RNA–Protein interactions for RNA: ENST00000479459.1

EPHA1-204, Transcript of EPH receptor A1, humanhuman

TSL 3

Gene EPHA1, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-204ENST00000479459 RIMBP2O15034 1052 aa17.59■□□□□ 0.41
EPHA1-204ENST00000479459 HCLS1P14317 486 aaPredicted RBP17.59■□□□□ 0.41
EPHA1-204ENST00000479459 TAF7Q15545 349 aaPredicted RBP17.59■□□□□ 0.41
EPHA1-204ENST00000479459 DOK7Q18PE1 504 aa17.59■□□□□ 0.41
EPHA1-204ENST00000479459 LRP10Q7Z4F1 713 aa17.59■□□□□ 0.41
EPHA1-204ENST00000479459 RTF1Q92541 710 aaKnown RBP17.59■□□□□ 0.41
EPHA1-204ENST00000479459 MIS18AQ9NYP9 233 aa17.59■□□□□ 0.41
EPHA1-204ENST00000479459 PTPN22Q9Y2R2 807 aa17.59■□□□□ 0.41
EPHA1-204ENST00000479459 SCN9AQ15858 1988 aa17.59■□□□□ 0.41
EPHA1-204ENST00000479459 PER1O15534 1290 aaPredicted RBP17.58■□□□□ 0.4
EPHA1-204ENST00000479459 TMEM106CQ9BVX2 250 aa17.58■□□□□ 0.4
EPHA1-204ENST00000479459 TAF1P21675 1872 aa17.57■□□□□ 0.4
EPHA1-204ENST00000479459 HTATSF1O43719 755 aaKnown RBP17.57■□□□□ 0.4
EPHA1-204ENST00000479459 MKRN3Q13064 507 aaKnown RBP17.57■□□□□ 0.4
EPHA1-204ENST00000479459 COL25A1Q9BXS0 654 aaPredicted RBP17.57■□□□□ 0.4
EPHA1-204ENST00000479459 NSFL1CQ9UNZ2 370 aaKnown RBP17.57■□□□□ 0.4
EPHA1-204ENST00000479459 SCAF8Q9UPN6 1271 aaKnown RBP17.57■□□□□ 0.4
EPHA1-204ENST00000479459 EIF4G2P78344 907 aaKnown RBP eCLIP17.56■□□□□ 0.4
EPHA1-204ENST00000479459 PRAMEF18Q5VWM3 479 aa17.56■□□□□ 0.4
EPHA1-204ENST00000479459 GMLQ99445 158 aa17.56■□□□□ 0.4
EPHA1-204ENST00000479459 ALDH1A1P00352 501 aa17.55■□□□□ 0.4
EPHA1-204ENST00000479459 EIF4A1P60842 406 aaKnown RBP17.55■□□□□ 0.4
EPHA1-204ENST00000479459 GPSM2P81274 684 aa17.55■□□□□ 0.4
EPHA1-204ENST00000479459 NLRP10Q86W26 655 aa17.55■□□□□ 0.4
EPHA1-204ENST00000479459 NECTIN2Q92692 538 aa17.55■□□□□ 0.4
EPHA1-204ENST00000479459 TIMELESSQ9UNS1 1208 aa17.55■□□□□ 0.4
EPHA1-204ENST00000479459 DDX60Q8IY21 1712 aaKnown RBP17.55■□□□□ 0.4
EPHA1-204ENST00000479459 C6orf229H3BNL8 230 aa17.54■□□□□ 0.4
EPHA1-204ENST00000479459 CAP1Q01518 475 aa17.54■□□□□ 0.4
EPHA1-204ENST00000479459 PTPN12Q05209 780 aaKnown RBP17.54■□□□□ 0.4
EPHA1-204ENST00000479459 SPRYD7Q5W111 196 aa17.54■□□□□ 0.4
EPHA1-204ENST00000479459 AGBL3Q8NEM8 1001 aa17.54■□□□□ 0.4
EPHA1-204ENST00000479459 CELF1Q92879 486 aaKnown RBP17.54■□□□□ 0.4
EPHA1-204ENST00000479459 COL4A1P02462 1669 aa17.54■□□□□ 0.4
EPHA1-204ENST00000479459 ERBB4Q15303 1308 aa17.53■□□□□ 0.4
EPHA1-204ENST00000479459 PDIA6Q15084 440 aa17.53■□□□□ 0.4
EPHA1-204ENST00000479459 CC2D1BQ5T0F9 858 aaKnown RBP17.53■□□□□ 0.4
EPHA1-204ENST00000479459 RSBN1LQ6PCB5 846 aaPredicted RBP17.53■□□□□ 0.4
EPHA1-204ENST00000479459 TBC1D16Q8TBP0 767 aa17.53■□□□□ 0.4
EPHA1-204ENST00000479459 ZNF333Q96JL9 665 aa17.53■□□□□ 0.4
EPHA1-204ENST00000479459 EYA3Q99504 573 aa17.53■□□□□ 0.4
EPHA1-204ENST00000479459 MYOZ2Q9NPC6 264 aa17.53■□□□□ 0.4
EPHA1-204ENST00000479459 LDLRAD1Q5T700 205 aa17.52■□□□□ 0.4
EPHA1-204ENST00000479459 IFNL1Q8IU54 200 aa17.52■□□□□ 0.4
EPHA1-204ENST00000479459 PRO3102Q9H379 93 aa17.52■□□□□ 0.4
EPHA1-204ENST00000479459 KDM3BQ7LBC6 1761 aa17.52■□□□□ 0.4
EPHA1-204ENST00000479459 CD99L2Q8TCZ2 262 aa17.51■□□□□ 0.39
EPHA1-204ENST00000479459 ERO1AQ96HE7 468 aa17.51■□□□□ 0.39
EPHA1-204ENST00000479459 LAMA3Q16787 3333 aa17.51■□□□□ 0.39
EPHA1-204ENST00000479459 SH3TC1Q8TE82 1336 aa17.5■□□□□ 0.39
EPHA1-204ENST00000479459 IGF2BP3O00425 579 aaKnown RBP eCLIP17.5■□□□□ 0.39
EPHA1-204ENST00000479459 USP17L8P0C7I0 530 aa17.5■□□□□ 0.39
EPHA1-204ENST00000479459 INHBEP58166 350 aa17.5■□□□□ 0.39
EPHA1-204ENST00000479459 TTLL12Q14166 644 aaPredicted RBP17.5■□□□□ 0.39
EPHA1-204ENST00000479459 PNISRQ8TF01 805 aaKnown RBP17.5■□□□□ 0.39
EPHA1-204ENST00000479459 THUMPD2Q9BTF0 503 aaKnown RBP17.5■□□□□ 0.39
EPHA1-204ENST00000479459 TRMT112Q9UI30 125 aaKnown RBP17.5■□□□□ 0.39
EPHA1-204ENST00000479459 TCIRG1Q13488 830 aa17.49■□□□□ 0.39
EPHA1-204ENST00000479459 SF3B3Q15393 1217 aaKnown RBP17.49■□□□□ 0.39
EPHA1-204ENST00000479459 NBPF9Q3BBW0 867 aa17.49■□□□□ 0.39
EPHA1-204ENST00000479459 MANSC4A6NHS7 340 aaPredicted RBP17.48■□□□□ 0.39
EPHA1-204ENST00000479459 SLC4A8Q2Y0W8 1093 aa17.48■□□□□ 0.39
EPHA1-204ENST00000479459 DPF3Q92784 378 aa17.48■□□□□ 0.39
EPHA1-204ENST00000479459 ZC3H12CQ9C0D7 883 aaKnown RBP17.48■□□□□ 0.39
EPHA1-204ENST00000479459 EFCC1Q9HA90 598 aa17.48■□□□□ 0.39
EPHA1-204ENST00000479459 PODXL2Q9NZ53 605 aa17.48■□□□□ 0.39
EPHA1-204ENST00000479459 PROSER3Q2NL68 480 aa17.47■□□□□ 0.39
EPHA1-204ENST00000479459 HSP90AB3PQ58FF7 597 aa17.47■□□□□ 0.39
EPHA1-204ENST00000479459 ARMC9Q7Z3E5 817 aa17.47■□□□□ 0.39
EPHA1-204ENST00000479459 NF2P35240 595 aa17.46■□□□□ 0.39
EPHA1-204ENST00000479459 LRCH3Q96II8 777 aa17.46■□□□□ 0.39
EPHA1-204ENST00000479459 PSME4Q14997 1843 aa17.46■□□□□ 0.39
EPHA1-204ENST00000479459 SOX1O00570 391 aaPredicted RBP17.45■□□□□ 0.38
EPHA1-204ENST00000479459 CRHR2Q13324 411 aa17.45■□□□□ 0.38
EPHA1-204ENST00000479459 LAMB1P07942 1786 aa17.45■□□□□ 0.38
EPHA1-204ENST00000479459 WNT10BO00744 389 aa17.44■□□□□ 0.38
EPHA1-204ENST00000479459 ANXA1P04083 346 aa17.44■□□□□ 0.38
EPHA1-204ENST00000479459 SP3Q02447 781 aa17.44■□□□□ 0.38
EPHA1-204ENST00000479459 PRKG1Q13976 671 aa17.44■□□□□ 0.38
EPHA1-204ENST00000479459 ZBTB48P10074 688 aaPredicted RBP17.43■□□□□ 0.38
EPHA1-204ENST00000479459 RPS8P62241 208 aaKnown RBP17.43■□□□□ 0.38
EPHA1-204ENST00000479459 MAP3K11Q16584 847 aa17.43■□□□□ 0.38
EPHA1-204ENST00000479459 ANKRD13DQ6ZTN6 518 aa17.43■□□□□ 0.38
EPHA1-204ENST00000479459 PRDM6Q9NQX0 595 aa17.43■□□□□ 0.38
EPHA1-204ENST00000479459 USP17L3A6NCW0 530 aa17.42■□□□□ 0.38
EPHA1-204ENST00000479459 USP17L4A6NCW7 530 aa17.42■□□□□ 0.38
EPHA1-204ENST00000479459 UFL1O94874 794 aa17.42■□□□□ 0.38
EPHA1-204ENST00000479459 U2AF1L5P0DN76 240 aaPredicted RBP17.42■□□□□ 0.38
EPHA1-204ENST00000479459 U2AF1Q01081 240 aaKnown RBP eCLIP17.42■□□□□ 0.38
EPHA1-204ENST00000479459 COPS6Q7L5N1 327 aa17.42■□□□□ 0.38
EPHA1-204ENST00000479459 USP17L1Q7RTZ2 530 aa17.42■□□□□ 0.38
EPHA1-204ENST00000479459 WNK4Q96J92 1243 aa17.42■□□□□ 0.38
EPHA1-204ENST00000479459 ANGEL1Q9UNK9 670 aaKnown RBP17.42■□□□□ 0.38
EPHA1-204ENST00000479459 FZD1Q9UP38 647 aa17.42■□□□□ 0.38
EPHA1-204ENST00000479459 PTCH2Q9Y6C5 1203 aa17.42■□□□□ 0.38
EPHA1-204ENST00000479459 G3V3G9 751 aa17.41■□□□□ 0.38
EPHA1-204ENST00000479459 MYCP01106 439 aaPredicted RBP17.41■□□□□ 0.38
EPHA1-204ENST00000479459 SLC9C1Q4G0N8 1177 aa17.41■□□□□ 0.38
EPHA1-204ENST00000479459 DCAF8Q5TAQ9 597 aa17.41■□□□□ 0.38
EPHA1-204ENST00000479459 NBPF11Q86T75 865 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms