RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 TAF1P21675 1872 aa35.27■■■■□ 3.24
VEGFA-211ENST00000476772 TRIM6-TRIM34B2RNG4 842 aa35.27■■■■□ 3.24
VEGFA-211ENST00000476772 TIMM10P62072 90 aa35.27■■■■□ 3.24
VEGFA-211ENST00000476772 NEUROD6Q96NK8 337 aa35.27■■■■□ 3.24
VEGFA-211ENST00000476772 A0A1B0GUL7 405 aa35.26■■■■□ 3.23
VEGFA-211ENST00000476772 VGLL2Q8N8G2 317 aa35.25■■■■□ 3.23
VEGFA-211ENST00000476772 AKAP2Q9Y2D5 859 aa35.25■■■■□ 3.23
VEGFA-211ENST00000476772 MAP4K4O95819 1239 aaPredicted RBP35.24■■■■□ 3.23
VEGFA-211ENST00000476772 ST5P78524 1137 aa35.24■■■■□ 3.23
VEGFA-211ENST00000476772 RILPL2Q969X0 211 aa35.24■■■■□ 3.23
VEGFA-211ENST00000476772 MROH5Q6ZUA9 1318 aa35.24■■■■□ 3.23
VEGFA-211ENST00000476772 CCDC125Q86Z20 511 aa35.23■■■■□ 3.23
VEGFA-211ENST00000476772 ANKRD18AQ8IVF6 992 aa35.23■■■■□ 3.23
VEGFA-211ENST00000476772 AK9Q5TCS8 1911 aa35.23■■■■□ 3.23
VEGFA-211ENST00000476772 NRXN2Q9P2S2 1712 aa35.21■■■■□ 3.23
VEGFA-211ENST00000476772 PDE8BO95263 885 aa35.21■■■■□ 3.23
VEGFA-211ENST00000476772 MSL1Q68DK7 614 aa35.21■■■■□ 3.23
VEGFA-211ENST00000476772 CELF1Q92879 486 aaKnown RBP35.21■■■■□ 3.23
VEGFA-211ENST00000476772 ATP2B3Q16720 1220 aa35.2■■■■□ 3.23
VEGFA-211ENST00000476772 ATP5JP18859 108 aa35.19■■■■□ 3.22
VEGFA-211ENST00000476772 HELBQ8NG08 1087 aaPredicted RBP35.19■■■■□ 3.22
VEGFA-211ENST00000476772 BOLA2Q9H3K6 86 aa35.19■■■■□ 3.22
VEGFA-211ENST00000476772 CNTROBQ8N137 903 aa35.18■■■■□ 3.22
VEGFA-211ENST00000476772 MMP10P09238 476 aa35.17■■■■□ 3.22
VEGFA-211ENST00000476772 MFAP1P55081 439 aaKnown RBP35.17■■■■□ 3.22
VEGFA-211ENST00000476772 DDX46Q7L014 1031 aaKnown RBP35.17■■■■□ 3.22
VEGFA-211ENST00000476772 ADORA1P30542 326 aa35.17■■■■□ 3.22
VEGFA-211ENST00000476772 XAGE2Q96GT9 111 aa35.17■■■■□ 3.22
VEGFA-211ENST00000476772 BSDC1Q9NW68 430 aaPredicted RBP35.17■■■■□ 3.22
VEGFA-211ENST00000476772 A0A1B0GUL6 1792 aa35.16■■■■□ 3.22
VEGFA-211ENST00000476772 CHRNDQ07001 517 aa35.15■■■■□ 3.22
VEGFA-211ENST00000476772 CASC1Q6TDU7 716 aa35.15■■■■□ 3.22
VEGFA-211ENST00000476772 RPS8P62241 208 aaKnown RBP35.14■■■■□ 3.22
VEGFA-211ENST00000476772 PUM3Q15397 648 aaKnown RBP35.14■■■■□ 3.22
VEGFA-211ENST00000476772 PARP3Q9Y6F1 533 aa35.14■■■■□ 3.22
VEGFA-211ENST00000476772 TAF5LO75529 589 aa35.14■■■■□ 3.22
VEGFA-211ENST00000476772 ANKRD31Q8N7Z5 1873 aa35.13■■■■□ 3.21
VEGFA-211ENST00000476772 ARAP2Q8WZ64 1704 aa35.13■■■■□ 3.21
VEGFA-211ENST00000476772 FGFR2P21802 821 aa35.13■■■■□ 3.21
VEGFA-211ENST00000476772 CRY2Q49AN0 593 aa35.13■■■■□ 3.21
VEGFA-211ENST00000476772 UPF2Q9HAU5 1272 aaKnown RBP35.13■■■■□ 3.21
VEGFA-211ENST00000476772 GORABQ5T7V8 394 aa35.11■■■■□ 3.21
VEGFA-211ENST00000476772 EVI5LQ96CN4 794 aa35.11■■■■□ 3.21
VEGFA-211ENST00000476772 CHMLP26374 656 aa35.11■■■■□ 3.21
VEGFA-211ENST00000476772 LPIN2Q92539 896 aa35.11■■■■□ 3.21
VEGFA-211ENST00000476772 RPGRQ92834 1020 aaKnown RBP35.1■■■■□ 3.21
VEGFA-211ENST00000476772 MINPP1Q9UNW1 487 aa35.1■■■■□ 3.21
VEGFA-211ENST00000476772 GRAPQ13588 217 aa35.09■■■■□ 3.21
VEGFA-211ENST00000476772 CCDC158Q5M9N0 1113 aa35.09■■■■□ 3.21
VEGFA-211ENST00000476772 GRAPLQ8TC17 118 aaPredicted RBP35.09■■■■□ 3.21
VEGFA-211ENST00000476772 HAUS7Q99871 368 aa35.09■■■■□ 3.21
VEGFA-211ENST00000476772 PDGFDQ9GZP0 370 aaPredicted RBP35.09■■■■□ 3.21
VEGFA-211ENST00000476772 SNAP23O00161 211 aa35.08■■■■□ 3.21
VEGFA-211ENST00000476772 SLC5A1P13866 664 aa35.08■■■■□ 3.21
VEGFA-211ENST00000476772 TTC39AQ5SRH9 613 aa35.08■■■■□ 3.21
VEGFA-211ENST00000476772 NDUFB9Q9Y6M9 179 aa35.08■■■■□ 3.21
VEGFA-211ENST00000476772 KLRG2A4D1S0 409 aaPredicted RBP35.07■■■■□ 3.2
VEGFA-211ENST00000476772 EDC3Q96F86 508 aaKnown RBP35.07■■■■□ 3.2
VEGFA-211ENST00000476772 DNAJC2Q99543 621 aaKnown RBP35.07■■■■□ 3.2
VEGFA-211ENST00000476772 BRIP1Q9BX63 1249 aa35.06■■■■□ 3.2
VEGFA-211ENST00000476772 IFIT1P09914 478 aaKnown RBP35.05■■■■□ 3.2
VEGFA-211ENST00000476772 PPIL4Q8WUA2 492 aaKnown RBP eCLIP35.05■■■■□ 3.2
VEGFA-211ENST00000476772 RBM17Q96I25 401 aaKnown RBP35.05■■■■□ 3.2
VEGFA-211ENST00000476772 TBC1D32Q96NH3 1257 aa35.03■■■■□ 3.2
VEGFA-211ENST00000476772 ESYT1Q9BSJ8 1104 aa35.03■■■■□ 3.2
VEGFA-211ENST00000476772 EIF5BO60841 1220 aaKnown RBP35.02■■■■□ 3.2
VEGFA-211ENST00000476772 HOXA10P31260 410 aaPredicted RBP35.01■■■■□ 3.2
VEGFA-211ENST00000476772 FSD1Q9BTV5 496 aa35.01■■■■□ 3.2
VEGFA-211ENST00000476772 CCDC102BQ68D86 513 aa35.01■■■■□ 3.19
VEGFA-211ENST00000476772 C22orf23Q9BZE7 217 aa35.01■■■■□ 3.19
VEGFA-211ENST00000476772 PHKA1P46020 1223 aa35■■■■□ 3.19
VEGFA-211ENST00000476772 SCARF1Q14162 830 aa35■■■■□ 3.19
VEGFA-211ENST00000476772 ANP32AP39687 249 aaKnown RBP34.99■■■■□ 3.19
VEGFA-211ENST00000476772 ZNF512BQ96KM6 892 aaPredicted RBP34.99■■■■□ 3.19
VEGFA-211ENST00000476772 ANKRD2Q9GZV1 360 aa34.99■■■■□ 3.19
VEGFA-211ENST00000476772 PAG1Q9NWQ8 432 aa34.99■■■■□ 3.19
VEGFA-211ENST00000476772 COL11A2P13942 1736 aaPredicted RBP34.99■■■■□ 3.19
VEGFA-211ENST00000476772 GOLIM4O00461 696 aa34.98■■■■□ 3.19
VEGFA-211ENST00000476772 UBE4AQ14139 1066 aa34.98■■■■□ 3.19
VEGFA-211ENST00000476772 UPF1Q92900 1129 aaKnown RBP eCLIP34.98■■■■□ 3.19
VEGFA-211ENST00000476772 DIAPH3Q9NSV4 1193 aa34.98■■■■□ 3.19
VEGFA-211ENST00000476772 WTIPA6NIX2 430 aaPredicted RBP34.98■■■■□ 3.19
VEGFA-211ENST00000476772 PDE6BP35913 854 aa34.98■■■■□ 3.19
VEGFA-211ENST00000476772 SLC51AQ86UW1 340 aa34.98■■■■□ 3.19
VEGFA-211ENST00000476772 CRAMP1Q96RY5 1269 aa34.98■■■■□ 3.19
VEGFA-211ENST00000476772 IL25Q9H293 177 aa34.97■■■■□ 3.19
VEGFA-211ENST00000476772 SNRKQ9NRH2 765 aa34.97■■■■□ 3.19
VEGFA-211ENST00000476772 AKAP11Q9UKA4 1901 aa34.97■■■■□ 3.19
VEGFA-211ENST00000476772 ARID4AP29374 1257 aaPredicted RBP34.96■■■■□ 3.19
VEGFA-211ENST00000476772 MCAMP43121 646 aa34.96■■■■□ 3.19
VEGFA-211ENST00000476772 REC8O95072 547 aa34.95■■■■□ 3.19
VEGFA-211ENST00000476772 SRGNP10124 158 aa34.95■■■■□ 3.19
VEGFA-211ENST00000476772 FKBP4Q02790 459 aaKnown RBP eCLIP34.95■■■■□ 3.19
VEGFA-211ENST00000476772 CWC27Q6UX04 472 aaKnown RBP34.95■■■■□ 3.19
VEGFA-211ENST00000476772 HIP1O00291 1037 aa34.95■■■■□ 3.18
VEGFA-211ENST00000476772 UQCRFS1P1P0C7P4 283 aa34.95■■■■□ 3.18
VEGFA-211ENST00000476772 KBTBD3Q8NAB2 608 aa34.95■■■■□ 3.18
VEGFA-211ENST00000476772 SLC16A10Q8TF71 515 aa34.95■■■■□ 3.18
VEGFA-211ENST00000476772 RFX7Q2KHR2 1363 aa34.94■■■■□ 3.18
VEGFA-211ENST00000476772 PI16Q6UXB8 463 aa34.94■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms