RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 PMFBP1Q8TBY8 1022 aa9.38□□□□□ -0.91
LRCH3-216ENST00000481048 RALGAPBQ86X10 1494 aa9.38□□□□□ -0.91
LRCH3-216ENST00000481048 GLI3P10071 1580 aa9.37□□□□□ -0.91
LRCH3-216ENST00000481048 EP400Q96L91 3159 aa9.37□□□□□ -0.91
LRCH3-216ENST00000481048 ABCA3Q99758 1704 aa9.37□□□□□ -0.91
LRCH3-216ENST00000481048 FAM83GA6ND36 823 aa9.37□□□□□ -0.91
LRCH3-216ENST00000481048 APBB1O00213 710 aa9.37□□□□□ -0.91
LRCH3-216ENST00000481048 MYCP01106 439 aaPredicted RBP9.37□□□□□ -0.91
LRCH3-216ENST00000481048 IL2RAP01589 272 aa9.37□□□□□ -0.91
LRCH3-216ENST00000481048 CDCA7Q9BWT1 371 aaPredicted RBP9.37□□□□□ -0.91
LRCH3-216ENST00000481048 GPAMQ9HCL2 828 aa9.37□□□□□ -0.91
LRCH3-216ENST00000481048 CEP126Q9P2H0 1117 aa9.37□□□□□ -0.91
LRCH3-216ENST00000481048 ITSN1Q15811 1721 aa9.36□□□□□ -0.91
LRCH3-216ENST00000481048 TRPM3Q9HCF6 1732 aaPredicted RBP9.36□□□□□ -0.91
LRCH3-216ENST00000481048 TULP4Q9NRJ4 1543 aa9.36□□□□□ -0.91
LRCH3-216ENST00000481048 PLCH1Q4KWH8 1693 aa9.36□□□□□ -0.91
LRCH3-216ENST00000481048 ALS2Q96Q42 1657 aa9.36□□□□□ -0.91
LRCH3-216ENST00000481048 PHKA2P46019 1235 aa9.36□□□□□ -0.91
LRCH3-216ENST00000481048 CCDC85AQ96PX6 553 aaPredicted RBP9.36□□□□□ -0.91
LRCH3-216ENST00000481048 BLMP54132 1417 aaPredicted RBP9.36□□□□□ -0.91
LRCH3-216ENST00000481048 KIAA1210Q9ULL0 1709 aa9.36□□□□□ -0.91
LRCH3-216ENST00000481048 SF3B2Q13435 895 aaKnown RBP9.35□□□□□ -0.91
LRCH3-216ENST00000481048 ARHGEF28Q8N1W1 1705 aaKnown RBP9.35□□□□□ -0.91
LRCH3-216ENST00000481048 NGDNQ8NEJ9 315 aaKnown RBP9.35□□□□□ -0.91
LRCH3-216ENST00000481048 DCAF5Q96JK2 942 aa9.35□□□□□ -0.91
LRCH3-216ENST00000481048 ZSCAN10Q96SZ4 725 aaPredicted RBP9.35□□□□□ -0.91
LRCH3-216ENST00000481048 HIRIP3Q9BW71 556 aaPredicted RBP9.35□□□□□ -0.91
LRCH3-216ENST00000481048 COL14A1Q05707 1796 aaKnown RBP9.35□□□□□ -0.91
LRCH3-216ENST00000481048 KRT27Q7Z3Y8 459 aa9.34□□□□□ -0.91
LRCH3-216ENST00000481048 LRRC4BQ9NT99 713 aa9.34□□□□□ -0.91
LRCH3-216ENST00000481048 CCDC9Q9Y3X0 531 aaKnown RBP9.34□□□□□ -0.91
LRCH3-216ENST00000481048 PRR36Q9H6K5 1346 aa9.33□□□□□ -0.92
LRCH3-216ENST00000481048 OIP5O43482 229 aa9.33□□□□□ -0.92
LRCH3-216ENST00000481048 THBS1P07996 1170 aa9.33□□□□□ -0.92
LRCH3-216ENST00000481048 GTF2E1P29083 439 aaPredicted RBP9.33□□□□□ -0.92
LRCH3-216ENST00000481048 MAP2K3P46734 347 aa9.33□□□□□ -0.92
LRCH3-216ENST00000481048 TMEM214Q6NUQ4 689 aaKnown RBP9.33□□□□□ -0.92
LRCH3-216ENST00000481048 NUDT16Q96DE0 195 aaKnown RBP9.33□□□□□ -0.92
LRCH3-216ENST00000481048 XAGE2Q96GT9 111 aa9.33□□□□□ -0.92
LRCH3-216ENST00000481048 CFHR5Q9BXR6 569 aa9.33□□□□□ -0.92
LRCH3-216ENST00000481048 OXCT2Q9BYC2 517 aaPredicted RBP9.33□□□□□ -0.92
LRCH3-216ENST00000481048 HRH3Q9Y5N1 445 aa9.33□□□□□ -0.92
LRCH3-216ENST00000481048 NRAPQ86VF7 1730 aa9.32□□□□□ -0.92
LRCH3-216ENST00000481048 A0A1B0GTH6 734 aa9.32□□□□□ -0.92
LRCH3-216ENST00000481048 PLA2G4EQ3MJ16 856 aa9.32□□□□□ -0.92
LRCH3-216ENST00000481048 GNASQ5JWF2 1037 aa9.32□□□□□ -0.92
LRCH3-216ENST00000481048 BTG4Q9NY30 223 aa9.32□□□□□ -0.92
LRCH3-216ENST00000481048 CRYBG1Q9Y4K1 1723 aa9.31□□□□□ -0.92
LRCH3-216ENST00000481048 MSTNO14793 375 aa9.31□□□□□ -0.92
LRCH3-216ENST00000481048 TSGA10IPQ3SY00 556 aa9.31□□□□□ -0.92
LRCH3-216ENST00000481048 CDK19Q9BWU1 502 aa9.31□□□□□ -0.92
LRCH3-216ENST00000481048 FHDC1Q9C0D6 1143 aaPredicted RBP9.31□□□□□ -0.92
LRCH3-216ENST00000481048 PHF24Q9UPV7 400 aa9.31□□□□□ -0.92
LRCH3-216ENST00000481048 POLR3AO14802 1390 aaPredicted RBP9.31□□□□□ -0.92
LRCH3-216ENST00000481048 SPATA31A5Q5VU36 1347 aa9.31□□□□□ -0.92
LRCH3-216ENST00000481048 SPATA31A7Q8IWB4 1347 aa9.31□□□□□ -0.92
LRCH3-216ENST00000481048 ATP7BP35670 1465 aa9.3□□□□□ -0.92
LRCH3-216ENST00000481048 CSB-PGBD3P0DP91 1061 aa9.3□□□□□ -0.92
LRCH3-216ENST00000481048 NBPF8Q3BBV2 869 aa9.3□□□□□ -0.92
LRCH3-216ENST00000481048 C4orf17Q53FE4 359 aa9.3□□□□□ -0.92
LRCH3-216ENST00000481048 PGBD3Q8N328 593 aa9.3□□□□□ -0.92
LRCH3-216ENST00000481048 RUBCNLQ9H714 662 aa9.3□□□□□ -0.92
LRCH3-216ENST00000481048 TBC1D2BQ9UPU7 963 aa9.3□□□□□ -0.92
LRCH3-216ENST00000481048 BRD4O60885 1362 aaPredicted RBP9.29□□□□□ -0.92
LRCH3-216ENST00000481048 SRCAPQ6ZRS2 3230 aa9.29□□□□□ -0.92
LRCH3-216ENST00000481048 BAG6P46379 1132 aa9.29□□□□□ -0.92
LRCH3-216ENST00000481048 EIF4G2P78344 907 aaKnown RBP eCLIP9.29□□□□□ -0.92
LRCH3-216ENST00000481048 USP4Q13107 963 aa9.29□□□□□ -0.92
LRCH3-216ENST00000481048 KLRG1Q96E93 195 aa9.29□□□□□ -0.92
LRCH3-216ENST00000481048 PRDM11Q9NQV5 511 aa9.29□□□□□ -0.92
LRCH3-216ENST00000481048 DOLKQ9UPQ8 538 aa9.29□□□□□ -0.92
LRCH3-216ENST00000481048 TOPAZ1Q8N9V7 1692 aa9.29□□□□□ -0.92
LRCH3-216ENST00000481048 SLC24A1O60721 1099 aa9.28□□□□□ -0.92
LRCH3-216ENST00000481048 STAU1O95793 577 aaKnown RBP9.28□□□□□ -0.92
LRCH3-216ENST00000481048 MSX1P28360 303 aa9.28□□□□□ -0.92
LRCH3-216ENST00000481048 DEFB132Q7Z7B7 95 aa9.28□□□□□ -0.92
LRCH3-216ENST00000481048 GALNT6Q8NCL4 622 aa9.28□□□□□ -0.92
LRCH3-216ENST00000481048 SPOCK3Q9BQ16 436 aa9.28□□□□□ -0.92
LRCH3-216ENST00000481048 ACEP12821 1306 aa9.28□□□□□ -0.92
LRCH3-216ENST00000481048 RGPD1P0DJD0 1748 aa9.28□□□□□ -0.92
LRCH3-216ENST00000481048 SHISA8B8ZZ34 492 aa9.27□□□□□ -0.93
LRCH3-216ENST00000481048 ITGB2P05107 769 aa9.27□□□□□ -0.93
LRCH3-216ENST00000481048 SNRPNP63162 240 aaKnown RBP9.27□□□□□ -0.93
LRCH3-216ENST00000481048 UBAP2LQ14157 1087 aaKnown RBP9.27□□□□□ -0.93
LRCH3-216ENST00000481048 LBRQ14739 615 aaKnown RBP9.27□□□□□ -0.93
LRCH3-216ENST00000481048 SLFNL1Q499Z3 407 aa9.27□□□□□ -0.93
LRCH3-216ENST00000481048 NLRP13Q86W25 1043 aa9.27□□□□□ -0.93
LRCH3-216ENST00000481048 PHTF2Q8N3S3 785 aa9.27□□□□□ -0.93
LRCH3-216ENST00000481048 ABTB2Q8N961 1025 aa9.27□□□□□ -0.93
LRCH3-216ENST00000481048 PRM3Q9NNZ6 103 aa9.27□□□□□ -0.93
LRCH3-216ENST00000481048 SPATA31A1Q5TZJ5 1347 aa9.27□□□□□ -0.93
LRCH3-216ENST00000481048 KIAA0232Q92628 1395 aa9.26□□□□□ -0.93
LRCH3-216ENST00000481048 EVA1CP58658 441 aa9.26□□□□□ -0.93
LRCH3-216ENST00000481048 NBPF1Q3BBV0 1214 aa9.26□□□□□ -0.93
LRCH3-216ENST00000481048 EFHC2Q5JST6 749 aa9.26□□□□□ -0.93
LRCH3-216ENST00000481048 C1orf229Q6ZS94 237 aaPredicted RBP9.26□□□□□ -0.93
LRCH3-216ENST00000481048 RNF135Q8IUD6 432 aa9.26□□□□□ -0.93
LRCH3-216ENST00000481048 RHBDD1Q8TEB9 315 aa9.26□□□□□ -0.93
LRCH3-216ENST00000481048 ETNK1Q9HBU6 452 aa9.26□□□□□ -0.93
LRCH3-216ENST00000481048 PHRF1Q9P1Y6 1649 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms