RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 TMC4Q7Z404 712 aa14.82□□□□□ -0.04
CCDC18-208ENST00000479653 EYA3Q99504 573 aa14.82□□□□□ -0.04
CCDC18-208ENST00000479653 POLLQ9UGP5 575 aa14.82□□□□□ -0.04
CCDC18-208ENST00000479653 RTL9Q8NET4 1388 aa14.82□□□□□ -0.04
CCDC18-208ENST00000479653 VIL1P09327 827 aaKnown RBP14.81□□□□□ -0.04
CCDC18-208ENST00000479653 TRMT112Q9UI30 125 aaKnown RBP14.81□□□□□ -0.04
CCDC18-208ENST00000479653 GPSM2P81274 684 aa14.8□□□□□ -0.04
CCDC18-208ENST00000479653 TCIRG1Q13488 830 aa14.8□□□□□ -0.04
CCDC18-208ENST00000479653 ZNF428Q96B54 188 aa14.8□□□□□ -0.04
CCDC18-208ENST00000479653 THUMPD2Q9BTF0 503 aaKnown RBP14.8□□□□□ -0.04
CCDC18-208ENST00000479653 TMEM106CQ9BVX2 250 aa14.8□□□□□ -0.04
CCDC18-208ENST00000479653 CFHR5Q9BXR6 569 aa14.8□□□□□ -0.04
CCDC18-208ENST00000479653 ZC3H12CQ9C0D7 883 aaKnown RBP14.8□□□□□ -0.04
CCDC18-208ENST00000479653 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.8□□□□□ -0.04
CCDC18-208ENST00000479653 TIMELESSQ9UNS1 1208 aa14.8□□□□□ -0.04
CCDC18-208ENST00000479653 CENPFP49454 3210 aa14.79□□□□□ -0.04
CCDC18-208ENST00000479653 HTATSF1O43719 755 aaKnown RBP14.79□□□□□ -0.04
CCDC18-208ENST00000479653 ALDH1A1P00352 501 aa14.79□□□□□ -0.04
CCDC18-208ENST00000479653 U2AF1L5P0DN76 240 aaPredicted RBP14.79□□□□□ -0.04
CCDC18-208ENST00000479653 POLR2AP24928 1970 aaKnown RBP14.79□□□□□ -0.04
CCDC18-208ENST00000479653 NF2P35240 595 aa14.79□□□□□ -0.04
CCDC18-208ENST00000479653 U2AF1Q01081 240 aaKnown RBP eCLIP14.79□□□□□ -0.04
CCDC18-208ENST00000479653 PTPN22Q9Y2R2 807 aa14.79□□□□□ -0.04
CCDC18-208ENST00000479653 HTTP42858 3142 aa14.79□□□□□ -0.04
CCDC18-208ENST00000479653 H0YGN5 161 aa14.78□□□□□ -0.04
CCDC18-208ENST00000479653 ZEB1P37275 1124 aaPredicted RBP14.78□□□□□ -0.04
CCDC18-208ENST00000479653 ZNF280AP59817 542 aaPredicted RBP14.78□□□□□ -0.04
CCDC18-208ENST00000479653 EIF4A1P60842 406 aaKnown RBP14.78□□□□□ -0.04
CCDC18-208ENST00000479653 PRKG1Q13976 671 aa14.78□□□□□ -0.04
CCDC18-208ENST00000479653 PNISRQ8TF01 805 aaKnown RBP14.78□□□□□ -0.04
CCDC18-208ENST00000479653 MYOZ2Q9NPC6 264 aa14.78□□□□□ -0.04
CCDC18-208ENST00000479653 NUDCQ9Y266 331 aa14.78□□□□□ -0.04
CCDC18-208ENST00000479653 NUP98P52948 1817 aa14.78□□□□□ -0.04
CCDC18-208ENST00000479653 TRIOBPQ9H2D6 2365 aa14.77□□□□□ -0.04
CCDC18-208ENST00000479653 COL3A1P02461 1466 aaPredicted RBP14.77□□□□□ -0.04
CCDC18-208ENST00000479653 SH3TC1Q8TE82 1336 aa14.77□□□□□ -0.04
CCDC18-208ENST00000479653 USP17L8P0C7I0 530 aa14.77□□□□□ -0.05
CCDC18-208ENST00000479653 RSBN1LQ6PCB5 846 aaPredicted RBP14.77□□□□□ -0.05
CCDC18-208ENST00000479653 CHRDL2Q6WN34 429 aa14.77□□□□□ -0.05
CCDC18-208ENST00000479653 NLRP10Q86W26 655 aa14.77□□□□□ -0.05
CCDC18-208ENST00000479653 TBC1D16Q8TBP0 767 aa14.77□□□□□ -0.05
CCDC18-208ENST00000479653 CELF1Q92879 486 aaKnown RBP14.77□□□□□ -0.05
CCDC18-208ENST00000479653 CFAP53Q96M91 514 aa14.77□□□□□ -0.05
CCDC18-208ENST00000479653 BRCA2P51587 3418 aa14.77□□□□□ -0.05
CCDC18-208ENST00000479653 PITPNM2Q9BZ72 1349 aa14.76□□□□□ -0.05
CCDC18-208ENST00000479653 EIF2S2P20042 333 aaKnown RBP14.76□□□□□ -0.05
CCDC18-208ENST00000479653 PTPN12Q05209 780 aaKnown RBP14.76□□□□□ -0.05
CCDC18-208ENST00000479653 AGBL3Q8NEM8 1001 aa14.76□□□□□ -0.05
CCDC18-208ENST00000479653 OTUD5Q96G74 571 aa14.76□□□□□ -0.05
CCDC18-208ENST00000479653 DUOX1Q9NRD9 1551 aa14.76□□□□□ -0.05
CCDC18-208ENST00000479653 PAPPA2Q9BXP8 1791 aa14.75□□□□□ -0.05
CCDC18-208ENST00000479653 PER1O15534 1290 aaPredicted RBP14.75□□□□□ -0.05
CCDC18-208ENST00000479653 AIMP1Q12904 312 aaKnown RBP14.75□□□□□ -0.05
CCDC18-208ENST00000479653 HSP90AB3PQ58FF7 597 aa14.75□□□□□ -0.05
CCDC18-208ENST00000479653 SPRYD7Q5W111 196 aa14.75□□□□□ -0.05
CCDC18-208ENST00000479653 ARMC9Q7Z3E5 817 aa14.75□□□□□ -0.05
CCDC18-208ENST00000479653 CD99L2Q8TCZ2 262 aa14.75□□□□□ -0.05
CCDC18-208ENST00000479653 ARMC5Q96C12 935 aa14.75□□□□□ -0.05
CCDC18-208ENST00000479653 ERO1AQ96HE7 468 aa14.75□□□□□ -0.05
CCDC18-208ENST00000479653 EFCC1Q9HA90 598 aa14.75□□□□□ -0.05
CCDC18-208ENST00000479653 CEP290O15078 2479 aa14.75□□□□□ -0.05
CCDC18-208ENST00000479653 CUL9Q8IWT3 2517 aa14.74□□□□□ -0.05
CCDC18-208ENST00000479653 MYCP01106 439 aaPredicted RBP14.74□□□□□ -0.05
CCDC18-208ENST00000479653 ANXA1P04083 346 aa14.74□□□□□ -0.05
CCDC18-208ENST00000479653 SLC4A8Q2Y0W8 1093 aa14.74□□□□□ -0.05
CCDC18-208ENST00000479653 NBPF9Q3BBW0 867 aa14.74□□□□□ -0.05
CCDC18-208ENST00000479653 IFNL1Q8IU54 200 aa14.74□□□□□ -0.05
CCDC18-208ENST00000479653 U3KPZ7 1027 aaPredicted RBP14.74□□□□□ -0.05
CCDC18-208ENST00000479653 KIAA0100Q14667 2235 aaKnown RBP14.73□□□□□ -0.05
CCDC18-208ENST00000479653 ERBB4Q15303 1308 aa14.73□□□□□ -0.05
CCDC18-208ENST00000479653 INHBEP58166 350 aa14.73□□□□□ -0.05
CCDC18-208ENST00000479653 ANKIB1Q9P2G1 1089 aa14.73□□□□□ -0.05
CCDC18-208ENST00000479653 RBM27Q9P2N5 1060 aaKnown RBP14.73□□□□□ -0.05
CCDC18-208ENST00000479653 MANSC4A6NHS7 340 aaPredicted RBP14.72□□□□□ -0.05
CCDC18-208ENST00000479653 UFL1O94874 794 aa14.72□□□□□ -0.05
CCDC18-208ENST00000479653 COPS6Q7L5N1 327 aa14.72□□□□□ -0.05
CCDC18-208ENST00000479653 SLC10A4Q96EP9 437 aa14.72□□□□□ -0.05
CCDC18-208ENST00000479653 ANGEL1Q9UNK9 670 aaKnown RBP14.72□□□□□ -0.05
CCDC18-208ENST00000479653 RANBP2P49792 3224 aaKnown RBP14.72□□□□□ -0.05
CCDC18-208ENST00000479653 RPS8P62241 208 aaKnown RBP14.71□□□□□ -0.05
CCDC18-208ENST00000479653 PDIA6Q15084 440 aa14.71□□□□□ -0.05
CCDC18-208ENST00000479653 PROSER3Q2NL68 480 aa14.71□□□□□ -0.05
CCDC18-208ENST00000479653 LRP10Q7Z4F1 713 aa14.71□□□□□ -0.05
CCDC18-208ENST00000479653 NBPF11Q86T75 865 aa14.71□□□□□ -0.05
CCDC18-208ENST00000479653 NECTIN2Q92692 538 aa14.71□□□□□ -0.05
CCDC18-208ENST00000479653 DPF3Q92784 378 aa14.71□□□□□ -0.05
CCDC18-208ENST00000479653 FAM89AQ96GI7 184 aa14.71□□□□□ -0.05
CCDC18-208ENST00000479653 USP17L3A6NCW0 530 aa14.7□□□□□ -0.06
CCDC18-208ENST00000479653 USP17L4A6NCW7 530 aa14.7□□□□□ -0.06
CCDC18-208ENST00000479653 SF3B3Q15393 1217 aaKnown RBP14.7□□□□□ -0.06
CCDC18-208ENST00000479653 SLC9C1Q4G0N8 1177 aa14.7□□□□□ -0.06
CCDC18-208ENST00000479653 RTL5Q5HYW3 569 aaPredicted RBP14.7□□□□□ -0.06
CCDC18-208ENST00000479653 USP17L1Q7RTZ2 530 aa14.7□□□□□ -0.06
CCDC18-208ENST00000479653 OGFOD1Q8N543 542 aa14.7□□□□□ -0.06
CCDC18-208ENST00000479653 XAGE3Q8WTP9 111 aa14.7□□□□□ -0.06
CCDC18-208ENST00000479653 ZNF333Q96JL9 665 aa14.7□□□□□ -0.06
CCDC18-208ENST00000479653 GMLQ99445 158 aa14.7□□□□□ -0.06
CCDC18-208ENST00000479653 GGA1Q9UJY5 639 aa14.7□□□□□ -0.06
CCDC18-208ENST00000479653 FZD1Q9UP38 647 aa14.7□□□□□ -0.06
CCDC18-208ENST00000479653 IGF2BP3O00425 579 aaKnown RBP eCLIP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms