RNA–Protein interactions for RNA: ENST00000479107.1

HLA-DPA1-247, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 5,025 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-247ENST00000479107 MNAT1P51948 309 aa9.97□□□□□ -0.81
HLA-DPA1-247ENST00000479107 PTPRCP08575 1304 aa9.97□□□□□ -0.81
HLA-DPA1-247ENST00000479107 ASXL1Q8IXJ9 1541 aa9.97□□□□□ -0.81
HLA-DPA1-247ENST00000479107 KIAA1328Q86T90 577 aa9.97□□□□□ -0.81
HLA-DPA1-247ENST00000479107 CTNNA3Q9UI47 895 aa9.97□□□□□ -0.81
HLA-DPA1-247ENST00000479107 NSD2O96028 1365 aa9.97□□□□□ -0.81
HLA-DPA1-247ENST00000479107 CDC42BPAQ5VT25 1732 aa9.97□□□□□ -0.81
HLA-DPA1-247ENST00000479107 PTGS1P23219 599 aa9.97□□□□□ -0.81
HLA-DPA1-247ENST00000479107 GNG11P61952 73 aa9.97□□□□□ -0.81
HLA-DPA1-247ENST00000479107 PLCD4Q9BRC7 762 aa9.97□□□□□ -0.81
HLA-DPA1-247ENST00000479107 TRIM34Q9BYJ4 488 aa9.97□□□□□ -0.81
HLA-DPA1-247ENST00000479107 CDC42BPBQ9Y5S2 1711 aa9.97□□□□□ -0.81
HLA-DPA1-247ENST00000479107 RIOK3O14730 519 aaKnown RBP9.97□□□□□ -0.81
HLA-DPA1-247ENST00000479107 F13A1P00488 732 aa9.97□□□□□ -0.81
HLA-DPA1-247ENST00000479107 SLC3A2P08195 630 aaKnown RBP9.97□□□□□ -0.81
HLA-DPA1-247ENST00000479107 PDE6BP35913 854 aa9.96□□□□□ -0.81
HLA-DPA1-247ENST00000479107 VPS53Q5VIR6 699 aa9.96□□□□□ -0.81
HLA-DPA1-247ENST00000479107 AMOTL1Q8IY63 956 aa9.96□□□□□ -0.81
HLA-DPA1-247ENST00000479107 IPO4Q8TEX9 1081 aaKnown RBP9.96□□□□□ -0.81
HLA-DPA1-247ENST00000479107 ERO1AQ96HE7 468 aa9.96□□□□□ -0.81
HLA-DPA1-247ENST00000479107 EIF2AK4Q9P2K8 1649 aaKnown RBP9.96□□□□□ -0.81
HLA-DPA1-247ENST00000479107 U2AF2P26368 475 aaKnown RBP eCLIP9.96□□□□□ -0.81
HLA-DPA1-247ENST00000479107 ZRSR2Q15696 482 aaKnown RBP9.96□□□□□ -0.81
HLA-DPA1-247ENST00000479107 ZGPATQ8N5A5 531 aaKnown RBP9.96□□□□□ -0.81
HLA-DPA1-247ENST00000479107 V9GYY5 206 aaPredicted RBP9.96□□□□□ -0.81
HLA-DPA1-247ENST00000479107 TYRO3Q06418 890 aa9.96□□□□□ -0.82
HLA-DPA1-247ENST00000479107 DNAI1Q9UI46 699 aa9.96□□□□□ -0.82
HLA-DPA1-247ENST00000479107 DIP2AQ14689 1571 aa9.96□□□□□ -0.82
HLA-DPA1-247ENST00000479107 IQCA1LA6NCM1 817 aa9.96□□□□□ -0.82
HLA-DPA1-247ENST00000479107 IMMTQ16891 758 aaKnown RBP9.96□□□□□ -0.82
HLA-DPA1-247ENST00000479107 ZSCAN16Q9H4T2 348 aaPredicted RBP9.96□□□□□ -0.82
HLA-DPA1-247ENST00000479107 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.96□□□□□ -0.82
HLA-DPA1-247ENST00000479107 TBC1D2BQ9UPU7 963 aa9.96□□□□□ -0.82
HLA-DPA1-247ENST00000479107 ARHGAP23Q9P227 1491 aa9.96□□□□□ -0.82
HLA-DPA1-247ENST00000479107 HMGB1P09429 215 aaKnown RBP9.95□□□□□ -0.82
HLA-DPA1-247ENST00000479107 ESYT1Q9BSJ8 1104 aa9.95□□□□□ -0.82
HLA-DPA1-247ENST00000479107 INCENPQ9NQS7 918 aa9.95□□□□□ -0.82
HLA-DPA1-247ENST00000479107 HDAC9Q9UKV0 1011 aa9.95□□□□□ -0.82
HLA-DPA1-247ENST00000479107 PHLPP1O60346 1717 aa9.95□□□□□ -0.82
HLA-DPA1-247ENST00000479107 UTP14CQ5TAP6 766 aaKnown RBP9.95□□□□□ -0.82
HLA-DPA1-247ENST00000479107 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.95□□□□□ -0.82
HLA-DPA1-247ENST00000479107 ARHGEF6Q15052 776 aa9.95□□□□□ -0.82
HLA-DPA1-247ENST00000479107 TNS4Q8IZW8 715 aa9.95□□□□□ -0.82
HLA-DPA1-247ENST00000479107 CNKSR1Q969H4 720 aa9.95□□□□□ -0.82
HLA-DPA1-247ENST00000479107 ZBTB40Q9NUA8 1239 aa9.95□□□□□ -0.82
HLA-DPA1-247ENST00000479107 DACT1Q9NYF0 836 aa9.95□□□□□ -0.82
HLA-DPA1-247ENST00000479107 PLSCR1O15162 318 aa9.95□□□□□ -0.82
HLA-DPA1-247ENST00000479107 TTC31Q49AM3 519 aaPredicted RBP9.95□□□□□ -0.82
HLA-DPA1-247ENST00000479107 CCDC12Q8WUD4 166 aaPredicted RBP9.95□□□□□ -0.82
HLA-DPA1-247ENST00000479107 LTBP4Q8N2S1 1624 aa9.95□□□□□ -0.82
HLA-DPA1-247ENST00000479107 CAPN2P17655 700 aa9.94□□□□□ -0.82
HLA-DPA1-247ENST00000479107 RSPH14Q9UHP6 348 aa9.94□□□□□ -0.82
HLA-DPA1-247ENST00000479107 CRB1P82279 1406 aa9.94□□□□□ -0.82
HLA-DPA1-247ENST00000479107 TUBB4BP68371 445 aa9.94□□□□□ -0.82
HLA-DPA1-247ENST00000479107 TPTE2Q6XPS3 522 aa9.94□□□□□ -0.82
HLA-DPA1-247ENST00000479107 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.94□□□□□ -0.82
HLA-DPA1-247ENST00000479107 VPS37DQ86XT2 251 aa9.94□□□□□ -0.82
HLA-DPA1-247ENST00000479107 ANKRD44Q8N8A2 993 aa9.94□□□□□ -0.82
HLA-DPA1-247ENST00000479107 LARP6Q9BRS8 491 aaKnown RBP9.94□□□□□ -0.82
HLA-DPA1-247ENST00000479107 HSP90AB2PQ58FF8 381 aa9.94□□□□□ -0.82
HLA-DPA1-247ENST00000479107 C2CD5Q86YS7 1000 aa9.94□□□□□ -0.82
HLA-DPA1-247ENST00000479107 WASF1Q92558 559 aa9.94□□□□□ -0.82
HLA-DPA1-247ENST00000479107 SYT17Q9BSW7 474 aa9.94□□□□□ -0.82
HLA-DPA1-247ENST00000479107 USP26Q9BXU7 913 aa9.94□□□□□ -0.82
HLA-DPA1-247ENST00000479107 SIL1Q9H173 461 aa9.94□□□□□ -0.82
HLA-DPA1-247ENST00000479107 LMBRD1Q9NUN5 540 aa9.94□□□□□ -0.82
HLA-DPA1-247ENST00000479107 TNNQ9UQP3 1299 aa9.94□□□□□ -0.82
HLA-DPA1-247ENST00000479107 PER1O15534 1290 aaPredicted RBP9.94□□□□□ -0.82
HLA-DPA1-247ENST00000479107 MMP10P09238 476 aa9.94□□□□□ -0.82
HLA-DPA1-247ENST00000479107 PDE1AP54750 535 aa9.94□□□□□ -0.82
HLA-DPA1-247ENST00000479107 DMTNQ08495 405 aa9.94□□□□□ -0.82
HLA-DPA1-247ENST00000479107 C8orf76Q96K31 380 aa9.94□□□□□ -0.82
HLA-DPA1-247ENST00000479107 PLXNC1O60486 1568 aa9.94□□□□□ -0.82
HLA-DPA1-247ENST00000479107 CCDC69A6NI79 296 aa9.93□□□□□ -0.82
HLA-DPA1-247ENST00000479107 CT47A1Q5JQC4 288 aaPredicted RBP9.93□□□□□ -0.82
HLA-DPA1-247ENST00000479107 CCDC158Q5M9N0 1113 aa9.93□□□□□ -0.82
HLA-DPA1-247ENST00000479107 RNF187Q5TA31 235 aaPredicted RBP9.93□□□□□ -0.82
HLA-DPA1-247ENST00000479107 CNBD1Q8NA66 436 aa9.93□□□□□ -0.82
HLA-DPA1-247ENST00000479107 DNAJC25Q9H1X3 360 aa9.93□□□□□ -0.82
HLA-DPA1-247ENST00000479107 CEP131Q9UPN4 1083 aa9.93□□□□□ -0.82
HLA-DPA1-247ENST00000479107 U3KPZ7 1027 aaPredicted RBP9.93□□□□□ -0.82
HLA-DPA1-247ENST00000479107 ADAMTS13Q76LX8 1427 aa9.93□□□□□ -0.82
HLA-DPA1-247ENST00000479107 EIF5P55010 431 aaKnown RBP9.93□□□□□ -0.82
HLA-DPA1-247ENST00000479107 DNM1Q05193 864 aaKnown RBP9.93□□□□□ -0.82
HLA-DPA1-247ENST00000479107 C10orf67Q8IYJ2 551 aa9.93□□□□□ -0.82
HLA-DPA1-247ENST00000479107 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.93□□□□□ -0.82
HLA-DPA1-247ENST00000479107 BCL2L12Q9HB09 334 aa9.93□□□□□ -0.82
HLA-DPA1-247ENST00000479107 RAI14Q9P0K7 980 aa9.93□□□□□ -0.82
HLA-DPA1-247ENST00000479107 MCM6Q14566 821 aa9.92□□□□□ -0.82
HLA-DPA1-247ENST00000479107 PLCD3Q8N3E9 789 aa9.92□□□□□ -0.82
HLA-DPA1-247ENST00000479107 GOLGA1Q92805 767 aa9.92□□□□□ -0.82
HLA-DPA1-247ENST00000479107 EVI5LQ96CN4 794 aa9.92□□□□□ -0.82
HLA-DPA1-247ENST00000479107 DCTPP1Q9H773 170 aa9.92□□□□□ -0.82
HLA-DPA1-247ENST00000479107 PIK3C2BO00750 1634 aa9.92□□□□□ -0.82
HLA-DPA1-247ENST00000479107 SPA17Q15506 151 aa9.92□□□□□ -0.82
HLA-DPA1-247ENST00000479107 DCAF5Q96JK2 942 aa9.92□□□□□ -0.82
HLA-DPA1-247ENST00000479107 NYXQ9GZU5 481 aa9.92□□□□□ -0.82
HLA-DPA1-247ENST00000479107 A0A1B0GUL7 405 aa9.92□□□□□ -0.82
HLA-DPA1-247ENST00000479107 BIN1O00499 593 aa9.92□□□□□ -0.82
HLA-DPA1-247ENST00000479107 PAFAH1B1P43034 410 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms