RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 CSRNP1Q96S65 589 aa8.87□□□□□ -0.99
PBRM1-220ENST00000480064 QTRT2Q9H974 415 aaKnown RBP8.87□□□□□ -0.99
PBRM1-220ENST00000480064 PCDHGB7Q9Y5F8 929 aa8.87□□□□□ -0.99
PBRM1-220ENST00000480064 AK5Q9Y6K8 562 aa8.87□□□□□ -0.99
PBRM1-220ENST00000480064 A0A1W2PNR3 127 aa8.86□□□□□ -0.99
PBRM1-220ENST00000480064 ITGB2P05107 769 aa8.86□□□□□ -0.99
PBRM1-220ENST00000480064 SLCO4C1Q6ZQN7 724 aa8.86□□□□□ -0.99
PBRM1-220ENST00000480064 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.86□□□□□ -0.99
PBRM1-220ENST00000480064 CABP1Q9NZU7 370 aa8.86□□□□□ -0.99
PBRM1-220ENST00000480064 SCHIP1Q9P0W5 487 aaPredicted RBP8.86□□□□□ -0.99
PBRM1-220ENST00000480064 DDX41Q9UJV9 622 aaKnown RBP8.86□□□□□ -0.99
PBRM1-220ENST00000480064 USP3Q9Y6I4 520 aa8.86□□□□□ -0.99
PBRM1-220ENST00000480064 ARAFP10398 606 aa8.85□□□□□ -0.99
PBRM1-220ENST00000480064 TATP17735 454 aaPredicted RBP8.85□□□□□ -0.99
PBRM1-220ENST00000480064 IBSPP21815 317 aaPredicted RBP8.85□□□□□ -0.99
PBRM1-220ENST00000480064 AMPD1P23109 780 aa8.85□□□□□ -0.99
PBRM1-220ENST00000480064 SPOCK3Q9BQ16 436 aa8.85□□□□□ -0.99
PBRM1-220ENST00000480064 ZDHHC3Q9NYG2 299 aa8.85□□□□□ -0.99
PBRM1-220ENST00000480064 PDGFAP04085 211 aa8.84□□□□□ -0.99
PBRM1-220ENST00000480064 BMS1Q14692 1282 aaKnown RBP8.84□□□□□ -0.99
PBRM1-220ENST00000480064 NFE2L2Q16236 605 aa8.84□□□□□ -0.99
PBRM1-220ENST00000480064 ZIC5Q96T25 663 aa8.84□□□□□ -0.99
PBRM1-220ENST00000480064 PIF1Q9H611 641 aa8.84□□□□□ -0.99
PBRM1-220ENST00000480064 GGT7Q9UJ14 662 aa8.84□□□□□ -0.99
PBRM1-220ENST00000480064 TBX22Q9Y458 520 aa8.84□□□□□ -0.99
PBRM1-220ENST00000480064 hCG_2014768A0A024R1R8 64 aa8.83□□□□□ -1
PBRM1-220ENST00000480064 DCDC2BA2VCK2 349 aa8.83□□□□□ -1
PBRM1-220ENST00000480064 MAPTP10636 758 aaKnown RBP8.83□□□□□ -1
PBRM1-220ENST00000480064 EPXP11678 715 aa8.83□□□□□ -1
PBRM1-220ENST00000480064 ZAP70P43403 619 aa8.83□□□□□ -1
PBRM1-220ENST00000480064 TNP2Q05952 138 aa8.83□□□□□ -1
PBRM1-220ENST00000480064 RBL2Q08999 1139 aa8.83□□□□□ -1
PBRM1-220ENST00000480064 NOL8Q76FK4 1167 aaKnown RBP8.83□□□□□ -1
PBRM1-220ENST00000480064 MRFAP1L1Q96HT8 127 aa8.83□□□□□ -1
PBRM1-220ENST00000480064 BTBD6Q96KE9 485 aa8.83□□□□□ -1
PBRM1-220ENST00000480064 LRFN2Q9ULH4 789 aa8.83□□□□□ -1
PBRM1-220ENST00000480064 GJA3Q9Y6H8 435 aa8.83□□□□□ -1
PBRM1-220ENST00000480064 NEURL1BA8MQ27 555 aa8.82□□□□□ -1
PBRM1-220ENST00000480064 EIF1AYO14602 144 aaKnown RBP8.82□□□□□ -1
PBRM1-220ENST00000480064 KHNYNO15037 678 aaKnown RBP8.82□□□□□ -1
PBRM1-220ENST00000480064 HOXB4P17483 251 aaPredicted RBP8.82□□□□□ -1
PBRM1-220ENST00000480064 FAM182BQ5T319 152 aa8.82□□□□□ -1
PBRM1-220ENST00000480064 LINC00114Q6XXX2 140 aa8.82□□□□□ -1
PBRM1-220ENST00000480064 ALYREFQ86V81 257 aaKnown RBP8.82□□□□□ -1
PBRM1-220ENST00000480064 CKAP2LQ8IYA6 745 aa8.82□□□□□ -1
PBRM1-220ENST00000480064 DNAJC25Q9H1X3 360 aa8.82□□□□□ -1
PBRM1-220ENST00000480064 FAM13BQ9NYF5 915 aa8.82□□□□□ -1
PBRM1-220ENST00000480064 HCN2Q9UL51 889 aa8.82□□□□□ -1
PBRM1-220ENST00000480064 ZNF232Q9UNY5 417 aa8.82□□□□□ -1
PBRM1-220ENST00000480064 PARP3Q9Y6F1 533 aa8.82□□□□□ -1
PBRM1-220ENST00000480064 SBNO2Q9Y2G9 1366 aa8.82□□□□□ -1
PBRM1-220ENST00000480064 ARID4BQ4LE39 1312 aaPredicted RBP8.81□□□□□ -1
PBRM1-220ENST00000480064 KRBA1A5PL33 1030 aa8.81□□□□□ -1
PBRM1-220ENST00000480064 ZBTB39O15060 712 aa8.81□□□□□ -1
PBRM1-220ENST00000480064 RPLP1P05386 114 aaKnown RBP8.81□□□□□ -1
PBRM1-220ENST00000480064 CTSHP09668 335 aa8.81□□□□□ -1
PBRM1-220ENST00000480064 CD33P20138 364 aa8.81□□□□□ -1
PBRM1-220ENST00000480064 COL8A1P27658 744 aa8.81□□□□□ -1
PBRM1-220ENST00000480064 IGBP1P78318 339 aa8.81□□□□□ -1
PBRM1-220ENST00000480064 ORC1Q13415 861 aa8.81□□□□□ -1
PBRM1-220ENST00000480064 DGKZQ13574 1117 aa8.81□□□□□ -1
PBRM1-220ENST00000480064 C8orf34Q49A92 452 aa8.81□□□□□ -1
PBRM1-220ENST00000480064 EGFLAMQ63HQ2 1017 aa8.81□□□□□ -1
PBRM1-220ENST00000480064 BICDL1Q6ZP65 573 aa8.81□□□□□ -1
PBRM1-220ENST00000480064 MCF2L2Q86YR7 1114 aa8.81□□□□□ -1
PBRM1-220ENST00000480064 SERTM1A2A2V5 107 aa8.8□□□□□ -1
PBRM1-220ENST00000480064 CPNE3O75131 537 aaKnown RBP8.8□□□□□ -1
PBRM1-220ENST00000480064 PROCP04070 461 aa8.8□□□□□ -1
PBRM1-220ENST00000480064 RACK1P63244 317 aaKnown RBP8.8□□□□□ -1
PBRM1-220ENST00000480064 PTPN12Q05209 780 aaKnown RBP8.8□□□□□ -1
PBRM1-220ENST00000480064 RTN1Q16799 776 aa8.8□□□□□ -1
PBRM1-220ENST00000480064 C11orf91Q3C1V1 193 aa8.8□□□□□ -1
PBRM1-220ENST00000480064 RNF187Q5TA31 235 aaPredicted RBP8.8□□□□□ -1
PBRM1-220ENST00000480064 MICAL1Q8TDZ2 1067 aa8.8□□□□□ -1
PBRM1-220ENST00000480064 PIK3R2O00459 728 aa8.79□□□□□ -1
PBRM1-220ENST00000480064 MARCH6O60337 910 aa8.79□□□□□ -1
PBRM1-220ENST00000480064 FGRP09769 529 aa8.79□□□□□ -1
PBRM1-220ENST00000480064 FAM157BP0CG42 384 aa8.79□□□□□ -1
PBRM1-220ENST00000480064 ADH6P28332 368 aa8.79□□□□□ -1
PBRM1-220ENST00000480064 TXLNAP40222 546 aa8.79□□□□□ -1
PBRM1-220ENST00000480064 GRIN2CQ14957 1233 aa8.79□□□□□ -1
PBRM1-220ENST00000480064 ZCRB1Q8TBF4 217 aaKnown RBP8.79□□□□□ -1
PBRM1-220ENST00000480064 GPRASP2Q96D09 838 aa8.79□□□□□ -1
PBRM1-220ENST00000480064 SUV39H2Q9H5I1 410 aa8.79□□□□□ -1
PBRM1-220ENST00000480064 C12orf49Q9H741 205 aa8.79□□□□□ -1
PBRM1-220ENST00000480064 AVENQ9NQS1 362 aaPredicted RBP8.79□□□□□ -1
PBRM1-220ENST00000480064 GIPC1O14908 333 aa8.78□□□□□ -1
PBRM1-220ENST00000480064 ANAPC15P60006 121 aa8.78□□□□□ -1
PBRM1-220ENST00000480064 TEAD4Q15561 434 aa8.78□□□□□ -1
PBRM1-220ENST00000480064 PTPROQ16827 1216 aa8.78□□□□□ -1
PBRM1-220ENST00000480064 SAMD5Q5TGI4 173 aa8.78□□□□□ -1
PBRM1-220ENST00000480064 ZNF746Q6NUN9 644 aaPredicted RBP8.78□□□□□ -1
PBRM1-220ENST00000480064 ETFBKMTQ8IXQ9 262 aa8.78□□□□□ -1
PBRM1-220ENST00000480064 ZDHHC1Q8WTX9 485 aa8.78□□□□□ -1
PBRM1-220ENST00000480064 L3MBTL2Q969R5 705 aa8.78□□□□□ -1
PBRM1-220ENST00000480064 IFT43Q96FT9 208 aa8.78□□□□□ -1
PBRM1-220ENST00000480064 KLF15Q9UIH9 416 aa8.78□□□□□ -1
PBRM1-220ENST00000480064 GNB5O14775 395 aa8.77□□□□□ -1.01
PBRM1-220ENST00000480064 SSBP05455 408 aaKnown RBP eCLIP8.77□□□□□ -1.01
PBRM1-220ENST00000480064 NOS2P35228 1153 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms