RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 TNS2Q63HR2 1409 aa13.72□□□□□ -0.21
KCNIP3-206ENST00000475491 COL16A1Q07092 1604 aaPredicted RBP13.72□□□□□ -0.21
KCNIP3-206ENST00000475491 APPP05067 770 aa13.72□□□□□ -0.21
KCNIP3-206ENST00000475491 ARHGEF1Q92888 912 aaKnown RBP13.72□□□□□ -0.21
KCNIP3-206ENST00000475491 OSBPL3Q9H4L5 887 aa13.72□□□□□ -0.21
KCNIP3-206ENST00000475491 ABCF2Q9UG63 623 aa13.72□□□□□ -0.21
KCNIP3-206ENST00000475491 TRPC5Q9UL62 973 aaPredicted RBP13.72□□□□□ -0.21
KCNIP3-206ENST00000475491 RTCBQ9Y3I0 505 aaKnown RBP13.72□□□□□ -0.21
KCNIP3-206ENST00000475491 SH3TC1Q8TE82 1336 aa13.72□□□□□ -0.21
KCNIP3-206ENST00000475491 PCCAP05165 728 aaPredicted RBP13.71□□□□□ -0.21
KCNIP3-206ENST00000475491 PHKA1P46020 1223 aa13.71□□□□□ -0.21
KCNIP3-206ENST00000475491 ATP2B3Q16720 1220 aa13.71□□□□□ -0.21
KCNIP3-206ENST00000475491 TTLL5Q6EMB2 1281 aa13.71□□□□□ -0.21
KCNIP3-206ENST00000475491 BARGINQ6ZT62 677 aa13.71□□□□□ -0.21
KCNIP3-206ENST00000475491 NECAB1Q8N987 351 aa13.71□□□□□ -0.21
KCNIP3-206ENST00000475491 GDPD2Q9HCC8 539 aa13.71□□□□□ -0.21
KCNIP3-206ENST00000475491 TFCP2L1Q9NZI6 479 aa13.71□□□□□ -0.21
KCNIP3-206ENST00000475491 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.71□□□□□ -0.22
KCNIP3-206ENST00000475491 BCAMP50895 628 aa13.71□□□□□ -0.22
KCNIP3-206ENST00000475491 RABEP1Q15276 862 aa13.71□□□□□ -0.22
KCNIP3-206ENST00000475491 UTYO14607 1347 aa13.7□□□□□ -0.22
KCNIP3-206ENST00000475491 SGSM2O43147 1006 aa13.7□□□□□ -0.22
KCNIP3-206ENST00000475491 MCCP23508 829 aa13.7□□□□□ -0.22
KCNIP3-206ENST00000475491 RABL6Q3YEC7 729 aaPredicted RBP13.7□□□□□ -0.22
KCNIP3-206ENST00000475491 ABCA3Q99758 1704 aa13.7□□□□□ -0.22
KCNIP3-206ENST00000475491 PANK2Q9BZ23 570 aa13.7□□□□□ -0.22
KCNIP3-206ENST00000475491 IL15P40933 162 aaPredicted RBP13.7□□□□□ -0.22
KCNIP3-206ENST00000475491 SETDB2Q96T68 719 aa13.7□□□□□ -0.22
KCNIP3-206ENST00000475491 RBM8AQ9Y5S9 174 aaKnown RBP13.7□□□□□ -0.22
KCNIP3-206ENST00000475491 GYG1P46976 350 aa13.69□□□□□ -0.22
KCNIP3-206ENST00000475491 CHAF1AQ13111 956 aaPredicted RBP13.69□□□□□ -0.22
KCNIP3-206ENST00000475491 CELF1Q92879 486 aaKnown RBP13.69□□□□□ -0.22
KCNIP3-206ENST00000475491 EVI5LQ96CN4 794 aa13.69□□□□□ -0.22
KCNIP3-206ENST00000475491 COL15A1P39059 1388 aa13.69□□□□□ -0.22
KCNIP3-206ENST00000475491 APBA3O96018 575 aa13.69□□□□□ -0.22
KCNIP3-206ENST00000475491 KRT27Q7Z3Y8 459 aa13.69□□□□□ -0.22
KCNIP3-206ENST00000475491 SMARCC1Q92922 1105 aaPredicted RBP13.69□□□□□ -0.22
KCNIP3-206ENST00000475491 TRIM44Q96DX7 344 aaPredicted RBP13.69□□□□□ -0.22
KCNIP3-206ENST00000475491 PAG1Q9NWQ8 432 aa13.69□□□□□ -0.22
KCNIP3-206ENST00000475491 TOGARAM1Q9Y4F4 1720 aa13.69□□□□□ -0.22
KCNIP3-206ENST00000475491 PDE8AO60658 829 aa13.69□□□□□ -0.22
KCNIP3-206ENST00000475491 CCDC158Q5M9N0 1113 aa13.69□□□□□ -0.22
KCNIP3-206ENST00000475491 DDX49Q9Y6V7 483 aaKnown RBP13.68□□□□□ -0.22
KCNIP3-206ENST00000475491 MRC1P22897 1456 aa13.68□□□□□ -0.22
KCNIP3-206ENST00000475491 ERBB4Q15303 1308 aa13.68□□□□□ -0.22
KCNIP3-206ENST00000475491 KLRK1P26718 216 aa13.68□□□□□ -0.22
KCNIP3-206ENST00000475491 MIGA1Q8NAN2 632 aa13.68□□□□□ -0.22
KCNIP3-206ENST00000475491 INCENPQ9NQS7 918 aa13.68□□□□□ -0.22
KCNIP3-206ENST00000475491 PXDNLA1KZ92 1463 aa13.68□□□□□ -0.22
KCNIP3-206ENST00000475491 OLFM4Q6UX06 510 aa13.67□□□□□ -0.22
KCNIP3-206ENST00000475491 VPS37DQ86XT2 251 aa13.67□□□□□ -0.22
KCNIP3-206ENST00000475491 SNX14Q9Y5W7 946 aa13.67□□□□□ -0.22
KCNIP3-206ENST00000475491 SLIT2O94813 1529 aa13.67□□□□□ -0.22
KCNIP3-206ENST00000475491 TRAPPC3LQ5T215 181 aa13.67□□□□□ -0.22
KCNIP3-206ENST00000475491 TMX3Q96JJ7 454 aa13.67□□□□□ -0.22
KCNIP3-206ENST00000475491 TOMM22Q9NS69 142 aa13.67□□□□□ -0.22
KCNIP3-206ENST00000475491 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.67□□□□□ -0.22
KCNIP3-206ENST00000475491 PRPF40AO75400 957 aaKnown RBP13.67□□□□□ -0.22
KCNIP3-206ENST00000475491 ZNF34Q8IZ26 560 aa13.67□□□□□ -0.22
KCNIP3-206ENST00000475491 LSG1Q9H089 658 aaKnown RBP13.67□□□□□ -0.22
KCNIP3-206ENST00000475491 TTC41PQ6P2S7 1318 aa13.66□□□□□ -0.22
KCNIP3-206ENST00000475491 PARP4Q9UKK3 1724 aaKnown RBP13.66□□□□□ -0.22
KCNIP3-206ENST00000475491 IGHMBP2P38935 993 aaKnown RBP13.66□□□□□ -0.22
KCNIP3-206ENST00000475491 FBXW7Q969H0 707 aa13.66□□□□□ -0.22
KCNIP3-206ENST00000475491 GBP4Q96PP9 640 aa13.66□□□□□ -0.22
KCNIP3-206ENST00000475491 COL14A1Q05707 1796 aaKnown RBP13.66□□□□□ -0.22
KCNIP3-206ENST00000475491 CCDC83Q8IWF9 413 aa13.66□□□□□ -0.22
KCNIP3-206ENST00000475491 BCL2L12Q9HB09 334 aa13.66□□□□□ -0.22
KCNIP3-206ENST00000475491 AHDC1Q5TGY3 1603 aaPredicted RBP13.66□□□□□ -0.22
KCNIP3-206ENST00000475491 LARGE1O95461 756 aa13.66□□□□□ -0.22
KCNIP3-206ENST00000475491 SNX21Q969T3 373 aa13.66□□□□□ -0.22
KCNIP3-206ENST00000475491 MCAMP43121 646 aa13.65□□□□□ -0.22
KCNIP3-206ENST00000475491 PAXIP1Q6ZW49 1069 aaPredicted RBP13.65□□□□□ -0.22
KCNIP3-206ENST00000475491 RUFY2Q8WXA3 655 aa13.65□□□□□ -0.22
KCNIP3-206ENST00000475491 DENND2AQ9ULE3 1009 aa13.65□□□□□ -0.22
KCNIP3-206ENST00000475491 CACNA1FO60840 1977 aa13.65□□□□□ -0.22
KCNIP3-206ENST00000475491 PKD1L3Q7Z443 1732 aa13.65□□□□□ -0.22
KCNIP3-206ENST00000475491 HSP90B1P14625 803 aaKnown RBP13.65□□□□□ -0.22
KCNIP3-206ENST00000475491 GPHNQ9NQX3 736 aaPredicted RBP13.65□□□□□ -0.22
KCNIP3-206ENST00000475491 SIPA1L3O60292 1781 aaPredicted RBP13.65□□□□□ -0.22
KCNIP3-206ENST00000475491 SLC9C2Q5TAH2 1124 aa13.65□□□□□ -0.23
KCNIP3-206ENST00000475491 ZNF652Q9Y2D9 606 aa13.65□□□□□ -0.23
KCNIP3-206ENST00000475491 SPATA31A6Q5VVP1 1343 aa13.64□□□□□ -0.23
KCNIP3-206ENST00000475491 AK2P54819 239 aa13.64□□□□□ -0.23
KCNIP3-206ENST00000475491 CAVIN1Q6NZI2 390 aaKnown RBP13.64□□□□□ -0.23
KCNIP3-206ENST00000475491 CHRNDQ07001 517 aa13.64□□□□□ -0.23
KCNIP3-206ENST00000475491 CREB3L3Q68CJ9 461 aa13.64□□□□□ -0.23
KCNIP3-206ENST00000475491 CCDC102BQ68D86 513 aa13.64□□□□□ -0.23
KCNIP3-206ENST00000475491 RBM27Q9P2N5 1060 aaKnown RBP13.64□□□□□ -0.23
KCNIP3-206ENST00000475491 RIPOR2Q9Y4F9 1068 aa13.64□□□□□ -0.23
KCNIP3-206ENST00000475491 GOLGA6L3A6NEY3 463 aa13.63□□□□□ -0.23
KCNIP3-206ENST00000475491 M0R2C6 588 aa13.63□□□□□ -0.23
KCNIP3-206ENST00000475491 NTSR2O95665 410 aa13.63□□□□□ -0.23
KCNIP3-206ENST00000475491 ATP5JP18859 108 aa13.63□□□□□ -0.23
KCNIP3-206ENST00000475491 CCDC152Q4G0S7 254 aa13.63□□□□□ -0.23
KCNIP3-206ENST00000475491 OSBP2Q969R2 916 aa13.63□□□□□ -0.23
KCNIP3-206ENST00000475491 PUS7LQ9H0K6 701 aaKnown RBP13.63□□□□□ -0.23
KCNIP3-206ENST00000475491 ANKIB1Q9P2G1 1089 aa13.63□□□□□ -0.23
KCNIP3-206ENST00000475491 PPP1R1BQ9UD71 204 aaPredicted RBP13.63□□□□□ -0.23
KCNIP3-206ENST00000475491 MYH14Q7Z406 1995 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms