RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 GIGYF2Q6Y7W6 1299 aaKnown RBP12.42□□□□□ -0.42
SMARCE1-210ENST00000481231 OTOP1Q7RTM1 612 aa12.42□□□□□ -0.42
SMARCE1-210ENST00000481231 UTP14AQ9BVJ6 771 aaKnown RBP12.42□□□□□ -0.42
SMARCE1-210ENST00000481231 LAMB2P55268 1798 aa12.41□□□□□ -0.42
SMARCE1-210ENST00000481231 LRRC37AA6NMS7 1700 aa12.41□□□□□ -0.42
SMARCE1-210ENST00000481231 PARP10Q53GL7 1025 aa12.41□□□□□ -0.42
SMARCE1-210ENST00000481231 INTS3Q68E01 1043 aaKnown RBP12.41□□□□□ -0.42
SMARCE1-210ENST00000481231 DDX46Q7L014 1031 aaKnown RBP12.41□□□□□ -0.42
SMARCE1-210ENST00000481231 ZNF428Q96B54 188 aa12.41□□□□□ -0.42
SMARCE1-210ENST00000481231 A0A0C4DFX4 3053 aa12.41□□□□□ -0.42
SMARCE1-210ENST00000481231 KDM3BQ7LBC6 1761 aa12.41□□□□□ -0.42
SMARCE1-210ENST00000481231 MAPK8IP3Q9UPT6 1336 aa12.4□□□□□ -0.42
SMARCE1-210ENST00000481231 H0YGN5 161 aa12.4□□□□□ -0.42
SMARCE1-210ENST00000481231 C6orf229H3BNL8 230 aa12.4□□□□□ -0.42
SMARCE1-210ENST00000481231 TTLL12Q14166 644 aaPredicted RBP12.4□□□□□ -0.42
SMARCE1-210ENST00000481231 OTUD5Q96G74 571 aa12.4□□□□□ -0.42
SMARCE1-210ENST00000481231 POLLQ9UGP5 575 aa12.4□□□□□ -0.42
SMARCE1-210ENST00000481231 NSFL1CQ9UNZ2 370 aaKnown RBP12.4□□□□□ -0.42
SMARCE1-210ENST00000481231 RBBP6Q7Z6E9 1792 aaKnown RBP12.4□□□□□ -0.42
SMARCE1-210ENST00000481231 RANBP2P49792 3224 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-210ENST00000481231 ERBB4Q15303 1308 aa12.39□□□□□ -0.43
SMARCE1-210ENST00000481231 COL4A1P02462 1669 aa12.39□□□□□ -0.43
SMARCE1-210ENST00000481231 SREBF2Q12772 1141 aa12.39□□□□□ -0.43
SMARCE1-210ENST00000481231 CHRDL2Q6WN34 429 aa12.39□□□□□ -0.43
SMARCE1-210ENST00000481231 LRP10Q7Z4F1 713 aa12.39□□□□□ -0.43
SMARCE1-210ENST00000481231 CFHR5Q9BXR6 569 aa12.39□□□□□ -0.43
SMARCE1-210ENST00000481231 TSPYL4Q9UJ04 414 aa12.39□□□□□ -0.43
SMARCE1-210ENST00000481231 COL6A3P12111 3177 aa12.38□□□□□ -0.43
SMARCE1-210ENST00000481231 TAF1P21675 1872 aa12.38□□□□□ -0.43
SMARCE1-210ENST00000481231 VIL1P09327 827 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-210ENST00000481231 ZNF280AP59817 542 aaPredicted RBP12.38□□□□□ -0.43
SMARCE1-210ENST00000481231 GPSM2P81274 684 aa12.38□□□□□ -0.43
SMARCE1-210ENST00000481231 PDIA6Q15084 440 aa12.38□□□□□ -0.43
SMARCE1-210ENST00000481231 PROSER3Q2NL68 480 aa12.38□□□□□ -0.43
SMARCE1-210ENST00000481231 PNNQ9H307 717 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-210ENST00000481231 PTPN22Q9Y2R2 807 aa12.38□□□□□ -0.43
SMARCE1-210ENST00000481231 ANXA1P04083 346 aa12.37□□□□□ -0.43
SMARCE1-210ENST00000481231 PRKG1Q13976 671 aa12.37□□□□□ -0.43
SMARCE1-210ENST00000481231 CD99L2Q8TCZ2 262 aa12.37□□□□□ -0.43
SMARCE1-210ENST00000481231 CELF1Q92879 486 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-210ENST00000481231 ARMC5Q96C12 935 aa12.37□□□□□ -0.43
SMARCE1-210ENST00000481231 ANKRD36CQ5JPF3 1778 aa12.37□□□□□ -0.43
SMARCE1-210ENST00000481231 SCN9AQ15858 1988 aa12.37□□□□□ -0.43
SMARCE1-210ENST00000481231 CUL9Q8IWT3 2517 aa12.37□□□□□ -0.43
SMARCE1-210ENST00000481231 KIAA0100Q14667 2235 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-210ENST00000481231 DLG5Q8TDM6 1919 aa12.37□□□□□ -0.43
SMARCE1-210ENST00000481231 DDX60Q8IY21 1712 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-210ENST00000481231 ZNF609O15014 1411 aa12.37□□□□□ -0.43
SMARCE1-210ENST00000481231 EIF2S2P20042 333 aaKnown RBP12.36□□□□□ -0.43
SMARCE1-210ENST00000481231 CAP1Q01518 475 aa12.36□□□□□ -0.43
SMARCE1-210ENST00000481231 PTPN12Q05209 780 aaKnown RBP12.36□□□□□ -0.43
SMARCE1-210ENST00000481231 TMC4Q7Z404 712 aa12.36□□□□□ -0.43
SMARCE1-210ENST00000481231 NLRP10Q86W26 655 aa12.36□□□□□ -0.43
SMARCE1-210ENST00000481231 MYOZ2Q9NPC6 264 aa12.36□□□□□ -0.43
SMARCE1-210ENST00000481231 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.36□□□□□ -0.43
SMARCE1-210ENST00000481231 RBM27Q9P2N5 1060 aaKnown RBP12.36□□□□□ -0.43
SMARCE1-210ENST00000481231 PITPNM2Q9BZ72 1349 aa12.36□□□□□ -0.43
SMARCE1-210ENST00000481231 CEP290O15078 2479 aa12.35□□□□□ -0.43
SMARCE1-210ENST00000481231 RIPK4P57078 832 aa12.35□□□□□ -0.43
SMARCE1-210ENST00000481231 RSBN1LQ6PCB5 846 aaPredicted RBP12.35□□□□□ -0.43
SMARCE1-210ENST00000481231 TBC1D16Q8TBP0 767 aa12.35□□□□□ -0.43
SMARCE1-210ENST00000481231 EYA3Q99504 573 aa12.35□□□□□ -0.43
SMARCE1-210ENST00000481231 TRMT112Q9UI30 125 aaKnown RBP12.35□□□□□ -0.43
SMARCE1-210ENST00000481231 FZD1Q9UP38 647 aa12.35□□□□□ -0.43
SMARCE1-210ENST00000481231 MYCP01106 439 aaPredicted RBP12.34□□□□□ -0.43
SMARCE1-210ENST00000481231 TCIRG1Q13488 830 aa12.34□□□□□ -0.43
SMARCE1-210ENST00000481231 NBPF9Q3BBW0 867 aa12.34□□□□□ -0.43
SMARCE1-210ENST00000481231 SPRYD7Q5W111 196 aa12.34□□□□□ -0.43
SMARCE1-210ENST00000481231 IFNL1Q8IU54 200 aa12.34□□□□□ -0.43
SMARCE1-210ENST00000481231 ZNF333Q96JL9 665 aa12.34□□□□□ -0.43
SMARCE1-210ENST00000481231 TMEM106CQ9BVX2 250 aa12.34□□□□□ -0.43
SMARCE1-210ENST00000481231 BABAM1Q9NWV8 329 aa12.34□□□□□ -0.43
SMARCE1-210ENST00000481231 SH3TC1Q8TE82 1336 aa12.34□□□□□ -0.43
SMARCE1-210ENST00000481231 IGF2BP3O00425 579 aaKnown RBP eCLIP12.33□□□□□ -0.44
SMARCE1-210ENST00000481231 ALDH1A1P00352 501 aa12.33□□□□□ -0.44
SMARCE1-210ENST00000481231 USP17L8P0C7I0 530 aa12.33□□□□□ -0.44
SMARCE1-210ENST00000481231 TMPOP42166 694 aaKnown RBP12.33□□□□□ -0.44
SMARCE1-210ENST00000481231 AGBL3Q8NEM8 1001 aa12.33□□□□□ -0.44
SMARCE1-210ENST00000481231 XAGE3Q8WTP9 111 aa12.33□□□□□ -0.44
SMARCE1-210ENST00000481231 NECTIN2Q92692 538 aa12.33□□□□□ -0.44
SMARCE1-210ENST00000481231 ERO1AQ96HE7 468 aa12.33□□□□□ -0.44
SMARCE1-210ENST00000481231 G3V3G9 751 aa12.32□□□□□ -0.44
SMARCE1-210ENST00000481231 UFL1O94874 794 aa12.32□□□□□ -0.44
SMARCE1-210ENST00000481231 NF2P35240 595 aa12.32□□□□□ -0.44
SMARCE1-210ENST00000481231 LMOD3Q0VAK6 560 aa12.32□□□□□ -0.44
SMARCE1-210ENST00000481231 AIMP1Q12904 312 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-210ENST00000481231 RALBP1Q15311 655 aa12.32□□□□□ -0.44
SMARCE1-210ENST00000481231 DCAF8Q5TAQ9 597 aa12.32□□□□□ -0.44
SMARCE1-210ENST00000481231 COPS6Q7L5N1 327 aa12.32□□□□□ -0.44
SMARCE1-210ENST00000481231 GMLQ99445 158 aa12.32□□□□□ -0.44
SMARCE1-210ENST00000481231 ZC3H12CQ9C0D7 883 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-210ENST00000481231 EFCC1Q9HA90 598 aa12.32□□□□□ -0.44
SMARCE1-210ENST00000481231 CRHR2Q13324 411 aa12.31□□□□□ -0.44
SMARCE1-210ENST00000481231 KRT24Q2M2I5 525 aa12.31□□□□□ -0.44
SMARCE1-210ENST00000481231 SLC4A8Q2Y0W8 1093 aa12.31□□□□□ -0.44
SMARCE1-210ENST00000481231 HSP90AB3PQ58FF7 597 aa12.31□□□□□ -0.44
SMARCE1-210ENST00000481231 ARMC9Q7Z3E5 817 aa12.31□□□□□ -0.44
SMARCE1-210ENST00000481231 MANSC4A6NHS7 340 aaPredicted RBP12.3□□□□□ -0.44
SMARCE1-210ENST00000481231 CHL1O00533 1208 aa12.3□□□□□ -0.44
SMARCE1-210ENST00000481231 LDLRAD1Q5T700 205 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms