RNA–Protein interactions for RNA: ENST00000480342.5

RERE-213, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 2

Gene RERE, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-213ENST00000480342 CTIFO43310 598 aaKnown RBP11.72□□□□□ -0.53
RERE-213ENST00000480342 ZNF75DP51815 510 aa11.72□□□□□ -0.53
RERE-213ENST00000480342 BLOC1S2Q6QNY1 142 aa11.72□□□□□ -0.53
RERE-213ENST00000480342 CACTINQ8WUQ7 758 aaKnown RBP11.72□□□□□ -0.53
RERE-213ENST00000480342 GTPBP4Q9BZE4 634 aaKnown RBP11.72□□□□□ -0.53
RERE-213ENST00000480342 JAK2O60674 1132 aa11.72□□□□□ -0.53
RERE-213ENST00000480342 CCDC144BQ3MJ40 725 aa11.72□□□□□ -0.53
RERE-213ENST00000480342 CCDC144CPQ8IYA2 1237 aa11.72□□□□□ -0.53
RERE-213ENST00000480342 LEO1Q8WVC0 666 aaPredicted RBP11.72□□□□□ -0.53
RERE-213ENST00000480342 GPATCH3Q96I76 525 aa11.72□□□□□ -0.53
RERE-213ENST00000480342 FSD1Q9BTV5 496 aa11.72□□□□□ -0.53
RERE-213ENST00000480342 TLR7Q9NYK1 1049 aaKnown RBP11.72□□□□□ -0.53
RERE-213ENST00000480342 TTC41PQ6P2S7 1318 aa11.72□□□□□ -0.53
RERE-213ENST00000480342 A0A0D9SFI3 127 aa11.71□□□□□ -0.53
RERE-213ENST00000480342 NPHP1O15259 732 aa11.71□□□□□ -0.53
RERE-213ENST00000480342 ZNF771Q7L3S4 317 aaPredicted RBP11.71□□□□□ -0.53
RERE-213ENST00000480342 CCDC112Q8NEF3 446 aa11.71□□□□□ -0.53
RERE-213ENST00000480342 KLHDC4Q8TBB5 520 aa11.71□□□□□ -0.53
RERE-213ENST00000480342 EVI5LQ96CN4 794 aa11.71□□□□□ -0.53
RERE-213ENST00000480342 EDC3Q96F86 508 aaKnown RBP11.71□□□□□ -0.53
RERE-213ENST00000480342 DBF4Q9UBU7 674 aaPredicted RBP11.71□□□□□ -0.53
RERE-213ENST00000480342 AIMP1Q12904 312 aaKnown RBP11.71□□□□□ -0.54
RERE-213ENST00000480342 TM6SF1Q9BZW5 370 aa11.71□□□□□ -0.54
RERE-213ENST00000480342 SCAND2PQ9GZW5 306 aaPredicted RBP11.71□□□□□ -0.54
RERE-213ENST00000480342 TRMT1Q9NXH9 659 aaKnown RBP11.71□□□□□ -0.54
RERE-213ENST00000480342 MAP3K2Q9Y2U5 619 aa11.71□□□□□ -0.54
RERE-213ENST00000480342 NDUFB9Q9Y6M9 179 aa11.71□□□□□ -0.54
RERE-213ENST00000480342 PDCP20941 246 aa11.7□□□□□ -0.54
RERE-213ENST00000480342 TOM1L2Q6ZVM7 507 aa11.7□□□□□ -0.54
RERE-213ENST00000480342 ZCRB1Q8TBF4 217 aaKnown RBP11.7□□□□□ -0.54
RERE-213ENST00000480342 CABLES1Q8TDN4 633 aa11.7□□□□□ -0.54
RERE-213ENST00000480342 ERCC4Q92889 916 aaPredicted RBP11.7□□□□□ -0.54
RERE-213ENST00000480342 PGBD1Q96JS3 809 aa11.7□□□□□ -0.54
RERE-213ENST00000480342 LRRC2Q9BYS8 371 aa11.7□□□□□ -0.54
RERE-213ENST00000480342 PODXL2Q9NZ53 605 aa11.7□□□□□ -0.54
RERE-213ENST00000480342 CCDC9Q9Y3X0 531 aaKnown RBP11.7□□□□□ -0.54
RERE-213ENST00000480342 ITGB4P16144 1822 aa11.7□□□□□ -0.54
RERE-213ENST00000480342 USP27XA6NNY8 438 aa11.7□□□□□ -0.54
RERE-213ENST00000480342 HSP90B1P14625 803 aaKnown RBP11.7□□□□□ -0.54
RERE-213ENST00000480342 PSMA5P28066 241 aa11.7□□□□□ -0.54
RERE-213ENST00000480342 PROSER3Q2NL68 480 aa11.7□□□□□ -0.54
RERE-213ENST00000480342 MPRIPQ6WCQ1 1025 aa11.7□□□□□ -0.54
RERE-213ENST00000480342 FILIP1Q7Z7B0 1213 aa11.7□□□□□ -0.54
RERE-213ENST00000480342 EAF2Q96CJ1 260 aaPredicted RBP11.7□□□□□ -0.54
RERE-213ENST00000480342 SLIT2O94813 1529 aa11.69□□□□□ -0.54
RERE-213ENST00000480342 KCPQ6ZWJ8 1503 aa11.69□□□□□ -0.54
RERE-213ENST00000480342 H3BQV1 296 aa11.69□□□□□ -0.54
RERE-213ENST00000480342 CHGBP05060 677 aa11.69□□□□□ -0.54
RERE-213ENST00000480342 IFFO2Q5TF58 517 aa11.69□□□□□ -0.54
RERE-213ENST00000480342 ZNF589Q86UQ0 364 aaPredicted RBP11.69□□□□□ -0.54
RERE-213ENST00000480342 PLA2G4DQ86XP0 818 aa11.69□□□□□ -0.54
RERE-213ENST00000480342 MAP4K1Q92918 833 aa11.69□□□□□ -0.54
RERE-213ENST00000480342 FTOQ9C0B1 505 aaKnown RBP eCLIP11.69□□□□□ -0.545e-7■■■□□ 15.5
RERE-213ENST00000480342 CLSTN2Q9H4D0 955 aa11.69□□□□□ -0.54
RERE-213ENST00000480342 PRAMEF22A3QJZ6 481 aa11.69□□□□□ -0.54
RERE-213ENST00000480342 SMTNL1A8MU46 457 aa11.69□□□□□ -0.54
RERE-213ENST00000480342 GOLGA6L19H0YKK7 550 aa11.69□□□□□ -0.54
RERE-213ENST00000480342 GIGYF1O75420 1035 aaPredicted RBP11.69□□□□□ -0.54
RERE-213ENST00000480342 TOB2Q14106 344 aaPredicted RBP11.69□□□□□ -0.54
RERE-213ENST00000480342 CHRNA2Q15822 529 aa11.69□□□□□ -0.54
RERE-213ENST00000480342 CEP135Q66GS9 1140 aa11.68□□□□□ -0.54
RERE-213ENST00000480342 DDX19AQ9NUU7 478 aaKnown RBP11.68□□□□□ -0.54
RERE-213ENST00000480342 USP16Q9Y5T5 823 aa11.68□□□□□ -0.54
RERE-213ENST00000480342 COL15A1P39059 1388 aa11.68□□□□□ -0.54
RERE-213ENST00000480342 ELP1O95163 1332 aa11.68□□□□□ -0.54
RERE-213ENST00000480342 NUP188Q5SRE5 1749 aa11.68□□□□□ -0.54
RERE-213ENST00000480342 RPS6KB1P23443 525 aa11.68□□□□□ -0.54
RERE-213ENST00000480342 FGD1P98174 961 aa11.68□□□□□ -0.54
RERE-213ENST00000480342 G3BP1Q13283 466 aaKnown RBP eCLIP11.68□□□□□ -0.54
RERE-213ENST00000480342 RNF20Q5VTR2 975 aa11.68□□□□□ -0.54
RERE-213ENST00000480342 ZNF790Q6PG37 636 aa11.68□□□□□ -0.54
RERE-213ENST00000480342 BRF1Q92994 677 aa11.68□□□□□ -0.54
RERE-213ENST00000480342 SYTL4Q96C24 671 aaPredicted RBP11.68□□□□□ -0.54
RERE-213ENST00000480342 NAP1L2Q9ULW6 460 aaPredicted RBP11.68□□□□□ -0.54
RERE-213ENST00000480342 ARFGEF2Q9Y6D5 1785 aa11.68□□□□□ -0.54
RERE-213ENST00000480342 ALDH1L1O75891 902 aa11.67□□□□□ -0.54
RERE-213ENST00000480342 SASH1O94885 1247 aa11.67□□□□□ -0.54
RERE-213ENST00000480342 DDX58O95786 925 aaKnown RBP11.67□□□□□ -0.54
RERE-213ENST00000480342 EVA1CP58658 441 aa11.67□□□□□ -0.54
RERE-213ENST00000480342 C11orf57Q6ZUT1 292 aaPredicted RBP11.67□□□□□ -0.54
RERE-213ENST00000480342 CTNNA3Q9UI47 895 aa11.67□□□□□ -0.54
RERE-213ENST00000480342 ADCY9O60503 1353 aa11.67□□□□□ -0.54
RERE-213ENST00000480342 CYP27B1O15528 508 aa11.67□□□□□ -0.54
RERE-213ENST00000480342 FMNL2Q96PY5 1086 aa11.67□□□□□ -0.54
RERE-213ENST00000480342 DDX21Q9NR30 783 aaKnown RBP eCLIP11.67□□□□□ -0.54
RERE-213ENST00000480342 OGFRQ9NZT2 677 aa11.67□□□□□ -0.54
RERE-213ENST00000480342 JCADQ9P266 1359 aa11.67□□□□□ -0.54
RERE-213ENST00000480342 USP42Q9H9J4 1324 aaKnown RBP11.67□□□□□ -0.54
RERE-213ENST00000480342 BECN2A8MW95 431 aa11.66□□□□□ -0.54
RERE-213ENST00000480342 KIF20AO95235 890 aa11.66□□□□□ -0.54
RERE-213ENST00000480342 CCDC129Q6ZRS4 1044 aa11.66□□□□□ -0.54
RERE-213ENST00000480342 TDRD7Q8NHU6 1098 aaKnown RBP11.66□□□□□ -0.54
RERE-213ENST00000480342 BICC1Q9H694 974 aaKnown RBP11.66□□□□□ -0.54
RERE-213ENST00000480342 RREB1Q92766 1687 aa11.66□□□□□ -0.54
RERE-213ENST00000480342 SKILP12757 684 aa11.66□□□□□ -0.54
RERE-213ENST00000480342 ANKRD1Q15327 319 aa11.66□□□□□ -0.54
RERE-213ENST00000480342 LRRC8AQ8IWT6 810 aa11.66□□□□□ -0.54
RERE-213ENST00000480342 KCNB2Q92953 911 aa11.66□□□□□ -0.54
RERE-213ENST00000480342 SUCLG2Q96I99 432 aa11.66□□□□□ -0.54
RERE-213ENST00000480342 FEZ1Q99689 392 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms