RNA–Protein interactions for RNA: ENST00000478245.1

TCTN3-205, Transcript of tectonic family member 3, humanhuman

TSL 2

Gene TCTN3, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-205ENST00000478245 MKRN3Q13064 507 aaKnown RBP12.46□□□□□ -0.41
TCTN3-205ENST00000478245 SCARF1Q14162 830 aa12.46□□□□□ -0.41
TCTN3-205ENST00000478245 MOB2Q70IA6 237 aa12.46□□□□□ -0.41
TCTN3-205ENST00000478245 EYA3Q99504 573 aa12.46□□□□□ -0.41
TCTN3-205ENST00000478245 TRMT112Q9UI30 125 aaKnown RBP12.46□□□□□ -0.41
TCTN3-205ENST00000478245 RTL9Q8NET4 1388 aa12.45□□□□□ -0.42
TCTN3-205ENST00000478245 HTTP42858 3142 aa12.45□□□□□ -0.42
TCTN3-205ENST00000478245 EIF4A1P60842 406 aaKnown RBP12.45□□□□□ -0.42
TCTN3-205ENST00000478245 SREBF2Q12772 1141 aa12.45□□□□□ -0.42
TCTN3-205ENST00000478245 THUMPD2Q9BTF0 503 aaKnown RBP12.45□□□□□ -0.42
TCTN3-205ENST00000478245 ERBB4Q15303 1308 aa12.44□□□□□ -0.42
TCTN3-205ENST00000478245 SH3TC1Q8TE82 1336 aa12.44□□□□□ -0.42
TCTN3-205ENST00000478245 VIL1P09327 827 aaKnown RBP12.44□□□□□ -0.42
TCTN3-205ENST00000478245 HSP90AB3PQ58FF7 597 aa12.44□□□□□ -0.42
TCTN3-205ENST00000478245 POLLQ9UGP5 575 aa12.44□□□□□ -0.42
TCTN3-205ENST00000478245 TRIM17Q9Y577 477 aa12.44□□□□□ -0.42
TCTN3-205ENST00000478245 A0A0C4DFX4 3053 aa12.43□□□□□ -0.42
TCTN3-205ENST00000478245 NEFMP07197 916 aa12.43□□□□□ -0.42
TCTN3-205ENST00000478245 GPSM2P81274 684 aa12.43□□□□□ -0.42
TCTN3-205ENST00000478245 TCIRG1Q13488 830 aa12.43□□□□□ -0.42
TCTN3-205ENST00000478245 NLRP10Q86W26 655 aa12.43□□□□□ -0.42
TCTN3-205ENST00000478245 ZC3H12CQ9C0D7 883 aaKnown RBP12.43□□□□□ -0.42
TCTN3-205ENST00000478245 COLQQ9Y215 455 aaPredicted RBP12.43□□□□□ -0.42
TCTN3-205ENST00000478245 PSME4Q14997 1843 aa12.43□□□□□ -0.42
TCTN3-205ENST00000478245 PITPNM2Q9BZ72 1349 aa12.42□□□□□ -0.42
TCTN3-205ENST00000478245 DLL1O00548 723 aa12.42□□□□□ -0.42
TCTN3-205ENST00000478245 EIF2S2P20042 333 aaKnown RBP12.42□□□□□ -0.42
TCTN3-205ENST00000478245 NF2P35240 595 aa12.42□□□□□ -0.42
TCTN3-205ENST00000478245 ZNF280AP59817 542 aaPredicted RBP12.42□□□□□ -0.42
TCTN3-205ENST00000478245 PRAMEF18Q5VWM3 479 aa12.42□□□□□ -0.42
TCTN3-205ENST00000478245 R3HDMLQ9H3Y0 253 aa12.42□□□□□ -0.42
TCTN3-205ENST00000478245 SCAF8Q9UPN6 1271 aaKnown RBP12.42□□□□□ -0.42
TCTN3-205ENST00000478245 ALDH1A1P00352 501 aa12.41□□□□□ -0.42
TCTN3-205ENST00000478245 EN2P19622 333 aaPredicted RBP12.41□□□□□ -0.42
TCTN3-205ENST00000478245 OTOP1Q7RTM1 612 aa12.41□□□□□ -0.42
TCTN3-205ENST00000478245 AGBL3Q8NEM8 1001 aa12.41□□□□□ -0.42
TCTN3-205ENST00000478245 TBC1D16Q8TBP0 767 aa12.41□□□□□ -0.42
TCTN3-205ENST00000478245 CELF1Q92879 486 aaKnown RBP12.41□□□□□ -0.42
TCTN3-205ENST00000478245 ZNF428Q96B54 188 aa12.41□□□□□ -0.42
TCTN3-205ENST00000478245 CFHR5Q9BXR6 569 aa12.41□□□□□ -0.42
TCTN3-205ENST00000478245 MYOZ2Q9NPC6 264 aa12.41□□□□□ -0.42
TCTN3-205ENST00000478245 SZT2Q5T011 3432 aa12.4□□□□□ -0.42
TCTN3-205ENST00000478245 ANXA1P04083 346 aa12.4□□□□□ -0.42
TCTN3-205ENST00000478245 USP17L8P0C7I0 530 aa12.4□□□□□ -0.42
TCTN3-205ENST00000478245 AIMP1Q12904 312 aaKnown RBP12.4□□□□□ -0.42
TCTN3-205ENST00000478245 RSBN1LQ6PCB5 846 aaPredicted RBP12.4□□□□□ -0.42
TCTN3-205ENST00000478245 CCER1Q8TC90 406 aaPredicted RBP12.4□□□□□ -0.42
TCTN3-205ENST00000478245 TMEM106CQ9BVX2 250 aa12.4□□□□□ -0.42
TCTN3-205ENST00000478245 UFL1O94874 794 aa12.39□□□□□ -0.43
TCTN3-205ENST00000478245 PROSER3Q2NL68 480 aa12.39□□□□□ -0.43
TCTN3-205ENST00000478245 COPS6Q7L5N1 327 aa12.39□□□□□ -0.43
TCTN3-205ENST00000478245 ARMC9Q7Z3E5 817 aa12.39□□□□□ -0.43
TCTN3-205ENST00000478245 SLC17A8Q8NDX2 589 aa12.39□□□□□ -0.43
TCTN3-205ENST00000478245 NECTIN2Q92692 538 aa12.39□□□□□ -0.43
TCTN3-205ENST00000478245 ANKIB1Q9P2G1 1089 aa12.39□□□□□ -0.43
TCTN3-205ENST00000478245 PTPN12Q05209 780 aaKnown RBP12.38□□□□□ -0.43
TCTN3-205ENST00000478245 PRKG1Q13976 671 aa12.38□□□□□ -0.43
TCTN3-205ENST00000478245 PDIA6Q15084 440 aa12.38□□□□□ -0.43
TCTN3-205ENST00000478245 LRP10Q7Z4F1 713 aa12.38□□□□□ -0.43
TCTN3-205ENST00000478245 ERO1AQ96HE7 468 aa12.38□□□□□ -0.43
TCTN3-205ENST00000478245 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.38□□□□□ -0.43
TCTN3-205ENST00000478245 PTPN22Q9Y2R2 807 aa12.38□□□□□ -0.43
TCTN3-205ENST00000478245 INHBEP58166 350 aa12.37□□□□□ -0.43
TCTN3-205ENST00000478245 RPS8P62241 208 aaKnown RBP12.37□□□□□ -0.43
TCTN3-205ENST00000478245 SF3B3Q15393 1217 aaKnown RBP12.37□□□□□ -0.43
TCTN3-205ENST00000478245 SPRYD7Q5W111 196 aa12.37□□□□□ -0.43
TCTN3-205ENST00000478245 XAGE3Q8WTP9 111 aa12.37□□□□□ -0.43
TCTN3-205ENST00000478245 GGA1Q9UJY5 639 aa12.37□□□□□ -0.43
TCTN3-205ENST00000478245 BRCA2P51587 3418 aa12.37□□□□□ -0.43
TCTN3-205ENST00000478245 CLSPNQ9HAW4 1339 aa12.37□□□□□ -0.43
TCTN3-205ENST00000478245 MANSC4A6NHS7 340 aaPredicted RBP12.36□□□□□ -0.43
TCTN3-205ENST00000478245 NBPF9Q3BBW0 867 aa12.36□□□□□ -0.43
TCTN3-205ENST00000478245 IFNL1Q8IU54 200 aa12.36□□□□□ -0.43
TCTN3-205ENST00000478245 OGFOD1Q8N543 542 aa12.36□□□□□ -0.43
TCTN3-205ENST00000478245 ARMC5Q96C12 935 aa12.36□□□□□ -0.43
TCTN3-205ENST00000478245 FAM89AQ96GI7 184 aa12.36□□□□□ -0.43
TCTN3-205ENST00000478245 EFCC1Q9HA90 598 aa12.36□□□□□ -0.43
TCTN3-205ENST00000478245 TSPYL4Q9UJ04 414 aa12.36□□□□□ -0.43
TCTN3-205ENST00000478245 ZNF609O15014 1411 aa12.36□□□□□ -0.43
TCTN3-205ENST00000478245 USP17L3A6NCW0 530 aa12.35□□□□□ -0.43
TCTN3-205ENST00000478245 USP17L4A6NCW7 530 aa12.35□□□□□ -0.43
TCTN3-205ENST00000478245 H0YGN5 161 aa12.35□□□□□ -0.43
TCTN3-205ENST00000478245 RTL5Q5HYW3 569 aaPredicted RBP12.35□□□□□ -0.43
TCTN3-205ENST00000478245 USP17L1Q7RTZ2 530 aa12.35□□□□□ -0.43
TCTN3-205ENST00000478245 CD99L2Q8TCZ2 262 aa12.35□□□□□ -0.43
TCTN3-205ENST00000478245 SLC10A4Q96EP9 437 aa12.35□□□□□ -0.43
TCTN3-205ENST00000478245 GMLQ99445 158 aa12.35□□□□□ -0.43
TCTN3-205ENST00000478245 PODXL2Q9NZ53 605 aa12.35□□□□□ -0.43
TCTN3-205ENST00000478245 ANGEL1Q9UNK9 670 aaKnown RBP12.35□□□□□ -0.43
TCTN3-205ENST00000478245 COL4A1P02462 1669 aa12.35□□□□□ -0.43
TCTN3-205ENST00000478245 SLC4A8Q2Y0W8 1093 aa12.34□□□□□ -0.43
TCTN3-205ENST00000478245 RANBP2P49792 3224 aaKnown RBP12.33□□□□□ -0.44
TCTN3-205ENST00000478245 NFE2L2Q16236 605 aa12.33□□□□□ -0.44
TCTN3-205ENST00000478245 OTUD7BQ6GQQ9 843 aa12.33□□□□□ -0.44
TCTN3-205ENST00000478245 CHRDL2Q6WN34 429 aa12.33□□□□□ -0.44
TCTN3-205ENST00000478245 NBPF11Q86T75 865 aa12.33□□□□□ -0.44
TCTN3-205ENST00000478245 OTUD5Q96G74 571 aa12.33□□□□□ -0.44
TCTN3-205ENST00000478245 ATP5J2-PTCD1G3V325 749 aa12.32□□□□□ -0.44
TCTN3-205ENST00000478245 WNT10BO00744 389 aa12.32□□□□□ -0.44
TCTN3-205ENST00000478245 IRS4O14654 1257 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms