RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 MCM5P33992 734 aa12.87□□□□□ -0.35
COL27A1-204ENST00000477421 NSFL1CQ9UNZ2 370 aaKnown RBP12.87□□□□□ -0.35
COL27A1-204ENST00000477421 EYA2O00167 538 aa12.86□□□□□ -0.35
COL27A1-204ENST00000477421 TSR1Q2NL82 804 aaKnown RBP12.86□□□□□ -0.35
COL27A1-204ENST00000477421 CFAP100Q494V2 611 aa12.86□□□□□ -0.35
COL27A1-204ENST00000477421 MIGA1Q8NAN2 632 aa12.86□□□□□ -0.35
COL27A1-204ENST00000477421 IRS4O14654 1257 aaPredicted RBP12.86□□□□□ -0.35
COL27A1-204ENST00000477421 PRC1O43663 620 aa12.86□□□□□ -0.35
COL27A1-204ENST00000477421 SLC5A1P13866 664 aa12.86□□□□□ -0.35
COL27A1-204ENST00000477421 RPS6KB1P23443 525 aa12.86□□□□□ -0.35
COL27A1-204ENST00000477421 DHX32Q7L7V1 743 aaKnown RBP12.86□□□□□ -0.35
COL27A1-204ENST00000477421 ERCC4Q92889 916 aaPredicted RBP12.86□□□□□ -0.35
COL27A1-204ENST00000477421 SLC26A6Q9BXS9 759 aa12.86□□□□□ -0.35
COL27A1-204ENST00000477421 STAP2Q9UGK3 403 aa12.86□□□□□ -0.35
COL27A1-204ENST00000477421 JAG2Q9Y219 1238 aa12.86□□□□□ -0.35
COL27A1-204ENST00000477421 LMTK2Q8IWU2 1503 aa12.86□□□□□ -0.35
COL27A1-204ENST00000477421 METAP2P50579 478 aaKnown RBP eCLIP12.86□□□□□ -0.35
COL27A1-204ENST00000477421 CCDC186Q7Z3E2 898 aa12.86□□□□□ -0.35
COL27A1-204ENST00000477421 ADGRB1O14514 1584 aa12.86□□□□□ -0.35
COL27A1-204ENST00000477421 SETBP1Q9Y6X0 1596 aa12.85□□□□□ -0.35
COL27A1-204ENST00000477421 IARSP41252 1262 aaKnown RBP12.85□□□□□ -0.35
COL27A1-204ENST00000477421 LRRC24Q50LG9 513 aa12.85□□□□□ -0.35
COL27A1-204ENST00000477421 DZIP3Q86Y13 1208 aaKnown RBP12.85□□□□□ -0.35
COL27A1-204ENST00000477421 TPCN1Q9ULQ1 816 aa12.85□□□□□ -0.35
COL27A1-204ENST00000477421 NEXMIFQ5QGS0 1516 aa12.85□□□□□ -0.35
COL27A1-204ENST00000477421 RNF113AO15541 343 aaKnown RBP12.85□□□□□ -0.35
COL27A1-204ENST00000477421 ATP6V1AP38606 617 aa12.85□□□□□ -0.35
COL27A1-204ENST00000477421 MNS1Q8NEH6 495 aa12.85□□□□□ -0.35
COL27A1-204ENST00000477421 ZKSCAN5Q9Y2L8 839 aa12.85□□□□□ -0.35
COL27A1-204ENST00000477421 IQGAP1P46940 1657 aa12.85□□□□□ -0.35
COL27A1-204ENST00000477421 SLFNL1Q499Z3 407 aa12.85□□□□□ -0.35
COL27A1-204ENST00000477421 CCDC112Q8NEF3 446 aa12.85□□□□□ -0.35
COL27A1-204ENST00000477421 DBNLQ9UJU6 430 aaKnown RBP12.85□□□□□ -0.35
COL27A1-204ENST00000477421 CPSF1Q10570 1443 aaKnown RBP12.85□□□□□ -0.35
COL27A1-204ENST00000477421 CPS1P31327 1500 aa12.85□□□□□ -0.35
COL27A1-204ENST00000477421 TYRO3Q06418 890 aa12.84□□□□□ -0.35
COL27A1-204ENST00000477421 ZKSCAN3Q9BRR0 538 aa12.84□□□□□ -0.35
COL27A1-204ENST00000477421 TEX13AQ9BXU3 409 aaPredicted RBP12.84□□□□□ -0.35
COL27A1-204ENST00000477421 LSG1Q9H089 658 aaKnown RBP12.84□□□□□ -0.35
COL27A1-204ENST00000477421 ANO10Q9NW15 660 aa12.84□□□□□ -0.35
COL27A1-204ENST00000477421 ZNF589Q86UQ0 364 aaPredicted RBP12.84□□□□□ -0.35
COL27A1-204ENST00000477421 NGLY1Q96IV0 654 aa12.84□□□□□ -0.35
COL27A1-204ENST00000477421 NIP7Q9Y221 180 aaKnown RBP eCLIP12.84□□□□□ -0.35
COL27A1-204ENST00000477421 SASH1O94885 1247 aa12.84□□□□□ -0.35
COL27A1-204ENST00000477421 LARGE1O95461 756 aa12.84□□□□□ -0.35
COL27A1-204ENST00000477421 PUS3Q9BZE2 481 aaKnown RBP12.84□□□□□ -0.35
COL27A1-204ENST00000477421 ERBB3P21860 1342 aa12.83□□□□□ -0.35
COL27A1-204ENST00000477421 AOX1Q06278 1338 aa12.83□□□□□ -0.35
COL27A1-204ENST00000477421 TAF5LO75529 589 aa12.83□□□□□ -0.36
COL27A1-204ENST00000477421 SLC3A2P08195 630 aaKnown RBP12.83□□□□□ -0.36
COL27A1-204ENST00000477421 ZNF445P59923 1031 aa12.83□□□□□ -0.36
COL27A1-204ENST00000477421 CAVIN4Q5BKX8 364 aa12.83□□□□□ -0.36
COL27A1-204ENST00000477421 CCDC24Q8N4L8 307 aa12.83□□□□□ -0.36
COL27A1-204ENST00000477421 KBTBD3Q8NAB2 608 aa12.83□□□□□ -0.36
COL27A1-204ENST00000477421 ANKRD20A12PQ8NF67 263 aa12.83□□□□□ -0.36
COL27A1-204ENST00000477421 EPHA10Q5JZY3 1008 aa12.83□□□□□ -0.36
COL27A1-204ENST00000477421 XAGE2Q96GT9 111 aa12.83□□□□□ -0.36
COL27A1-204ENST00000477421 DIP2CQ9Y2E4 1556 aa12.83□□□□□ -0.36
COL27A1-204ENST00000477421 ITGA6P23229 1130 aa12.83□□□□□ -0.36
COL27A1-204ENST00000477421 PI4K2BQ8TCG2 481 aa12.83□□□□□ -0.36
COL27A1-204ENST00000477421 FAM200AQ8TCP9 573 aa12.83□□□□□ -0.36
COL27A1-204ENST00000477421 ALG1Q9BT22 464 aa12.83□□□□□ -0.36
COL27A1-204ENST00000477421 PCDH11XQ9BZA7 1347 aa12.82□□□□□ -0.36
COL27A1-204ENST00000477421 PCDH11YQ9BZA8 1340 aa12.82□□□□□ -0.36
COL27A1-204ENST00000477421 FSD2A1L4K1 749 aa12.82□□□□□ -0.36
COL27A1-204ENST00000477421 MFSD6Q6ZSS7 791 aa12.82□□□□□ -0.36
COL27A1-204ENST00000477421 ZSCAN16Q9H4T2 348 aaPredicted RBP12.82□□□□□ -0.36
COL27A1-204ENST00000477421 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.82□□□□□ -0.36
COL27A1-204ENST00000477421 A0A1B0GVL5 298 aa12.82□□□□□ -0.36
COL27A1-204ENST00000477421 PKNOX2Q96KN3 472 aa12.82□□□□□ -0.36
COL27A1-204ENST00000477421 ANKIB1Q9P2G1 1089 aa12.82□□□□□ -0.36
COL27A1-204ENST00000477421 IQSEC2Q5JU85 1478 aa12.82□□□□□ -0.36
COL27A1-204ENST00000477421 ZAP70P43403 619 aa12.82□□□□□ -0.36
COL27A1-204ENST00000477421 MYL10Q9BUA6 226 aa12.82□□□□□ -0.36
COL27A1-204ENST00000477421 KDRP35968 1356 aa12.82□□□□□ -0.36
COL27A1-204ENST00000477421 TMEM94Q12767 1356 aa12.82□□□□□ -0.36
COL27A1-204ENST00000477421 DHX8Q14562 1220 aaKnown RBP12.81□□□□□ -0.36
COL27A1-204ENST00000477421 ZBTB43O43298 467 aa12.81□□□□□ -0.36
COL27A1-204ENST00000477421 CYP7A1P22680 504 aa12.81□□□□□ -0.36
COL27A1-204ENST00000477421 NOLC1Q14978 699 aaKnown RBP eCLIP12.81□□□□□ -0.36
COL27A1-204ENST00000477421 CNNM3Q8NE01 707 aa12.81□□□□□ -0.36
COL27A1-204ENST00000477421 TMX1Q9H3N1 280 aa12.81□□□□□ -0.36
COL27A1-204ENST00000477421 SLAIN2Q9P270 581 aa12.81□□□□□ -0.36
COL27A1-204ENST00000477421 B4E1Z4 1266 aa12.81□□□□□ -0.36
COL27A1-204ENST00000477421 IKQ13123 557 aaPredicted RBP12.81□□□□□ -0.36
COL27A1-204ENST00000477421 MAGEB6Q8N7X4 407 aa12.81□□□□□ -0.36
COL27A1-204ENST00000477421 CCDC191Q8NCU4 936 aa12.81□□□□□ -0.36
COL27A1-204ENST00000477421 ASAP1Q9ULH1 1129 aa12.81□□□□□ -0.36
COL27A1-204ENST00000477421 ZNF652Q9Y2D9 606 aa12.81□□□□□ -0.36
COL27A1-204ENST00000477421 SLC4A4Q9Y6R1 1079 aa12.81□□□□□ -0.36
COL27A1-204ENST00000477421 NRXN1Q9ULB1 1477 aa12.81□□□□□ -0.36
COL27A1-204ENST00000477421 ZPR1O75312 459 aa12.8□□□□□ -0.36
COL27A1-204ENST00000477421 IGKV5-2P06315 115 aa12.8□□□□□ -0.36
COL27A1-204ENST00000477421 ZFYP08048 801 aaPredicted RBP12.8□□□□□ -0.36
COL27A1-204ENST00000477421 ATP5JP18859 108 aa12.8□□□□□ -0.36
COL27A1-204ENST00000477421 PTGS1P23219 599 aa12.8□□□□□ -0.36
COL27A1-204ENST00000477421 SFPQP23246 707 aaKnown RBP eCLIP12.8□□□□□ -0.36
COL27A1-204ENST00000477421 DDB1Q16531 1140 aa12.8□□□□□ -0.36
COL27A1-204ENST00000477421 TRIM34Q9BYJ4 488 aa12.8□□□□□ -0.36
COL27A1-204ENST00000477421 MTMR6Q9Y217 621 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms