RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 GHRHP01286 108 aa10.47□□□□□ -0.73
NUP58-209ENST00000476553 PSAPP07602 524 aa10.47□□□□□ -0.73
NUP58-209ENST00000476553 C11orf91Q3C1V1 193 aa10.47□□□□□ -0.73
NUP58-209ENST00000476553 TRIM33Q9UPN9 1127 aa10.47□□□□□ -0.73
NUP58-209ENST00000476553 WISP1O95388 367 aa10.46□□□□□ -0.73
NUP58-209ENST00000476553 NFIAQ12857 509 aa10.46□□□□□ -0.73
NUP58-209ENST00000476553 INTS5Q6P9B9 1019 aaKnown RBP10.46□□□□□ -0.73
NUP58-209ENST00000476553 LARP1Q6PKG0 1096 aaKnown RBP10.46□□□□□ -0.73
NUP58-209ENST00000476553 CACTIN-AS1Q8N1I8 211 aa10.46□□□□□ -0.73
NUP58-209ENST00000476553 MUC3BQ9H195 1237 aa10.46□□□□□ -0.73
NUP58-209ENST00000476553 WEE1P30291 646 aa10.45□□□□□ -0.74
NUP58-209ENST00000476553 UVSSAQ2YD98 709 aa10.45□□□□□ -0.74
NUP58-209ENST00000476553 DTX1Q86Y01 620 aa10.45□□□□□ -0.74
NUP58-209ENST00000476553 GALNT11Q8NCW6 608 aa10.45□□□□□ -0.74
NUP58-209ENST00000476553 TFIP11Q9UBB9 837 aaKnown RBP10.45□□□□□ -0.74
NUP58-209ENST00000476553 KCNMB2Q9Y691 235 aa10.45□□□□□ -0.74
NUP58-209ENST00000476553 TM4SF5O14894 197 aa10.44□□□□□ -0.74
NUP58-209ENST00000476553 CEP41Q9BYV8 373 aa10.44□□□□□ -0.74
NUP58-209ENST00000476553 RBSNQ9H1K0 784 aa10.44□□□□□ -0.74
NUP58-209ENST00000476553 UBTFP17480 764 aaKnown RBP10.43□□□□□ -0.74
NUP58-209ENST00000476553 GRIK1P39086 918 aa10.43□□□□□ -0.74
NUP58-209ENST00000476553 C7orf69Q9H7B7 122 aa10.43□□□□□ -0.74
NUP58-209ENST00000476553 LRFN2Q9ULH4 789 aa10.43□□□□□ -0.74
NUP58-209ENST00000476553 PPME1Q9Y570 386 aa10.43□□□□□ -0.74
NUP58-209ENST00000476553 PRR19A6NJB7 356 aa10.42□□□□□ -0.74
NUP58-209ENST00000476553 FAM196BA6NMK8 535 aa10.42□□□□□ -0.74
NUP58-209ENST00000476553 USP17L15C9J2P7 530 aa10.42□□□□□ -0.74
NUP58-209ENST00000476553 USP17L10C9JJH3 530 aa10.42□□□□□ -0.74
NUP58-209ENST00000476553 USP17L13C9JLJ4 530 aa10.42□□□□□ -0.74
NUP58-209ENST00000476553 USP17L12C9JPN9 530 aa10.42□□□□□ -0.74
NUP58-209ENST00000476553 USP17L11C9JVI0 530 aa10.42□□□□□ -0.74
NUP58-209ENST00000476553 USP17L21D6R901 530 aa10.42□□□□□ -0.74
NUP58-209ENST00000476553 USP17L18D6R9N7 530 aa10.42□□□□□ -0.74
NUP58-209ENST00000476553 USP17L22D6RA61 530 aa10.42□□□□□ -0.74
NUP58-209ENST00000476553 USP17L17D6RBQ6 530 aa10.42□□□□□ -0.74
NUP58-209ENST00000476553 USP17L19D6RCP7 530 aa10.42□□□□□ -0.74
NUP58-209ENST00000476553 USP17L20D6RJB6 530 aa10.42□□□□□ -0.74
NUP58-209ENST00000476553 USP17L24Q0WX57 530 aa10.42□□□□□ -0.74
NUP58-209ENST00000476553 KANK4Q5T7N3 995 aaPredicted RBP10.42□□□□□ -0.74
NUP58-209ENST00000476553 ANKMY2Q8IV38 441 aa10.42□□□□□ -0.74
NUP58-209ENST00000476553 RGL4Q8IZJ4 473 aa10.42□□□□□ -0.74
NUP58-209ENST00000476553 FAM46AQ96IP4 442 aaKnown RBP10.42□□□□□ -0.74
NUP58-209ENST00000476553 DBNDD2Q9BQY9 259 aa10.42□□□□□ -0.74
NUP58-209ENST00000476553 RNF43Q68DV7 783 aa10.41□□□□□ -0.74
NUP58-209ENST00000476553 TREML1Q86YW5 311 aa10.41□□□□□ -0.74
NUP58-209ENST00000476553 UTP4Q969X6 686 aaKnown RBP10.41□□□□□ -0.74
NUP58-209ENST00000476553 FZD5Q13467 585 aa10.4□□□□□ -0.74
NUP58-209ENST00000476553 ACAD11Q709F0 780 aa10.4□□□□□ -0.74
NUP58-209ENST00000476553 TRIM42Q8IWZ5 723 aa10.4□□□□□ -0.74
NUP58-209ENST00000476553 CMTR1Q8N1G2 835 aaKnown RBP10.4□□□□□ -0.74
NUP58-209ENST00000476553 GLMNQ92990 594 aa10.4□□□□□ -0.74
NUP58-209ENST00000476553 CD68P34810 354 aaPredicted RBP10.39□□□□□ -0.75
NUP58-209ENST00000476553 MYRFLQ96LU7 910 aa10.39□□□□□ -0.75
NUP58-209ENST00000476553 KCNK4Q9NYG8 393 aa10.39□□□□□ -0.75
NUP58-209ENST00000476553 TRIP4Q15650 581 aaPredicted RBP10.38□□□□□ -0.75
NUP58-209ENST00000476553 VTI1AQ96AJ9 217 aa10.38□□□□□ -0.75
NUP58-209ENST00000476553 ADGRE2Q9UHX3 823 aa10.38□□□□□ -0.75
NUP58-209ENST00000476553 HMX2A2RU54 273 aa10.37□□□□□ -0.75
NUP58-209ENST00000476553 LINC01387J3KSC0 135 aa10.37□□□□□ -0.75
NUP58-209ENST00000476553 FLIIQ13045 1269 aa10.37□□□□□ -0.75
NUP58-209ENST00000476553 TMEM132AQ24JP5 1023 aa10.37□□□□□ -0.75
NUP58-209ENST00000476553 KIAA1211Q6ZU35 1233 aa10.37□□□□□ -0.75
NUP58-209ENST00000476553 WNT11O96014 354 aa10.35□□□□□ -0.75
NUP58-209ENST00000476553 RANGAP1P46060 587 aaPredicted RBP10.35□□□□□ -0.75
NUP58-209ENST00000476553 NLRP13Q86W25 1043 aa10.35□□□□□ -0.75
NUP58-209ENST00000476553 TXNDC11Q6PKC3 985 aa10.34□□□□□ -0.75
NUP58-209ENST00000476553 OR13H1Q8NG92 308 aa10.34□□□□□ -0.75
NUP58-209ENST00000476553 ATP11AP98196 1134 aa10.33□□□□□ -0.76
NUP58-209ENST00000476553 COL13A1Q5TAT6 717 aaPredicted RBP10.33□□□□□ -0.76
NUP58-209ENST00000476553 ADAMTSL4Q6UY14 1074 aa10.33□□□□□ -0.76
NUP58-209ENST00000476553 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.33□□□□□ -0.76
NUP58-209ENST00000476553 FAM20CQ8IXL6 584 aa10.33□□□□□ -0.76
NUP58-209ENST00000476553 SHKBP1Q8TBC3 707 aa10.33□□□□□ -0.76
NUP58-209ENST00000476553 PPP1R12CQ9BZL4 782 aa10.33□□□□□ -0.76
NUP58-209ENST00000476553 COX20Q5RI15 118 aa10.32□□□□□ -0.76
NUP58-209ENST00000476553 CLEC10AQ8IUN9 316 aa10.32□□□□□ -0.76
NUP58-209ENST00000476553 ETFBKMTQ8IXQ9 262 aa10.32□□□□□ -0.76
NUP58-209ENST00000476553 FOXD4L4Q8WXT5 416 aaPredicted RBP10.32□□□□□ -0.76
NUP58-209ENST00000476553 FAM83CQ9BQN1 747 aa10.32□□□□□ -0.76
NUP58-209ENST00000476553 LACRTQ9GZZ8 138 aa10.32□□□□□ -0.76
NUP58-209ENST00000476553 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.32□□□□□ -0.76
NUP58-209ENST00000476553 ADAM11O75078 769 aa10.31□□□□□ -0.76
NUP58-209ENST00000476553 CDC27P30260 824 aa10.31□□□□□ -0.76
NUP58-209ENST00000476553 FNBP4Q8N3X1 1017 aaPredicted RBP10.31□□□□□ -0.76
NUP58-209ENST00000476553 KLHL23Q8NBE8 558 aa10.31□□□□□ -0.76
NUP58-209ENST00000476553 CARD10Q9BWT7 1032 aa10.31□□□□□ -0.76
NUP58-209ENST00000476553 FSCN2O14926 492 aa10.3□□□□□ -0.76
NUP58-209ENST00000476553 JAG1P78504 1218 aa10.3□□□□□ -0.76
NUP58-209ENST00000476553 DUOXA2Q1HG44 320 aa10.3□□□□□ -0.76
NUP58-209ENST00000476553 UBASH3BQ8TF42 649 aa10.3□□□□□ -0.76
NUP58-209ENST00000476553 SMNDC1O75940 238 aaKnown RBP eCLIP10.29□□□□□ -0.76
NUP58-209ENST00000476553 FKBP5Q13451 457 aaPredicted RBP10.29□□□□□ -0.76
NUP58-209ENST00000476553 CEP135Q66GS9 1140 aa10.29□□□□□ -0.76
NUP58-209ENST00000476553 KIF4AO95239 1232 aa10.28□□□□□ -0.76
NUP58-209ENST00000476553 EPHA1P21709 976 aa10.28□□□□□ -0.76
NUP58-209ENST00000476553 HYAL2Q12891 473 aa10.28□□□□□ -0.76
NUP58-209ENST00000476553 C14orf37Q86TY3 774 aa10.28□□□□□ -0.76
NUP58-209ENST00000476553 KRTAP4-9Q9BYQ8 210 aa10.28□□□□□ -0.76
NUP58-209ENST00000476553 VRTNQ9H8Y1 702 aa10.28□□□□□ -0.76
NUP58-209ENST00000476553 PREPP48147 710 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms