RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 HIBADHP31937 336 aaKnown RBP7.07□□□□□ -1.28
CPS1-207ENST00000479988 METTL22Q9BUU2 404 aaPredicted RBP7.07□□□□□ -1.28
CPS1-207ENST00000479988 COL3A1P02461 1466 aaPredicted RBP7.06□□□□□ -1.28
CPS1-207ENST00000479988 PPP4R3CPQ6ZMV5 832 aa7.06□□□□□ -1.28
CPS1-207ENST00000479988 TBC1D2Q9BYX2 928 aa7.06□□□□□ -1.28
CPS1-207ENST00000479988 BRMS1Q9HCU9 246 aa7.06□□□□□ -1.28
CPS1-207ENST00000479988 IL1RAPL2Q9NP60 686 aa7.06□□□□□ -1.28
CPS1-207ENST00000479988 USP16Q9Y5T5 823 aa7.06□□□□□ -1.28
CPS1-207ENST00000479988 CPDO75976 1380 aa7.06□□□□□ -1.28
CPS1-207ENST00000479988 C21orf2O43822 256 aa7.06□□□□□ -1.28
CPS1-207ENST00000479988 SAFBQ15424 915 aaKnown RBP eCLIP7.06□□□□□ -1.28
CPS1-207ENST00000479988 STK11IPQ8N1F8 1099 aa7.06□□□□□ -1.28
CPS1-207ENST00000479988 NAPBQ9H115 298 aa7.06□□□□□ -1.28
CPS1-207ENST00000479988 ADGRB2O60241 1585 aa7.06□□□□□ -1.28
CPS1-207ENST00000479988 USP19O94966 1318 aa7.06□□□□□ -1.28
CPS1-207ENST00000479988 MINDY4BA8MYZ0 360 aa7.06□□□□□ -1.28
CPS1-207ENST00000479988 TTC22Q5TAA0 569 aa7.06□□□□□ -1.28
CPS1-207ENST00000479988 WWC2Q6AWC2 1192 aa7.06□□□□□ -1.28
CPS1-207ENST00000479988 CIAPIN1Q6FI81 312 aa7.06□□□□□ -1.28
CPS1-207ENST00000479988 NAA16Q6N069 864 aaPredicted RBP7.06□□□□□ -1.28
CPS1-207ENST00000479988 SYAP1Q96A49 352 aaPredicted RBP7.06□□□□□ -1.28
CPS1-207ENST00000479988 DCAF15Q66K64 600 aa7.06□□□□□ -1.28
CPS1-207ENST00000479988 HELBQ8NG08 1087 aaPredicted RBP7.06□□□□□ -1.28
CPS1-207ENST00000479988 WDR66Q8TBY9 1149 aa7.06□□□□□ -1.28
CPS1-207ENST00000479988 ARHGEF1Q92888 912 aaKnown RBP7.06□□□□□ -1.28
CPS1-207ENST00000479988 ATG3Q9NT62 314 aa7.06□□□□□ -1.28
CPS1-207ENST00000479988 R3HCC1Q9Y3T6 440 aaKnown RBP7.06□□□□□ -1.28
CPS1-207ENST00000479988 GIGYF1O75420 1035 aaPredicted RBP7.05□□□□□ -1.28
CPS1-207ENST00000479988 ITGA6P23229 1130 aa7.05□□□□□ -1.28
CPS1-207ENST00000479988 EIF4A1P60842 406 aaKnown RBP7.05□□□□□ -1.28
CPS1-207ENST00000479988 ATP8B2P98198 1209 aa7.05□□□□□ -1.28
CPS1-207ENST00000479988 CSPP1Q1MSJ5 1256 aa7.05□□□□□ -1.28
CPS1-207ENST00000479988 RC3H1Q5TC82 1133 aaKnown RBP7.05□□□□□ -1.28
CPS1-207ENST00000479988 CEP85Q6P2H3 762 aa7.05□□□□□ -1.28
CPS1-207ENST00000479988 GIGYF2Q6Y7W6 1299 aaKnown RBP7.05□□□□□ -1.28
CPS1-207ENST00000479988 USP48Q86UV5 1035 aa7.05□□□□□ -1.28
CPS1-207ENST00000479988 PICALMQ13492 652 aa7.05□□□□□ -1.28
CPS1-207ENST00000479988 PRKG1Q13976 671 aa7.05□□□□□ -1.28
CPS1-207ENST00000479988 CCDC96Q2M329 555 aa7.05□□□□□ -1.28
CPS1-207ENST00000479988 IL17REQ8NFR9 667 aa7.05□□□□□ -1.28
CPS1-207ENST00000479988 B4DLN1 442 aa7.05□□□□□ -1.28
CPS1-207ENST00000479988 ERVV-1B6SEH8 477 aa7.05□□□□□ -1.28
CPS1-207ENST00000479988 MRPL12P52815 198 aaKnown RBP7.05□□□□□ -1.28
CPS1-207ENST00000479988 TBC1D9Q6ZT07 1266 aa7.05□□□□□ -1.28
CPS1-207ENST00000479988 ARMC9Q7Z3E5 817 aa7.05□□□□□ -1.28
CPS1-207ENST00000479988 NAP1L5Q96NT1 182 aaPredicted RBP7.05□□□□□ -1.28
CPS1-207ENST00000479988 TMOD4Q9NZQ9 345 aa7.05□□□□□ -1.28
CPS1-207ENST00000479988 DENND2AQ9ULE3 1009 aa7.05□□□□□ -1.28
CPS1-207ENST00000479988 ATP6V1DQ9Y5K8 247 aa7.05□□□□□ -1.28
CPS1-207ENST00000479988 HEG1Q9ULI3 1381 aa7.05□□□□□ -1.28
CPS1-207ENST00000479988 PLSCR1O15162 318 aa7.04□□□□□ -1.28
CPS1-207ENST00000479988 KCTD17Q8N5Z5 321 aa7.04□□□□□ -1.28
CPS1-207ENST00000479988 C2orf69Q8N8R5 385 aa7.04□□□□□ -1.28
CPS1-207ENST00000479988 SH2D4AQ9H788 454 aa7.04□□□□□ -1.28
CPS1-207ENST00000479988 IVNS1ABPQ9Y6Y0 642 aa7.04□□□□□ -1.28
CPS1-207ENST00000479988 CARMIL3Q8ND23 1372 aa7.04□□□□□ -1.28
CPS1-207ENST00000479988 GLRX3O76003 335 aaKnown RBP7.04□□□□□ -1.28
CPS1-207ENST00000479988 MCM4P33991 863 aa7.04□□□□□ -1.28
CPS1-207ENST00000479988 CWF19L2Q2TBE0 894 aaKnown RBP7.04□□□□□ -1.28
CPS1-207ENST00000479988 SUPT20HL1Q3ZLR7 823 aa7.04□□□□□ -1.28
CPS1-207ENST00000479988 MEIS3Q99687 375 aa7.04□□□□□ -1.28
CPS1-207ENST00000479988 EXOC6BQ9Y2D4 811 aa7.04□□□□□ -1.28
CPS1-207ENST00000479988 H3BQV1 296 aa7.04□□□□□ -1.28
CPS1-207ENST00000479988 EPB41L2O43491 1005 aaKnown RBP7.04□□□□□ -1.28
CPS1-207ENST00000479988 MX1P20591 662 aa7.04□□□□□ -1.28
CPS1-207ENST00000479988 IFFO2Q5TF58 517 aa7.04□□□□□ -1.28
CPS1-207ENST00000479988 VTI1AQ96AJ9 217 aa7.04□□□□□ -1.28
CPS1-207ENST00000479988 BRIP1Q9BX63 1249 aa7.04□□□□□ -1.28
CPS1-207ENST00000479988 RNF41Q9H4P4 317 aaPredicted RBP7.04□□□□□ -1.28
CPS1-207ENST00000479988 PDE4BQ07343 736 aa7.04□□□□□ -1.28
CPS1-207ENST00000479988 TRAF1Q13077 416 aa7.04□□□□□ -1.28
CPS1-207ENST00000479988 SF3A1Q15459 793 aaKnown RBP7.04□□□□□ -1.28
CPS1-207ENST00000479988 SMCR8Q8TEV9 937 aaPredicted RBP7.04□□□□□ -1.28
CPS1-207ENST00000479988 ADAMTSL3P82987 1691 aa7.04□□□□□ -1.28
CPS1-207ENST00000479988 KIF20BQ96Q89 1820 aa7.04□□□□□ -1.28
CPS1-207ENST00000479988 COL15A1P39059 1388 aa7.03□□□□□ -1.28
CPS1-207ENST00000479988 PSMA5P28066 241 aa7.03□□□□□ -1.28
CPS1-207ENST00000479988 IQCA1Q86XH1 822 aa7.03□□□□□ -1.28
CPS1-207ENST00000479988 CERS3Q8IU89 383 aa7.03□□□□□ -1.28
CPS1-207ENST00000479988 SNRKQ9NRH2 765 aa7.03□□□□□ -1.28
CPS1-207ENST00000479988 CYP7A1P22680 504 aa7.03□□□□□ -1.28
CPS1-207ENST00000479988 CHMP4BP1P59074 171 aa7.03□□□□□ -1.28
CPS1-207ENST00000479988 TTC6Q86TZ1 520 aa7.03□□□□□ -1.28
CPS1-207ENST00000479988 PLEKHM2Q8IWE5 1019 aa7.03□□□□□ -1.28
CPS1-207ENST00000479988 ANKRD26Q9UPS8 1709 aa7.03□□□□□ -1.28
CPS1-207ENST00000479988 GTF2IP78347 998 aa7.03□□□□□ -1.28
CPS1-207ENST00000479988 PABPC4Q13310 644 aaKnown RBP eCLIP7.03□□□□□ -1.28
CPS1-207ENST00000479988 CCDC8Q9H0W5 538 aaPredicted RBP7.03□□□□□ -1.28
CPS1-207ENST00000479988 BCCIPQ9P287 314 aaKnown RBP eCLIP7.03□□□□□ -1.28
CPS1-207ENST00000479988 XDHP47989 1333 aa7.03□□□□□ -1.28
CPS1-207ENST00000479988 MYO5BQ9ULV0 1848 aa7.03□□□□□ -1.28
CPS1-207ENST00000479988 PUM3Q15397 648 aaKnown RBP7.03□□□□□ -1.28
CPS1-207ENST00000479988 TTLL7Q6ZT98 887 aa7.03□□□□□ -1.28
CPS1-207ENST00000479988 AOX1Q06278 1338 aa7.03□□□□□ -1.28
CPS1-207ENST00000479988 NCAPD2Q15021 1401 aa7.02□□□□□ -1.28
CPS1-207ENST00000479988 A0A0G2JLW4 131 aa7.02□□□□□ -1.29
CPS1-207ENST00000479988 ANAPC15P60006 121 aa7.02□□□□□ -1.29
CPS1-207ENST00000479988 TEKT1Q969V4 418 aa7.02□□□□□ -1.29
CPS1-207ENST00000479988 BOLA2Q9H3K6 86 aa7.02□□□□□ -1.29
CPS1-207ENST00000479988 KDRP35968 1356 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms