RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 NHSL1Q5SYE7 1610 aa22.73■■□□□ 1.23
TNFRSF8-204ENST00000479933 EYA2O00167 538 aa22.73■■□□□ 1.23
TNFRSF8-204ENST00000479933 ST3GAL1Q11201 340 aa22.72■■□□□ 1.23
TNFRSF8-204ENST00000479933 CCDC183Q5T5S1 534 aa22.72■■□□□ 1.23
TNFRSF8-204ENST00000479933 ZBTB3Q9H5J0 574 aa22.72■■□□□ 1.23
TNFRSF8-204ENST00000479933 TMOD3Q9NYL9 352 aa22.72■■□□□ 1.23
TNFRSF8-204ENST00000479933 ISCA1Q9BUE6 129 aa22.72■■□□□ 1.23
TNFRSF8-204ENST00000479933 HELLSQ9NRZ9 838 aa22.72■■□□□ 1.23
TNFRSF8-204ENST00000479933 FBXO3Q9UK99 471 aa22.72■■□□□ 1.23
TNFRSF8-204ENST00000479933 TOGARAM1Q9Y4F4 1720 aa22.72■■□□□ 1.23
TNFRSF8-204ENST00000479933 STRN4Q9NRL3 753 aa22.71■■□□□ 1.23
TNFRSF8-204ENST00000479933 TRIM28Q13263 835 aaKnown RBP22.7■■□□□ 1.23
TNFRSF8-204ENST00000479933 NECAB1Q8N987 351 aa22.7■■□□□ 1.23
TNFRSF8-204ENST00000479933 NEUROD6Q96NK8 337 aa22.7■■□□□ 1.23
TNFRSF8-204ENST00000479933 PAG1Q9NWQ8 432 aa22.7■■□□□ 1.23
TNFRSF8-204ENST00000479933 LARP1BQ659C4 914 aaKnown RBP22.7■■□□□ 1.22
TNFRSF8-204ENST00000479933 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.7■■□□□ 1.22
TNFRSF8-204ENST00000479933 NEK1Q96PY6 1258 aa22.7■■□□□ 1.22
TNFRSF8-204ENST00000479933 ZHX1Q9UKY1 873 aaPredicted RBP22.7■■□□□ 1.22
TNFRSF8-204ENST00000479933 TCIRG1Q13488 830 aa22.69■■□□□ 1.22
TNFRSF8-204ENST00000479933 TOB2Q14106 344 aaPredicted RBP22.69■■□□□ 1.22
TNFRSF8-204ENST00000479933 DDX46Q7L014 1031 aaKnown RBP22.69■■□□□ 1.22
TNFRSF8-204ENST00000479933 FAM184AQ8NB25 1140 aa22.69■■□□□ 1.22
TNFRSF8-204ENST00000479933 CCDC39Q9UFE4 941 aa22.69■■□□□ 1.22
TNFRSF8-204ENST00000479933 VPS37CA5D8V6 355 aaPredicted RBP22.69■■□□□ 1.22
TNFRSF8-204ENST00000479933 HMGB1P09429 215 aaKnown RBP22.69■■□□□ 1.22
TNFRSF8-204ENST00000479933 KIF6Q6ZMV9 814 aa22.67■■□□□ 1.22
TNFRSF8-204ENST00000479933 ZNF335Q9H4Z2 1342 aaPredicted RBP22.67■■□□□ 1.22
TNFRSF8-204ENST00000479933 LRRFIP1Q32MZ4 808 aaKnown RBP22.67■■□□□ 1.22
TNFRSF8-204ENST00000479933 DSCC1Q9BVC3 393 aa22.67■■□□□ 1.22
TNFRSF8-204ENST00000479933 FIBPO43427 364 aa22.66■■□□□ 1.22
TNFRSF8-204ENST00000479933 PDE4CQ08493 712 aa22.66■■□□□ 1.22
TNFRSF8-204ENST00000479933 CEP126Q9P2H0 1117 aa22.66■■□□□ 1.22
TNFRSF8-204ENST00000479933 TAF6LQ9Y6J9 622 aa22.66■■□□□ 1.22
TNFRSF8-204ENST00000479933 GOLIM4O00461 696 aa22.66■■□□□ 1.22
TNFRSF8-204ENST00000479933 CCDC57Q2TAC2 916 aa22.66■■□□□ 1.22
TNFRSF8-204ENST00000479933 UVSSAQ2YD98 709 aa22.66■■□□□ 1.22
TNFRSF8-204ENST00000479933 MYRIPQ8NFW9 859 aa22.66■■□□□ 1.22
TNFRSF8-204ENST00000479933 PLA2G12BQ9BX93 195 aa22.66■■□□□ 1.22
TNFRSF8-204ENST00000479933 AKAP2Q9Y2D5 859 aa22.66■■□□□ 1.22
TNFRSF8-204ENST00000479933 NDUFB9Q9Y6M9 179 aa22.66■■□□□ 1.22
TNFRSF8-204ENST00000479933 STARD3NLO95772 234 aa22.65■■□□□ 1.22
TNFRSF8-204ENST00000479933 PCCAP05165 728 aaPredicted RBP22.65■■□□□ 1.22
TNFRSF8-204ENST00000479933 TIMM10P62072 90 aa22.65■■□□□ 1.22
TNFRSF8-204ENST00000479933 DNM1Q05193 864 aaKnown RBP22.65■■□□□ 1.22
TNFRSF8-204ENST00000479933 ZMYM1Q5SVZ6 1142 aa22.65■■□□□ 1.22
TNFRSF8-204ENST00000479933 A0A1B0GUL7 405 aa22.64■■□□□ 1.22
TNFRSF8-204ENST00000479933 IFIT1P09914 478 aaKnown RBP22.64■■□□□ 1.22
TNFRSF8-204ENST00000479933 KRT85P78386 507 aa22.64■■□□□ 1.22
TNFRSF8-204ENST00000479933 LRRC24Q50LG9 513 aa22.64■■□□□ 1.22
TNFRSF8-204ENST00000479933 CCDC129Q6ZRS4 1044 aa22.64■■□□□ 1.22
TNFRSF8-204ENST00000479933 CYP21A2P08686 494 aa22.64■■□□□ 1.21
TNFRSF8-204ENST00000479933 GTF2F1P35269 517 aaKnown RBP eCLIP22.64■■□□□ 1.21
TNFRSF8-204ENST00000479933 TCEANC2Q96MN5 208 aa22.64■■□□□ 1.21
TNFRSF8-204ENST00000479933 SEC62Q99442 399 aaKnown RBP22.64■■□□□ 1.21
TNFRSF8-204ENST00000479933 ELP1O95163 1332 aa22.63■■□□□ 1.21
TNFRSF8-204ENST00000479933 GTF3C6Q969F1 213 aa22.63■■□□□ 1.21
TNFRSF8-204ENST00000479933 PRDM10Q9NQV6 1147 aa22.63■■□□□ 1.21
TNFRSF8-204ENST00000479933 ZNF594Q96JF6 807 aaPredicted RBP22.63■■□□□ 1.21
TNFRSF8-204ENST00000479933 PRIMPOLQ96LW4 560 aa22.63■■□□□ 1.21
TNFRSF8-204ENST00000479933 RNF113AO15541 343 aaKnown RBP22.62■■□□□ 1.21
TNFRSF8-204ENST00000479933 ITGB4P16144 1822 aa22.62■■□□□ 1.21
TNFRSF8-204ENST00000479933 COL9A3Q14050 684 aaPredicted RBP22.61■■□□□ 1.21
TNFRSF8-204ENST00000479933 CCDC158Q5M9N0 1113 aa22.61■■□□□ 1.21
TNFRSF8-204ENST00000479933 Q6ZUG5 572 aa22.61■■□□□ 1.21
TNFRSF8-204ENST00000479933 ZBTB38Q8NAP3 1195 aaPredicted RBP22.61■■□□□ 1.21
TNFRSF8-204ENST00000479933 PPP4R3BQ5MIZ7 849 aa22.61■■□□□ 1.21
TNFRSF8-204ENST00000479933 RNF214Q8ND24 703 aa22.61■■□□□ 1.21
TNFRSF8-204ENST00000479933 PIGBQ92521 554 aa22.61■■□□□ 1.21
TNFRSF8-204ENST00000479933 CCDC9Q9Y3X0 531 aaKnown RBP22.61■■□□□ 1.21
TNFRSF8-204ENST00000479933 LAMA4Q16363 1823 aa22.61■■□□□ 1.21
TNFRSF8-204ENST00000479933 ABCC12Q96J65 1359 aa22.61■■□□□ 1.21
TNFRSF8-204ENST00000479933 HSP90AB3PQ58FF7 597 aa22.6■■□□□ 1.21
TNFRSF8-204ENST00000479933 TAF3Q5VWG9 929 aa22.6■■□□□ 1.21
TNFRSF8-204ENST00000479933 CDC37L1Q7L3B6 337 aa22.6■■□□□ 1.21
TNFRSF8-204ENST00000479933 DHX32Q7L7V1 743 aaKnown RBP22.6■■□□□ 1.21
TNFRSF8-204ENST00000479933 DNAJC10Q8IXB1 793 aa22.6■■□□□ 1.21
TNFRSF8-204ENST00000479933 CHMP4CQ96CF2 233 aa22.6■■□□□ 1.21
TNFRSF8-204ENST00000479933 LLPHQ9BRT6 129 aaKnown RBP22.6■■□□□ 1.21
TNFRSF8-204ENST00000479933 SCAND2PQ9GZW5 306 aaPredicted RBP22.6■■□□□ 1.21
TNFRSF8-204ENST00000479933 LRP6O75581 1613 aa22.6■■□□□ 1.21
TNFRSF8-204ENST00000479933 MAP3K15Q6ZN16 1313 aa22.6■■□□□ 1.21
TNFRSF8-204ENST00000479933 CDHR2Q9BYE9 1310 aa22.6■■□□□ 1.21
TNFRSF8-204ENST00000479933 COL14A1Q05707 1796 aaKnown RBP22.6■■□□□ 1.21
TNFRSF8-204ENST00000479933 CSF1RP07333 972 aa22.6■■□□□ 1.21
TNFRSF8-204ENST00000479933 ZFYP08048 801 aaPredicted RBP22.59■■□□□ 1.21
TNFRSF8-204ENST00000479933 HSP90B1P14625 803 aaKnown RBP22.59■■□□□ 1.21
TNFRSF8-204ENST00000479933 HMGN5P82970 282 aaKnown RBP22.59■■□□□ 1.21
TNFRSF8-204ENST00000479933 GORABQ5T7V8 394 aa22.59■■□□□ 1.21
TNFRSF8-204ENST00000479933 PUS3Q9BZE2 481 aaKnown RBP22.59■■□□□ 1.21
TNFRSF8-204ENST00000479933 ASAP1Q9ULH1 1129 aa22.59■■□□□ 1.21
TNFRSF8-204ENST00000479933 STK3Q13188 491 aa22.58■■□□□ 1.21
TNFRSF8-204ENST00000479933 TAF7LQ5H9L4 462 aa22.58■■□□□ 1.21
TNFRSF8-204ENST00000479933 GIGYF2Q6Y7W6 1299 aaKnown RBP22.58■■□□□ 1.21
TNFRSF8-204ENST00000479933 IFIT5Q13325 482 aaKnown RBP22.58■■□□□ 1.2
TNFRSF8-204ENST00000479933 TTC39AQ5SRH9 613 aa22.58■■□□□ 1.2
TNFRSF8-204ENST00000479933 ZNF330Q9Y3S2 320 aaPredicted RBP22.58■■□□□ 1.2
TNFRSF8-204ENST00000479933 CHGBP05060 677 aa22.57■■□□□ 1.2
TNFRSF8-204ENST00000479933 ANKRD36CQ5JPF3 1778 aa22.57■■□□□ 1.2
TNFRSF8-204ENST00000479933 DISP2A7MBM2 1401 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms