VPS13D-208ENST00000481484 PSME4Q14997 1843 aa5.44□□□□□ -1.54
VPS13D-208ENST00000481484 GLTPD2A6NH11 291 aa5.44□□□□□ -1.54
VPS13D-208ENST00000481484 ERVV-1B6SEH8 477 aa5.44□□□□□ -1.54
VPS13D-208ENST00000481484 NFKBIEO00221 500 aa5.44□□□□□ -1.54
VPS13D-208ENST00000481484 OATP04181 439 aa5.44□□□□□ -1.54
VPS13D-208ENST00000481484 SRGNP10124 158 aa5.44□□□□□ -1.54
VPS13D-208ENST00000481484 NPR1P16066 1061 aa5.44□□□□□ -1.54
VPS13D-208ENST00000481484 FECHP22830 423 aa5.44□□□□□ -1.54
VPS13D-208ENST00000481484 DNAJB2P25686 324 aa5.44□□□□□ -1.54
VPS13D-208ENST00000481484 KCNC4Q03721 635 aa5.44□□□□□ -1.54
VPS13D-208ENST00000481484 TAF7Q15545 349 aaPredicted RBP5.44□□□□□ -1.54
VPS13D-208ENST00000481484 FAM161AQ3B820 660 aa5.44□□□□□ -1.54
VPS13D-208ENST00000481484 CCDC93Q567U6 631 aa5.44□□□□□ -1.54
VPS13D-208ENST00000481484 PRPF40BQ6NWY9 871 aaKnown RBP5.44□□□□□ -1.54
VPS13D-208ENST00000481484 MCM10Q7L590 875 aa5.44□□□□□ -1.54
VPS13D-208ENST00000481484 SLF2Q8IX21 1173 aa5.44□□□□□ -1.54
VPS13D-208ENST00000481484 PXYLP1Q8TE99 480 aa5.44□□□□□ -1.54
VPS13D-208ENST00000481484 SNED1Q8TER0 1413 aa5.44□□□□□ -1.54
VPS13D-208ENST00000481484 NECTIN2Q92692 538 aa5.44□□□□□ -1.54
VPS13D-208ENST00000481484 TMEM134Q9H6X4 195 aa5.44□□□□□ -1.54
VPS13D-208ENST00000481484 NMRK2Q9NPI5 230 aa5.44□□□□□ -1.54
VPS13D-208ENST00000481484 MAP3K15Q6ZN16 1313 aa5.44□□□□□ -1.54
VPS13D-208ENST00000481484 ABCC12Q96J65 1359 aa5.43□□□□□ -1.54
VPS13D-208ENST00000481484 KLRG2A4D1S0 409 aaPredicted RBP5.43□□□□□ -1.54
VPS13D-208ENST00000481484 IQCA1LA6NCM1 817 aa5.43□□□□□ -1.54
VPS13D-208ENST00000481484 RCCD1A6NED2 376 aa5.43□□□□□ -1.54
VPS13D-208ENST00000481484 A1BGP04217 495 aa5.43□□□□□ -1.54
VPS13D-208ENST00000481484 HOXB7P09629 217 aa5.43□□□□□ -1.54
VPS13D-208ENST00000481484 VEGFAP15692 232 aaPredicted RBP5.43□□□□□ -1.54
VPS13D-208ENST00000481484 RASSF7Q02833 373 aa5.43□□□□□ -1.54
VPS13D-208ENST00000481484 PARP10Q53GL7 1025 aa5.43□□□□□ -1.54
VPS13D-208ENST00000481484 HSP90AB3PQ58FF7 597 aa5.43□□□□□ -1.54
VPS13D-208ENST00000481484 TJAP1Q5JTD0 557 aa5.43□□□□□ -1.54
VPS13D-208ENST00000481484 CC2D2BQ6DHV5 1058 aa5.43□□□□□ -1.54
VPS13D-208ENST00000481484 TPTE2Q6XPS3 522 aa5.43□□□□□ -1.54
VPS13D-208ENST00000481484 BICDL1Q6ZP65 573 aa5.43□□□□□ -1.54
VPS13D-208ENST00000481484 RTKN2Q8IZC4 609 aa5.43□□□□□ -1.54
VPS13D-208ENST00000481484 ZNF622Q969S3 477 aaKnown RBP eCLIP5.43□□□□□ -1.54
VPS13D-208ENST00000481484 PLEKHF1Q96S99 279 aa5.43□□□□□ -1.54
VPS13D-208ENST00000481484 CHMP4AQ9BY43 222 aa5.43□□□□□ -1.54
VPS13D-208ENST00000481484 TBC1D2BQ9UPU7 963 aa5.43□□□□□ -1.54
VPS13D-208ENST00000481484 NIP7Q9Y221 180 aaKnown RBP eCLIP5.43□□□□□ -1.54
VPS13D-208ENST00000481484 LTBP1Q14766 1721 aa5.43□□□□□ -1.54
VPS13D-208ENST00000481484 RGS20O76081 388 aa5.42□□□□□ -1.54
VPS13D-208ENST00000481484 ALDH1B1P30837 517 aa5.42□□□□□ -1.54
VPS13D-208ENST00000481484 EIF4A1P60842 406 aaKnown RBP5.42□□□□□ -1.54
VPS13D-208ENST00000481484 FKBP4Q02790 459 aaKnown RBP eCLIP5.42□□□□□ -1.54
VPS13D-208ENST00000481484 CALD1Q05682 793 aaKnown RBP5.42□□□□□ -1.54
VPS13D-208ENST00000481484 CNGB1Q14028 1251 aaPredicted RBP5.42□□□□□ -1.54
VPS13D-208ENST00000481484 WDR43Q15061 677 aaKnown RBP eCLIP5.42□□□□□ -1.54
VPS13D-208ENST00000481484 CRY2Q49AN0 593 aa5.42□□□□□ -1.54
VPS13D-208ENST00000481484 ERFEQ4G0M1 354 aa5.42□□□□□ -1.54
VPS13D-208ENST00000481484 METTL3Q86U44 580 aaKnown RBP5.42□□□□□ -1.54
VPS13D-208ENST00000481484 PSMD1Q99460 953 aa5.42□□□□□ -1.54
VPS13D-208ENST00000481484 TSPYL4Q9UJ04 414 aa5.42□□□□□ -1.54
VPS13D-208ENST00000481484 TAF1P21675 1872 aa5.42□□□□□ -1.54
VPS13D-208ENST00000481484 CDHR2Q9BYE9 1310 aa5.42□□□□□ -1.54
VPS13D-208ENST00000481484 KCNQ3O43525 872 aa5.41□□□□□ -1.54
VPS13D-208ENST00000481484 GTF2E1P29083 439 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-208ENST00000481484 SLC4A3P48751 1232 aa5.41□□□□□ -1.54
VPS13D-208ENST00000481484 NBPF10Q6P3W6 841 aaKnown RBP5.41□□□□□ -1.54
VPS13D-208ENST00000481484 GIGYF2Q6Y7W6 1299 aaKnown RBP5.41□□□□□ -1.54
VPS13D-208ENST00000481484 TMC4Q7Z404 712 aa5.41□□□□□ -1.54
VPS13D-208ENST00000481484 PPP1R42Q7Z4L9 355 aa5.41□□□□□ -1.54
VPS13D-208ENST00000481484 GPIHBP1Q8IV16 184 aa5.41□□□□□ -1.54
VPS13D-208ENST00000481484 NBPF15Q8N660 670 aa5.41□□□□□ -1.54
VPS13D-208ENST00000481484 RPGRQ92834 1020 aaKnown RBP5.41□□□□□ -1.54
VPS13D-208ENST00000481484 KLRG1Q96E93 195 aa5.41□□□□□ -1.54
VPS13D-208ENST00000481484 USP16Q9Y5T5 823 aa5.41□□□□□ -1.54
VPS13D-208ENST00000481484 TULP1O00294 542 aaPredicted RBP5.4□□□□□ -1.54
VPS13D-208ENST00000481484 C21orf2O43822 256 aa5.4□□□□□ -1.54
VPS13D-208ENST00000481484 RNF40O75150 1001 aa5.4□□□□□ -1.54
VPS13D-208ENST00000481484 HSP90B1P14625 803 aaKnown RBP5.4□□□□□ -1.54
VPS13D-208ENST00000481484 HOXA10P31260 410 aaPredicted RBP5.4□□□□□ -1.54
VPS13D-208ENST00000481484 DCTN1Q14203 1278 aa5.4□□□□□ -1.54
VPS13D-208ENST00000481484 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.4□□□□□ -1.54
VPS13D-208ENST00000481484 LDHDQ86WU2 507 aa5.4□□□□□ -1.54
VPS13D-208ENST00000481484 JMYQ8N9B5 988 aa5.4□□□□□ -1.54
VPS13D-208ENST00000481484 MTRQ99707 1265 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms