RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 OTOP1Q7RTM1 612 aa18.92■□□□□ 0.62
USP11-207ENST00000478596 ARMC5Q96C12 935 aa18.92■□□□□ 0.62
USP11-207ENST00000478596 OTUD5Q96G74 571 aa18.92■□□□□ 0.62
USP11-207ENST00000478596 KCNQ5Q9NR82 932 aa18.92■□□□□ 0.62
USP11-207ENST00000478596 RRP7AQ9Y3A4 280 aaKnown RBP18.92■□□□□ 0.62
USP11-207ENST00000478596 TRIM17Q9Y577 477 aa18.92■□□□□ 0.62
USP11-207ENST00000478596 UBE2Q2LH0YL09 131 aa18.91■□□□□ 0.62
USP11-207ENST00000478596 VIL1P09327 827 aaKnown RBP18.91■□□□□ 0.62
USP11-207ENST00000478596 PRKAR2BP31323 418 aa18.91■□□□□ 0.62
USP11-207ENST00000478596 ZNF280AP59817 542 aaPredicted RBP18.91■□□□□ 0.62
USP11-207ENST00000478596 SCARF1Q14162 830 aa18.91■□□□□ 0.62
USP11-207ENST00000478596 MOB2Q70IA6 237 aa18.91■□□□□ 0.62
USP11-207ENST00000478596 PITPNM2Q9BZ72 1349 aa18.91■□□□□ 0.62
USP11-207ENST00000478596 ECE2O60344 883 aa18.9■□□□□ 0.62
USP11-207ENST00000478596 ALDH1A1P00352 501 aa18.9■□□□□ 0.62
USP11-207ENST00000478596 TAF7Q15545 349 aaPredicted RBP18.9■□□□□ 0.62
USP11-207ENST00000478596 NECTIN2Q92692 538 aa18.9■□□□□ 0.62
USP11-207ENST00000478596 RSPH6AQ9H0K4 717 aa18.9■□□□□ 0.62
USP11-207ENST00000478596 MAPK8IP3Q9UPT6 1336 aa18.9■□□□□ 0.62
USP11-207ENST00000478596 ZNF609O15014 1411 aa18.9■□□□□ 0.62
USP11-207ENST00000478596 RANBP2P49792 3224 aaKnown RBP18.89■□□□□ 0.62
USP11-207ENST00000478596 LRRC37AA6NMS7 1700 aa18.89■□□□□ 0.61
USP11-207ENST00000478596 HTATSF1O43719 755 aaKnown RBP18.89■□□□□ 0.61
USP11-207ENST00000478596 MYL6BP14649 208 aa18.89■□□□□ 0.61
USP11-207ENST00000478596 RIMBP2O15034 1052 aa18.88■□□□□ 0.61
USP11-207ENST00000478596 PTPN22Q9Y2R2 807 aa18.88■□□□□ 0.61
USP11-207ENST00000478596 KIAA0100Q14667 2235 aaKnown RBP18.88■□□□□ 0.61
USP11-207ENST00000478596 H0YGN5 161 aa18.87■□□□□ 0.61
USP11-207ENST00000478596 HCLS1P14317 486 aaPredicted RBP18.87■□□□□ 0.61
USP11-207ENST00000478596 ANKRD36CQ5JPF3 1778 aa18.87■□□□□ 0.61
USP11-207ENST00000478596 PNNQ9H307 717 aaKnown RBP18.87■□□□□ 0.61
USP11-207ENST00000478596 POLLQ9UGP5 575 aa18.87■□□□□ 0.61
USP11-207ENST00000478596 NSFL1CQ9UNZ2 370 aaKnown RBP18.87■□□□□ 0.61
USP11-207ENST00000478596 ERBB4Q15303 1308 aa18.86■□□□□ 0.61
USP11-207ENST00000478596 DCTN1Q14203 1278 aa18.86■□□□□ 0.61
USP11-207ENST00000478596 DOK7Q18PE1 504 aa18.86■□□□□ 0.61
USP11-207ENST00000478596 EYA3Q99504 573 aa18.86■□□□□ 0.61
USP11-207ENST00000478596 CEP290O15078 2479 aa18.85■□□□□ 0.61
USP11-207ENST00000478596 C6orf229H3BNL8 230 aa18.85■□□□□ 0.61
USP11-207ENST00000478596 MKRN3Q13064 507 aaKnown RBP18.85■□□□□ 0.61
USP11-207ENST00000478596 CCDC146Q8IYE0 955 aa18.85■□□□□ 0.61
USP11-207ENST00000478596 AGBL3Q8NEM8 1001 aa18.85■□□□□ 0.61
USP11-207ENST00000478596 MIS18AQ9NYP9 233 aa18.85■□□□□ 0.61
USP11-207ENST00000478596 COL6A3P12111 3177 aa18.85■□□□□ 0.61
USP11-207ENST00000478596 DDX60Q8IY21 1712 aaKnown RBP18.84■□□□□ 0.61
USP11-207ENST00000478596 PNISRQ8TF01 805 aaKnown RBP18.84■□□□□ 0.61
USP11-207ENST00000478596 TMEM106CQ9BVX2 250 aa18.84■□□□□ 0.61
USP11-207ENST00000478596 LAMB2P55268 1798 aa18.83■□□□□ 0.61
USP11-207ENST00000478596 DLG5Q8TDM6 1919 aa18.83■□□□□ 0.6
USP11-207ENST00000478596 INHBEP58166 350 aa18.83■□□□□ 0.6
USP11-207ENST00000478596 TCIRG1Q13488 830 aa18.83■□□□□ 0.6
USP11-207ENST00000478596 TTLL12Q14166 644 aaPredicted RBP18.83■□□□□ 0.6
USP11-207ENST00000478596 ERO1AQ96HE7 468 aa18.83■□□□□ 0.6
USP11-207ENST00000478596 MYOZ2Q9NPC6 264 aa18.83■□□□□ 0.6
USP11-207ENST00000478596 ADAMTS8Q9UP79 889 aa18.83■□□□□ 0.6
USP11-207ENST00000478596 EIF4A1P60842 406 aaKnown RBP18.82■□□□□ 0.6
USP11-207ENST00000478596 GPSM2P81274 684 aa18.82■□□□□ 0.6
USP11-207ENST00000478596 SPRYD7Q5W111 196 aa18.82■□□□□ 0.6
USP11-207ENST00000478596 RSBN1LQ6PCB5 846 aaPredicted RBP18.82■□□□□ 0.6
USP11-207ENST00000478596 CHRDL2Q6WN34 429 aa18.82■□□□□ 0.6
USP11-207ENST00000478596 LRP10Q7Z4F1 713 aa18.82■□□□□ 0.6
USP11-207ENST00000478596 NLRP10Q86W26 655 aa18.82■□□□□ 0.6
USP11-207ENST00000478596 GMLQ99445 158 aa18.82■□□□□ 0.6
USP11-207ENST00000478596 SH3TC1Q8TE82 1336 aa18.81■□□□□ 0.6
USP11-207ENST00000478596 USP17L8P0C7I0 530 aa18.81■□□□□ 0.6
USP11-207ENST00000478596 NF2P35240 595 aa18.81■□□□□ 0.6
USP11-207ENST00000478596 MNX1P50219 401 aaPredicted RBP18.81■□□□□ 0.6
USP11-207ENST00000478596 PTPN12Q05209 780 aaKnown RBP18.81■□□□□ 0.6
USP11-207ENST00000478596 PRAMEF18Q5VWM3 479 aa18.81■□□□□ 0.6
USP11-207ENST00000478596 IFNL1Q8IU54 200 aa18.81■□□□□ 0.6
USP11-207ENST00000478596 TBC1D16Q8TBP0 767 aa18.81■□□□□ 0.6
USP11-207ENST00000478596 ZNF333Q96JL9 665 aa18.81■□□□□ 0.6
USP11-207ENST00000478596 MANSC4A6NHS7 340 aaPredicted RBP18.8■□□□□ 0.6
USP11-207ENST00000478596 HSP90AB3PQ58FF7 597 aa18.8■□□□□ 0.6
USP11-207ENST00000478596 CELF1Q92879 486 aaKnown RBP18.8■□□□□ 0.6
USP11-207ENST00000478596 ZC3H12CQ9C0D7 883 aaKnown RBP18.8■□□□□ 0.6
USP11-207ENST00000478596 RBM27Q9P2N5 1060 aaKnown RBP18.8■□□□□ 0.6
USP11-207ENST00000478596 TRMT112Q9UI30 125 aaKnown RBP18.8■□□□□ 0.6
USP11-207ENST00000478596 SCAF8Q9UPN6 1271 aaKnown RBP18.8■□□□□ 0.6
USP11-207ENST00000478596 LDLRAD1Q5T700 205 aa18.79■□□□□ 0.6
USP11-207ENST00000478596 RUNDC1Q96C34 613 aa18.79■□□□□ 0.6
USP11-207ENST00000478596 EFCC1Q9HA90 598 aa18.79■□□□□ 0.6
USP11-207ENST00000478596 ARMC9Q7Z3E5 817 aa18.78■□□□□ 0.6
USP11-207ENST00000478596 CD99L2Q8TCZ2 262 aa18.78■□□□□ 0.6
USP11-207ENST00000478596 SCN9AQ15858 1988 aa18.78■□□□□ 0.6
USP11-207ENST00000478596 SF3B3Q15393 1217 aaKnown RBP18.77■□□□□ 0.6
USP11-207ENST00000478596 PODXL2Q9NZ53 605 aa18.77■□□□□ 0.6
USP11-207ENST00000478596 KDM3BQ7LBC6 1761 aa18.76■□□□□ 0.59
USP11-207ENST00000478596 PDIA6Q15084 440 aa18.76■□□□□ 0.59
USP11-207ENST00000478596 TAF1P21675 1872 aa18.75■□□□□ 0.59
USP11-207ENST00000478596 G3V3G9 751 aa18.75■□□□□ 0.59
USP11-207ENST00000478596 IGF2BP3O00425 579 aaKnown RBP eCLIP18.75■□□□□ 0.59
USP11-207ENST00000478596 ZBTB48P10074 688 aaPredicted RBP18.75■□□□□ 0.59
USP11-207ENST00000478596 NBPF9Q3BBW0 867 aa18.75■□□□□ 0.59
USP11-207ENST00000478596 DCAF8Q5TAQ9 597 aa18.75■□□□□ 0.59
USP11-207ENST00000478596 NBPF11Q86T75 865 aa18.75■□□□□ 0.59
USP11-207ENST00000478596 THUMPD2Q9BTF0 503 aaKnown RBP18.75■□□□□ 0.59
USP11-207ENST00000478596 PRO3102Q9H379 93 aa18.75■□□□□ 0.59
USP11-207ENST00000478596 NEUROD2Q15784 382 aa18.74■□□□□ 0.59
USP11-207ENST00000478596 SP3Q02447 781 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms